| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223931
Identifier: 212223931
GI number: 212223931
Start: 727480
End: 728091
Strand: Reverse
Name: 212223931
Synonym: TON_0782
Alternate gene names: NA
Gene position: 728091-727480 (Counterclockwise)
Preceding gene: 212223932
Following gene: 212223929
Centisome position: 39.41
GC content: 53.59
Gene sequence:
>612_bases ATGAGAACCTTCATCATCAAGGCGAACAAGGCACATACAAAAGCGGATTTCAAGCTCAAGGATCTTCCCGGGACAAGCGG CAGGATAGACCTCCTTTGCCGCGTGCTTAACTCTGCCTTTCTCCTCTCGCATGGCTTCAGAAAGAACGTCCGCGTGTGGC TGAGCCTCTACGGCCCGCCGAACCCGCCGAAGGCGATAAGGTTTGAGGGGCAGGGGATGAAGCCTAAAACACTCAATCCA GACGAGCTGAGTACGGCGAAGCTGATAATCAAAGCTCTGAAGGTCGGGGAAAATCTCCGCGAGCCGAGCAAAGAGATCCA GGTTCTCCCTGGGATTTATGTGAGCAATCTAACCTTTGAAGACATCATAAGGAGAACCCTGAAAGGTGCGACCCTCTACT ACCTCCATGAGGAGGGCAGGCCCATCGAGAGGGTGAACTTCTCCCAGAACGTCGCCTTCGTCCTCGGCGACCATGAAGGA TTAACTCCGGAGGATGAGGCCTTCCTTAGTGGGATAGCCGAAAAAGTGAGCATCGGGAGGAAAAGCTACCTTGCCTCCCA TGTCGTGGCCTACGTCAACATCTTTCTAGATTCCATCACTCCTCCGCCTTGA
Upstream 100 bases:
>100_bases CTCTGGACGTTGAAGTGAGAGGGCCAAAGATGCCGCAGTATGAATCTGCTCCGAAAACCCTTCGGGCAACGATTATAAGC TCCCGTCCAAATCCTCAACC
Downstream 100 bases:
>100_bases GCCTGAGAGATGTGTGCTCCTGCTTGAGCTCCTCCAGCTTCTCCAGTATTTTCTCGCTCATCTCTCTGAGCTGAAGGGTG AGCTCCTCGAGCTCCTTTAT
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MRTFIIKANKAHTKADFKLKDLPGTSGRIDLLCRVLNSAFLLSHGFRKNVRVWLSLYGPPNPPKAIRFEGQGMKPKTLNP DELSTAKLIIKALKVGENLREPSKEIQVLPGIYVSNLTFEDIIRRTLKGATLYYLHEEGRPIERVNFSQNVAFVLGDHEG LTPEDEAFLSGIAEKVSIGRKSYLASHVVAYVNIFLDSITPPP
Sequences:
>Translated_203_residues MRTFIIKANKAHTKADFKLKDLPGTSGRIDLLCRVLNSAFLLSHGFRKNVRVWLSLYGPPNPPKAIRFEGQGMKPKTLNP DELSTAKLIIKALKVGENLREPSKEIQVLPGIYVSNLTFEDIIRRTLKGATLYYLHEEGRPIERVNFSQNVAFVLGDHEG LTPEDEAFLSGIAEKVSIGRKSYLASHVVAYVNIFLDSITPPP >Mature_203_residues MRTFIIKANKAHTKADFKLKDLPGTSGRIDLLCRVLNSAFLLSHGFRKNVRVWLSLYGPPNPPKAIRFEGQGMKPKTLNP DELSTAKLIIKALKVGENLREPSKEIQVLPGIYVSNLTFEDIIRRTLKGATLYYLHEEGRPIERVNFSQNVAFVLGDHEG LTPEDEAFLSGIAEKVSIGRKSYLASHVVAYVNIFLDSITPPP
Specific function: Unknown
COG id: COG1901
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0217 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y782_THEON (B6YVU7)
Other databases:
- EMBL: CP000855 - RefSeq: YP_002307167.1 - ProteinModelPortal: B6YVU7 - GeneID: 7017085 - GenomeReviews: CP000855_GR - KEGG: ton:TON_0782 - HOGENOM: HBG508881 - OMA: YLASHCI - ProtClustDB: PRK02135 - HAMAP: MF_00587 - InterPro: IPR007158
Pfam domain/function: PF04013 DUF358
EC number: NA
Molecular weight: Translated: 22684; Mature: 22684
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFIIKANKAHTKADFKLKDLPGTSGRIDLLCRVLNSAFLLSHGFRKNVRVWLSLYGPP CCEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC NPPKAIRFEGQGMKPKTLNPDELSTAKLIIKALKVGENLREPSKEIQVLPGIYVSNLTFE CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHEECCCEEECCCCHH DIIRRTLKGATLYYLHEEGRPIERVNFSQNVAFVLGDHEGLTPEDEAFLSGIAEKVSIGR HHHHHHHCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH KSYLASHVVAYVNIFLDSITPPP HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRTFIIKANKAHTKADFKLKDLPGTSGRIDLLCRVLNSAFLLSHGFRKNVRVWLSLYGPP CCEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC NPPKAIRFEGQGMKPKTLNPDELSTAKLIIKALKVGENLREPSKEIQVLPGIYVSNLTFE CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHEECCCEEECCCCHH DIIRRTLKGATLYYLHEEGRPIERVNFSQNVAFVLGDHEGLTPEDEAFLSGIAEKVSIGR HHHHHHHCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH KSYLASHVVAYVNIFLDSITPPP HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA