Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is cpgS

Identifier: 212223892

GI number: 212223892

Start: 692235

End: 693533

Strand: Reverse

Name: cpgS

Synonym: TON_0743

Alternate gene names: 212223892

Gene position: 693533-692235 (Counterclockwise)

Preceding gene: 212223895

Following gene: 212223891

Centisome position: 37.54

GC content: 54.35

Gene sequence:

>1299_bases
ATGAAGCTGGTCTTGATTGACGGCGAGCACTATCCTGACGTCATCTCATGGGCGATAAAAAAACTTGGTGACGTCTGTTG
TGCCGTTTTCCTGGGTGGAAGTGAGAAGATTGGGAGCATTGGGGAAGTTGAGAGAAAGATTGGGGTTAAAGTTTATCACT
CACCCAACTATCTCGACGCCCTCAGAAGGGCTCTGGAGGAGAACAAGGTCGACGAGGTTGTCGACTTAAGCGATGAGCCC
GTCCTCAACTATGAAGACCGCTTTAGGATTGCTTCACTGTGCATGCTCTATGGTGTGTCCTACCGGGGAGCGGATTTCCA
CTTCAAGCCAAAACCGCTCAAAAAAACCAAAAAGCCGAGCCTGGCCGTTATAGGTACGGGCAAGAGGGTTGGGAAAACAG
CCGTGAGTGGCTTCATCGCGAGAACTCTGAAAGAGATAGCAAAGCCTGTGATAGTTACCATGGGCCGCGGCGGCCCTGAA
GAGCCCGAACTGATAGAGGGCGATAAGTTCGAAATAACTCCCGAGTTTTTGCTCAAGTTTGCCGAGAGTGGAAAACACGC
CGCCTCCGACCACTTCGAGGATGCGTTAACCTCACGCGTAACAACCATTGGCTGTAGAAGATGCGGTGGTGGAATGGCCG
GCTTTCCTTTCTTCGACGTGGTGGATGAGGGTGTGAAGCTTGCCGAGAACTTGCCCAACGATTTAATAATCCTCGAGGGC
AGCGGGGCGACGTTTCCCCCTTACAGGGCGGATAGATACGTTGTCGTGGTGGGCGCCAAGCAAAAGCTCGACTTCGTCAG
GGGATACTTCGGTACCTTCAGGGTCTCACTGGCGGATATAGTGGTTGTTACGATGGCTGATTCCGTGGGCGAAGAGAGGT
GGAAAGCCCTGAGAGATGCCATACTGGAGATCAACCCCGATGTTGACCTGCACTTCATTGCCTTCCGCCCGAGGCCACTC
GGTAATGTTTCAGACAAACGGCTCGGCCTGGTGATGACTTCCAGTGAGGCCCTGCCAAAGGCGAAGAAACATCTCGAAGG
GCTCGGTGCAGAGGTGCCCTACACCTCGGACAACCTTTCGAAGAGACCCCTCCTCTGGAGGGACCTCGAGGGCTTTAGAG
GCATAGATGCAGTCGCAGTTGAGCTCAAAGCCGCCGCCGTTGATGTGGTGACGAGATGGGCACTGGAGCAGGGAATCGAA
GTCATTTACCTCGACAACGAGCCCGTCAACATCGATGGAAAAGACCTGAGGAAGGCCGTTCTTGAGCTCGGCCGCGCCCT
GCTGGGGGGGAGAGCATGA

Upstream 100 bases:

>100_bases
ATGGTGTTTTGAAGGTTTATAATCCTTCCTGGGAACTCCCAAGAAACTCTTCCCTGGCAAAGGTTAAAATCCCCTTGGTT
TAACTGAGTACGGTGATGGT

Downstream 100 bases:

>100_bases
TAATCGTGACAGATCCCGAGAGGAAGATACGCCTCCCCTTTTCGAGGGGCATACTGACGCGCTCTATAACACTCGCCGGG
GTTGACGTTGGAATAGCCTA

Product: cyclic 2,3-diphospoglycerate synthetase

Products: NA

Alternate protein names: cDPGS

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDALRRALEENKVDEVVDLSDEP
VLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPSLAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPE
EPELIEGDKFEITPEFLLKFAESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG
SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDAILEINPDVDLHFIAFRPRPL
GNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLSKRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIE
VIYLDNEPVNIDGKDLRKAVLELGRALLGGRA

Sequences:

>Translated_432_residues
MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDALRRALEENKVDEVVDLSDEP
VLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPSLAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPE
EPELIEGDKFEITPEFLLKFAESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG
SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDAILEINPDVDLHFIAFRPRPL
GNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLSKRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIE
VIYLDNEPVNIDGKDLRKAVLELGRALLGGRA
>Mature_432_residues
MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDALRRALEENKVDEVVDLSDEP
VLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPSLAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPE
EPELIEGDKFEITPEFLLKFAESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG
SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDAILEINPDVDLHFIAFRPRPL
GNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLSKRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIE
VIYLDNEPVNIDGKDLRKAVLELGRALLGGRA

Specific function: Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP

COG id: COG2403

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cyclic 2,3-diphosphoglycerate synthetase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPGS_THEON (B6YVF3)

Other databases:

- EMBL:   CP000855
- RefSeq:   YP_002307128.1
- GeneID:   7017045
- GenomeReviews:   CP000855_GR
- KEGG:   ton:TON_0743
- HOGENOM:   HBG539597
- OMA:   LIDGEHY
- ProtClustDB:   CLSK785466
- GO:   GO:0005737
- HAMAP:   MF_01908
- InterPro:   IPR016557
- PIRSF:   PIRSF009445

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47469; Mature: 47469

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDA
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCEEEEECCCHHHH
LRRALEENKVDEVVDLSDEPVLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPS
HHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
LAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPEEPELIEGDKFEITPEFLLKF
EEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECHHHHHHH
AESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDA
CCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHH
ILEINPDVDLHFIAFRPRPLGNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLS
HHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
KRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIEVIYLDNEPVNIDGKDLRKAV
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH
LELGRALLGGRA
HHHHHHHHCCCC
>Mature Secondary Structure
MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDA
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCEEEEECCCHHHH
LRRALEENKVDEVVDLSDEPVLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPS
HHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
LAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPEEPELIEGDKFEITPEFLLKF
EEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECHHHHHHH
AESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDA
CCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHH
ILEINPDVDLHFIAFRPRPLGNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLS
HHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
KRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIEVIYLDNEPVNIDGKDLRKAV
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH
LELGRALLGGRA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA