| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is cpgS
Identifier: 212223892
GI number: 212223892
Start: 692235
End: 693533
Strand: Reverse
Name: cpgS
Synonym: TON_0743
Alternate gene names: 212223892
Gene position: 693533-692235 (Counterclockwise)
Preceding gene: 212223895
Following gene: 212223891
Centisome position: 37.54
GC content: 54.35
Gene sequence:
>1299_bases ATGAAGCTGGTCTTGATTGACGGCGAGCACTATCCTGACGTCATCTCATGGGCGATAAAAAAACTTGGTGACGTCTGTTG TGCCGTTTTCCTGGGTGGAAGTGAGAAGATTGGGAGCATTGGGGAAGTTGAGAGAAAGATTGGGGTTAAAGTTTATCACT CACCCAACTATCTCGACGCCCTCAGAAGGGCTCTGGAGGAGAACAAGGTCGACGAGGTTGTCGACTTAAGCGATGAGCCC GTCCTCAACTATGAAGACCGCTTTAGGATTGCTTCACTGTGCATGCTCTATGGTGTGTCCTACCGGGGAGCGGATTTCCA CTTCAAGCCAAAACCGCTCAAAAAAACCAAAAAGCCGAGCCTGGCCGTTATAGGTACGGGCAAGAGGGTTGGGAAAACAG CCGTGAGTGGCTTCATCGCGAGAACTCTGAAAGAGATAGCAAAGCCTGTGATAGTTACCATGGGCCGCGGCGGCCCTGAA GAGCCCGAACTGATAGAGGGCGATAAGTTCGAAATAACTCCCGAGTTTTTGCTCAAGTTTGCCGAGAGTGGAAAACACGC CGCCTCCGACCACTTCGAGGATGCGTTAACCTCACGCGTAACAACCATTGGCTGTAGAAGATGCGGTGGTGGAATGGCCG GCTTTCCTTTCTTCGACGTGGTGGATGAGGGTGTGAAGCTTGCCGAGAACTTGCCCAACGATTTAATAATCCTCGAGGGC AGCGGGGCGACGTTTCCCCCTTACAGGGCGGATAGATACGTTGTCGTGGTGGGCGCCAAGCAAAAGCTCGACTTCGTCAG GGGATACTTCGGTACCTTCAGGGTCTCACTGGCGGATATAGTGGTTGTTACGATGGCTGATTCCGTGGGCGAAGAGAGGT GGAAAGCCCTGAGAGATGCCATACTGGAGATCAACCCCGATGTTGACCTGCACTTCATTGCCTTCCGCCCGAGGCCACTC GGTAATGTTTCAGACAAACGGCTCGGCCTGGTGATGACTTCCAGTGAGGCCCTGCCAAAGGCGAAGAAACATCTCGAAGG GCTCGGTGCAGAGGTGCCCTACACCTCGGACAACCTTTCGAAGAGACCCCTCCTCTGGAGGGACCTCGAGGGCTTTAGAG GCATAGATGCAGTCGCAGTTGAGCTCAAAGCCGCCGCCGTTGATGTGGTGACGAGATGGGCACTGGAGCAGGGAATCGAA GTCATTTACCTCGACAACGAGCCCGTCAACATCGATGGAAAAGACCTGAGGAAGGCCGTTCTTGAGCTCGGCCGCGCCCT GCTGGGGGGGAGAGCATGA
Upstream 100 bases:
>100_bases ATGGTGTTTTGAAGGTTTATAATCCTTCCTGGGAACTCCCAAGAAACTCTTCCCTGGCAAAGGTTAAAATCCCCTTGGTT TAACTGAGTACGGTGATGGT
Downstream 100 bases:
>100_bases TAATCGTGACAGATCCCGAGAGGAAGATACGCCTCCCCTTTTCGAGGGGCATACTGACGCGCTCTATAACACTCGCCGGG GTTGACGTTGGAATAGCCTA
Product: cyclic 2,3-diphospoglycerate synthetase
Products: NA
Alternate protein names: cDPGS
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDALRRALEENKVDEVVDLSDEP VLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPSLAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPE EPELIEGDKFEITPEFLLKFAESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDAILEINPDVDLHFIAFRPRPL GNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLSKRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIE VIYLDNEPVNIDGKDLRKAVLELGRALLGGRA
Sequences:
>Translated_432_residues MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDALRRALEENKVDEVVDLSDEP VLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPSLAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPE EPELIEGDKFEITPEFLLKFAESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDAILEINPDVDLHFIAFRPRPL GNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLSKRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIE VIYLDNEPVNIDGKDLRKAVLELGRALLGGRA >Mature_432_residues MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDALRRALEENKVDEVVDLSDEP VLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPSLAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPE EPELIEGDKFEITPEFLLKFAESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDAILEINPDVDLHFIAFRPRPL GNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLSKRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIE VIYLDNEPVNIDGKDLRKAVLELGRALLGGRA
Specific function: Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP
COG id: COG2403
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclic 2,3-diphosphoglycerate synthetase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CPGS_THEON (B6YVF3)
Other databases:
- EMBL: CP000855 - RefSeq: YP_002307128.1 - GeneID: 7017045 - GenomeReviews: CP000855_GR - KEGG: ton:TON_0743 - HOGENOM: HBG539597 - OMA: LIDGEHY - ProtClustDB: CLSK785466 - GO: GO:0005737 - HAMAP: MF_01908 - InterPro: IPR016557 - PIRSF: PIRSF009445
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47469; Mature: 47469
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDA CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCEEEEECCCHHHH LRRALEENKVDEVVDLSDEPVLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPS HHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC LAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPEEPELIEGDKFEITPEFLLKF EEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECHHHHHHH AESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDA CCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHH ILEINPDVDLHFIAFRPRPLGNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLS HHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC KRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIEVIYLDNEPVNIDGKDLRKAV CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH LELGRALLGGRA HHHHHHHHCCCC >Mature Secondary Structure MKLVLIDGEHYPDVISWAIKKLGDVCCAVFLGGSEKIGSIGEVERKIGVKVYHSPNYLDA CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCEEEEECCCHHHH LRRALEENKVDEVVDLSDEPVLNYEDRFRIASLCMLYGVSYRGADFHFKPKPLKKTKKPS HHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC LAVIGTGKRVGKTAVSGFIARTLKEIAKPVIVTMGRGGPEEPELIEGDKFEITPEFLLKF EEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECHHHHHHH AESGKHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDVVDEGVKLAENLPNDLIILEG HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC SGATFPPYRADRYVVVVGAKQKLDFVRGYFGTFRVSLADIVVVTMADSVGEERWKALRDA CCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHH ILEINPDVDLHFIAFRPRPLGNVSDKRLGLVMTSSEALPKAKKHLEGLGAEVPYTSDNLS HHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC KRPLLWRDLEGFRGIDAVAVELKAAAVDVVTRWALEQGIEVIYLDNEPVNIDGKDLRKAV CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH LELGRALLGGRA HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA