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The map label for this gene is 212223914

Identifier: 212223914

GI number: 212223914

Start: 712627

End: 713331

Strand: Reverse

Name: 212223914

Synonym: TON_0765

Alternate gene names: NA

Gene position: 713331-712627 (Counterclockwise)

Preceding gene: 212223915

Following gene: 212223913

Centisome position: 38.61

GC content: 52.62

Gene sequence:

>705_bases
ATGGACGAGTTTGAGAGACTGCTCAAGAAGTACGAGCGCGTTGATAAGGACGGAAGACCCCTCAAGAACAATGAGGAAGA
GGAGATAACCTATGCCGCCCTGGGCGAGCAGGAGGAGTTCGTTAGGATTCCGAAGGACAGGGTGGCGGTTCTGATAGGAA
AGAAAGGGCGGACTAAGAAAGAGATAGAGAGACGCACGAAGACGAGAATCGAGGTAGACAGTGAGACTGGGGAGGTTTTC
ATCACCGCCACGAAGGATACAGACGATCCCTTAGCAGTCTGGAAGGCCCGCGATGTTGTTACCGCCATCGGTAGGGGCTT
CTCGCCAGAGAGGGCCTTCAGGCTCTTCAACGAGGGTGAGGTTCTTGAGGTAATCAACCTCACCGACATCATCATAGGCA
ACGACAAGAACGCTCTTCCGCGCGTTAGGGGAAGGATAATCGGTCGGAAGGGCAGAACAAGGGAGATAATAGAGGAAATG
AGCGGTGCCGACGTTAGCGTTTACGGAAAGACGGTAGCTATAATCGGCAACCCGATTCAGGTTGAGGTTGCCAAAACAGC
CATAGAAAAGCTCGCCAAGGGTTCGCCCCACGGGGTGGTTTACAAGTATCTTGAGAGGCGCAAGAAAGATTTGGAACTTG
AAAGCGTCACCTACTACGAGGCCCTTGGCGGCTCTGAAAACTTTGAAGGCTTTGAGGAGGAGTGA

Upstream 100 bases:

>100_bases
GAGACTTGAGGAACATCATCAATTACTTTGGTAAAAAGGGCGTTGATGTTGATGATTTCCACGAGAAGTTTAAGGAACTC
GTTGAGAGCGGGTGAGAGGT

Downstream 100 bases:

>100_bases
AAATGGCCGAGGCAAGTCAGCTGTTTAAGGAGTTCAAGATTCAGAGCGTCAGCGAGTTCTTCAGAAGAAACGCTGCAATG
CTCGGTTACACGGGCAAGAT

Product: putative RNA-processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDEFERLLKKYERVDKDGRPLKNNEEEEITYAALGEQEEFVRIPKDRVAVLIGKKGRTKKEIERRTKTRIEVDSETGEVF
ITATKDTDDPLAVWKARDVVTAIGRGFSPERAFRLFNEGEVLEVINLTDIIIGNDKNALPRVRGRIIGRKGRTREIIEEM
SGADVSVYGKTVAIIGNPIQVEVAKTAIEKLAKGSPHGVVYKYLERRKKDLELESVTYYEALGGSENFEGFEEE

Sequences:

>Translated_234_residues
MDEFERLLKKYERVDKDGRPLKNNEEEEITYAALGEQEEFVRIPKDRVAVLIGKKGRTKKEIERRTKTRIEVDSETGEVF
ITATKDTDDPLAVWKARDVVTAIGRGFSPERAFRLFNEGEVLEVINLTDIIIGNDKNALPRVRGRIIGRKGRTREIIEEM
SGADVSVYGKTVAIIGNPIQVEVAKTAIEKLAKGSPHGVVYKYLERRKKDLELESVTYYEALGGSENFEGFEEE
>Mature_234_residues
MDEFERLLKKYERVDKDGRPLKNNEEEEITYAALGEQEEFVRIPKDRVAVLIGKKGRTKKEIERRTKTRIEVDSETGEVF
ITATKDTDDPLAVWKARDVVTAIGRGFSPERAFRLFNEGEVLEVINLTDIIIGNDKNALPRVRGRIIGRKGRTREIIEEM
SGADVSVYGKTVAIIGNPIQVEVAKTAIEKLAKGSPHGVVYKYLERRKKDLELESVTYYEALGGSENFEGFEEE

Specific function: Unknown

COG id: COG1094

COG function: function code R; Predicted RNA-binding protein (contains KH domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 KH domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR019964
- InterPro:   IPR004088
- InterPro:   IPR018111 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 26564; Mature: 26564

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEFERLLKKYERVDKDGRPLKNNEEEEITYAALGEQEEFVRIPKDRVAVLIGKKGRTKK
CCHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCHHHHCCCCCCEEEEECCCCCCHH
EIERRTKTRIEVDSETGEVFITATKDTDDPLAVWKARDVVTAIGRGFSPERAFRLFNEGE
HHHHHHHHEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
VLEVINLTDIIIGNDKNALPRVRGRIIGRKGRTREIIEEMSGADVSVYGKTVAIIGNPIQ
EEEEEEEEEEEEECCCCCCHHHHHHEECCCCCHHHHHHHHCCCCEEEECCEEEEECCCEE
VEVAKTAIEKLAKGSPHGVVYKYLERRKKDLELESVTYYEALGGSENFEGFEEE
EHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDEFERLLKKYERVDKDGRPLKNNEEEEITYAALGEQEEFVRIPKDRVAVLIGKKGRTKK
CCHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCHHHHCCCCCCEEEEECCCCCCHH
EIERRTKTRIEVDSETGEVFITATKDTDDPLAVWKARDVVTAIGRGFSPERAFRLFNEGE
HHHHHHHHEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
VLEVINLTDIIIGNDKNALPRVRGRIIGRKGRTREIIEEMSGADVSVYGKTVAIIGNPIQ
EEEEEEEEEEEEECCCCCCHHHHHHEECCCCCHHHHHHHHCCCCEEEECCEEEEECCCEE
VEVAKTAIEKLAKGSPHGVVYKYLERRKKDLELESVTYYEALGGSENFEGFEEE
EHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]