Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223895

Identifier: 212223895

GI number: 212223895

Start: 694826

End: 695470

Strand: Reverse

Name: 212223895

Synonym: TON_0746

Alternate gene names: NA

Gene position: 695470-694826 (Counterclockwise)

Preceding gene: 212223896

Following gene: 212223892

Centisome position: 37.64

GC content: 51.94

Gene sequence:

>645_bases
ATGACGAGTCTTAATCAGCGCCAAGAGAACGATGGATTCCTGGAGTTTTACGCGAGCGAGGCCCTAACCTGCCCGAGAAG
GATATACTTTCGCCTGAAGGGCTACCCCGAGAAGTGGCCAGAGTTCGTTAGAGTGAGACTGAACCAGGGGATAAACACCC
ACAACGTGCTCGGTGAGATTTTAAAGAACCGCTTCGGCTTCGAGCTTGAGAAGCACATGATTCTCCGCTCCTCCAGGCTC
GGCTTCGAGATACACGGAAGGGTGGATGCTATAAGGGACTTTCCCATCGAAATCAAAGGCAAGACGAGTCTGCCGAGAGT
CCCATACGACTATCACCTTGCCCAGCTCAACATATATCTCCGCTGGGCTGAAGCCGAGTACGGCTATCTCTACTACATTA
AGCTCCACGAGGAGCCTATGAAAATTATCCGCAAAATCGACTTTTCCCGCTTCCCCATCGTCAAGGGGCCGAACTTTAGG
GCTTTTGAAGTGCCCTACGACGGCAAGCTGTTCCGCGAAACTCTCAAGCACTTCTACAACGTCAAGAGGCATTACGAAAA
AGGAAAGCCCCCCAAGGGCTGGAATGACTACGCCTGTAAATTCTGCCCGTATCGCTACCTCTGCTATTCGGACGGTGGAG
AGTAG

Upstream 100 bases:

>100_bases
CCCTTGCCCAGTCTGATGGGTGATGACGTCGGTATTAGCTGACGCAGGGGCGGCGAGGTTCGCGGGCCAATGACCCGCCC
TGTTTCCTGGAGGGACATAA

Downstream 100 bases:

>100_bases
TTGAGGGCCACAAAACTCACCCTTTCCTGACCTTCCACTTTAGCCCATTATCCACTGTTGCCTCTATTACACCCTCATTG
TAGAGCTTCGCCACAAAGGC

Product: predicted exonuclease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEILKNRFGFELEKHMILRSSRL
GFEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYLRWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFR
AFEVPYDGKLFRETLKHFYNVKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE

Sequences:

>Translated_214_residues
MTSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEILKNRFGFELEKHMILRSSRL
GFEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYLRWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFR
AFEVPYDGKLFRETLKHFYNVKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE
>Mature_213_residues
TSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEILKNRFGFELEKHMILRSSRLG
FEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYLRWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFRA
FEVPYDGKLFRETLKHFYNVKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25699; Mature: 25568

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEI
CCCCCCCCCCCCCEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH
LKNRFGFELEKHMILRSSRLGFEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYL
HHHHCCCCHHHHHHHHHCCCCEEEECCEEHHCCCCEEEECCCCCCCCCCCEEEEEEEEEE
RWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFRAFEVPYDGKLFRETLKHFYN
EEECCCCCEEEEEEECCCHHHHHHHCCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHH
VKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE
HHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCC
>Mature Secondary Structure 
TSLNQRQENDGFLEFYASEALTCPRRIYFRLKGYPEKWPEFVRVRLNQGINTHNVLGEI
CCCCCCCCCCCCEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH
LKNRFGFELEKHMILRSSRLGFEIHGRVDAIRDFPIEIKGKTSLPRVPYDYHLAQLNIYL
HHHHCCCCHHHHHHHHHCCCCEEEECCEEHHCCCCEEEECCCCCCCCCCCEEEEEEEEEE
RWAEAEYGYLYYIKLHEEPMKIIRKIDFSRFPIVKGPNFRAFEVPYDGKLFRETLKHFYN
EEECCCCCEEEEEEECCCHHHHHHHCCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHH
VKRHYEKGKPPKGWNDYACKFCPYRYLCYSDGGE
HHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA