| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223939
Identifier: 212223939
GI number: 212223939
Start: 736795
End: 737433
Strand: Reverse
Name: 212223939
Synonym: TON_0790
Alternate gene names: NA
Gene position: 737433-736795 (Counterclockwise)
Preceding gene: 212223952
Following gene: 212223938
Centisome position: 39.91
GC content: 51.17
Gene sequence:
>639_bases ATGGAGTTTATAGCTTTCACCTACGTCGGGAACTTCGTGGACAAAGAAATAATAACCGACGTTCTATTCAACGTTTTCGA CGATGCAAACCGCTTCTTCCACCAGAATGAGATTCCCGTGAGGTTCCTCTACATAGGAAAACTTGAGCTGGAGCCGGGTT ACCTGATAAACCTCAACACACCGGAGGGCAGGATAAGGGTCTATCCGCTTGAGGCCCTCGTTGAGGTTCTCTACTCCAGA CTGCTCCAGGAAATCAACGAGAAAGAGGACATCAAAATGAACAAGATATTCGCCCTCACCACCTTTCCGCTCGTTTCTAG GAATCCTTACTTTGACTTCTACGAGAAGTTTCTGGGCATTCACGAGGTCATCACCGGCCTTAGGATTATGATACTGTCGA TGAAGCCCTTCGAGGTTCCTATAACCCCCGATGATTCTCCCCATGAGCGCAGGAGGAAGCTTGAGACGTTCAAAAGCAGG CTCCTCAAGGGTATCCTCCACGAGGTTGGGCACAGCTTCGGCCTTGAGCACTGCAACAACCAGTGTGTCATGCATCCCCC CACCAACATAGAGGACTGGGACGGCCGGATTCCAGGCTACTGCGACGAGTGCCTCCTCAAGCTGAGGGCCGCCTTGTAA
Upstream 100 bases:
>100_bases CATCGCCCGAAAAGCCATCAGAAAGGCGGTTAAAAACGTTTGTGGTTCAATCACCTAAAATTTAATAAGTTTGAAACGGT CTCTCATTTGTGGTGAAATC
Downstream 100 bases:
>100_bases AGGTAATCGACAAGTGTTTTAACTATGAGAACCTATTAGATGGTGATGTGGTTCAGGAGGATAGAGATTAGGGAAATTGA AGGGGCCATAAAGGCAATGC
Product: putative zinc-dependent protease
Products: NA
Alternate protein names: Peptidase Zinc-Dependent
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MEFIAFTYVGNFVDKEIITDVLFNVFDDANRFFHQNEIPVRFLYIGKLELEPGYLINLNTPEGRIRVYPLEALVEVLYSR LLQEINEKEDIKMNKIFALTTFPLVSRNPYFDFYEKFLGIHEVITGLRIMILSMKPFEVPITPDDSPHERRRKLETFKSR LLKGILHEVGHSFGLEHCNNQCVMHPPTNIEDWDGRIPGYCDECLLKLRAAL
Sequences:
>Translated_212_residues MEFIAFTYVGNFVDKEIITDVLFNVFDDANRFFHQNEIPVRFLYIGKLELEPGYLINLNTPEGRIRVYPLEALVEVLYSR LLQEINEKEDIKMNKIFALTTFPLVSRNPYFDFYEKFLGIHEVITGLRIMILSMKPFEVPITPDDSPHERRRKLETFKSR LLKGILHEVGHSFGLEHCNNQCVMHPPTNIEDWDGRIPGYCDECLLKLRAAL >Mature_212_residues MEFIAFTYVGNFVDKEIITDVLFNVFDDANRFFHQNEIPVRFLYIGKLELEPGYLINLNTPEGRIRVYPLEALVEVLYSR LLQEINEKEDIKMNKIFALTTFPLVSRNPYFDFYEKFLGIHEVITGLRIMILSMKPFEVPITPDDSPHERRRKLETFKSR LLKGILHEVGHSFGLEHCNNQCVMHPPTNIEDWDGRIPGYCDECLLKLRAAL
Specific function: Unknown
COG id: COG1913
COG function: function code R; Predicted Zn-dependent proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24839; Mature: 24839
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFIAFTYVGNFVDKEIITDVLFNVFDDANRFFHQNEIPVRFLYIGKLELEPGYLINLNT CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEECC PEGRIRVYPLEALVEVLYSRLLQEINEKEDIKMNKIFALTTFPLVSRNPYFDFYEKFLGI CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCCHHHHHHHHHH HEVITGLRIMILSMKPFEVPITPDDSPHERRRKLETFKSRLLKGILHEVGHSFGLEHCNN HHHHHHHHHHHEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC QCVMHPPTNIEDWDGRIPGYCDECLLKLRAAL CEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MEFIAFTYVGNFVDKEIITDVLFNVFDDANRFFHQNEIPVRFLYIGKLELEPGYLINLNT CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEECC PEGRIRVYPLEALVEVLYSRLLQEINEKEDIKMNKIFALTTFPLVSRNPYFDFYEKFLGI CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCCHHHHHHHHHH HEVITGLRIMILSMKPFEVPITPDDSPHERRRKLETFKSRLLKGILHEVGHSFGLEHCNN HHHHHHHHHHHEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC QCVMHPPTNIEDWDGRIPGYCDECLLKLRAAL CEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA