| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is dys [H]
Identifier: 212223850
GI number: 212223850
Start: 654076
End: 655083
Strand: Reverse
Name: dys [H]
Synonym: TON_0701
Alternate gene names: 212223850
Gene position: 655083-654076 (Counterclockwise)
Preceding gene: 212223851
Following gene: 212223849
Centisome position: 35.46
GC content: 54.56
Gene sequence:
>1008_bases ATGACCGAGCCAAAAGATATAGTCCTCAAGGAATCGGAAGAGATTGAGGGAACGCCCATCGAGGGGCCGTGGCTGGATGA AGTGAGGATCCTTGAAGAGGTCATCGATTACTATCACCGCATAGGCTTCCAGGCGACTCACCTTGGAAGGGCCATCGAAA TATGGAAAAAGGTGGAGGAAAAGCGCGCCAGCGGCGAAGAGGTCAGGGTCTTCCTCGGCTACACTTCCAACATAGTCTCT TCTGGCCTCAGAGAGCTGATAGCATGGCTGGTCAAGGAGGGCAAGGTGGACGTCATCGTAACAACGGCCGGCGGCGTTGA GGAGGACTTCATAAAGGCCCTAAAGCCGTTCATTCTGGGCGACTGGTACGTCAACGACGCGGAGATGAGAGAGAAGGGCA TAAACAGAATAGGCAACATCTTCGTGCCCAACGACAGGTACATTGAATTCGAGAAGTACATGATACCCTTCTTCGAACGG GTTCTTGAGATGGAAAAGGAGCGCGGGAAGCCGCTGACGGCGAGCGAGTTCATCTACGAGATGGGCCGCTTCATGGACGA AAAGCTCGGGAAGGAGAAGGAGCGCTCGATAATCTACTGGGCCTACAAGCGGAACGTCCCGATATTCTGCCCTGCTATAA CCGACGGCTCAATAGGGGACATGCTCTACTTCTTCAAGGAGGAGCGCGGAGACAGGGAGCTTATCATAGACGTAGCCAAC GACATCGTGAAGCTTAACAACCTGGCTGTCACAGCGAAGGAAACCGCTTCGATAATCCTTGGAGGTTCCCTGCCGAAGCA TGCAATAATAAACGCCAACCTCTTCAGAGGAGGAACGGACTACGCGATATACGTCACCACTGCCATTCCCTGGGATGGCT CGCTTAGCGGCGCGCCGCCGAGCGAAGGAGTGAGCTGGGGCAAGATAAGGGCTAAGGCTGACTACGTCGAGATATGGGCC GATGCGACGCTCGTCTTTCCGGTGCTGGTGTGGAAGGTGATGCGCTGA
Upstream 100 bases:
>100_bases GCAGGGTCTTTCCCGTTGCTATGACCGGCAGGCTCATAGCGGAGGTTCTCAGCGGTAAGTGCTGAGCAAAGTTTATACGC CCTCCCCTGAACCCACTATC
Downstream 100 bases:
>100_bases CATTTTGTTCTTTTCTCTGAACAATATGCACGCATATCGTCCCCGCGTGAGGACAAGATTTATAAATAAAGAATCCAACT TCAAAACATGGACGAGAGGA
Product: putative deoxyhypusine synthase
Products: NA
Alternate protein names: DHS [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTEPKDIVLKESEEIEGTPIEGPWLDEVRILEEVIDYYHRIGFQATHLGRAIEIWKKVEEKRASGEEVRVFLGYTSNIVS SGLRELIAWLVKEGKVDVIVTTAGGVEEDFIKALKPFILGDWYVNDAEMREKGINRIGNIFVPNDRYIEFEKYMIPFFER VLEMEKERGKPLTASEFIYEMGRFMDEKLGKEKERSIIYWAYKRNVPIFCPAITDGSIGDMLYFFKEERGDRELIIDVAN DIVKLNNLAVTAKETASIILGGSLPKHAIINANLFRGGTDYAIYVTTAIPWDGSLSGAPPSEGVSWGKIRAKADYVEIWA DATLVFPVLVWKVMR
Sequences:
>Translated_335_residues MTEPKDIVLKESEEIEGTPIEGPWLDEVRILEEVIDYYHRIGFQATHLGRAIEIWKKVEEKRASGEEVRVFLGYTSNIVS SGLRELIAWLVKEGKVDVIVTTAGGVEEDFIKALKPFILGDWYVNDAEMREKGINRIGNIFVPNDRYIEFEKYMIPFFER VLEMEKERGKPLTASEFIYEMGRFMDEKLGKEKERSIIYWAYKRNVPIFCPAITDGSIGDMLYFFKEERGDRELIIDVAN DIVKLNNLAVTAKETASIILGGSLPKHAIINANLFRGGTDYAIYVTTAIPWDGSLSGAPPSEGVSWGKIRAKADYVEIWA DATLVFPVLVWKVMR >Mature_334_residues TEPKDIVLKESEEIEGTPIEGPWLDEVRILEEVIDYYHRIGFQATHLGRAIEIWKKVEEKRASGEEVRVFLGYTSNIVSS GLRELIAWLVKEGKVDVIVTTAGGVEEDFIKALKPFILGDWYVNDAEMREKGINRIGNIFVPNDRYIEFEKYMIPFFERV LEMEKERGKPLTASEFIYEMGRFMDEKLGKEKERSIIYWAYKRNVPIFCPAITDGSIGDMLYFFKEERGDRELIIDVAND IVKLNNLAVTAKETASIILGGSLPKHAIINANLFRGGTDYAIYVTTAIPWDGSLSGAPPSEGVSWGKIRAKADYVEIWAD ATLVFPVLVWKVMR
Specific function: Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine
COG id: COG1899
COG function: function code O; Deoxyhypusine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoxyhypusine synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503325, Length=343, Percent_Identity=42.8571428571429, Blast_Score=275, Evalue=6e-74, Organism=Homo sapiens, GI7108338, Length=343, Percent_Identity=36.1516034985423, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI7108340, Length=343, Percent_Identity=34.1107871720117, Blast_Score=187, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17536927, Length=318, Percent_Identity=43.7106918238994, Blast_Score=274, Evalue=6e-74, Organism=Saccharomyces cerevisiae, GI6321859, Length=362, Percent_Identity=39.7790055248619, Blast_Score=266, Evalue=3e-72, Organism=Drosophila melanogaster, GI45550569, Length=352, Percent_Identity=44.3181818181818, Blast_Score=286, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002773 - InterPro: IPR022899 [H]
Pfam domain/function: PF01916 DS [H]
EC number: =2.5.1.46 [H]
Molecular weight: Translated: 38173; Mature: 38042
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPKDIVLKESEEIEGTPIEGPWLDEVRILEEVIDYYHRIGFQATHLGRAIEIWKKVEE CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KRASGEEVRVFLGYTSNIVSSGLRELIAWLVKEGKVDVIVTTAGGVEEDFIKALKPFILG HHCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCC DWYVNDAEMREKGINRIGNIFVPNDRYIEFEKYMIPFFERVLEMEKERGKPLTASEFIYE CEEECHHHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MGRFMDEKLGKEKERSIIYWAYKRNVPIFCPAITDGSIGDMLYFFKEERGDRELIIDVAN HHHHHHHHHCCHHHCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEHHH DIVKLNNLAVTAKETASIILGGSLPKHAIINANLFRGGTDYAIYVTTAIPWDGSLSGAPP HHHHHCCEEEEECCCEEEEECCCCCCCEEEECEEECCCCCEEEEEEEECCCCCCCCCCCC SEGVSWGKIRAKADYVEIWADATLVFPVLVWKVMR CCCCCCCEEEECCCEEEEHHCHHHHHHHHHHHHCC >Mature Secondary Structure TEPKDIVLKESEEIEGTPIEGPWLDEVRILEEVIDYYHRIGFQATHLGRAIEIWKKVEE CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KRASGEEVRVFLGYTSNIVSSGLRELIAWLVKEGKVDVIVTTAGGVEEDFIKALKPFILG HHCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCC DWYVNDAEMREKGINRIGNIFVPNDRYIEFEKYMIPFFERVLEMEKERGKPLTASEFIYE CEEECHHHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MGRFMDEKLGKEKERSIIYWAYKRNVPIFCPAITDGSIGDMLYFFKEERGDRELIIDVAN HHHHHHHHHCCHHHCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEHHH DIVKLNNLAVTAKETASIILGGSLPKHAIINANLFRGGTDYAIYVTTAIPWDGSLSGAPP HHHHHCCEEEEECCCEEEEECCCCCCCEEEECEEECCCCCEEEEEEEECCCCCCCCCCCC SEGVSWGKIRAKADYVEIWADATLVFPVLVWKVMR CCCCCCCEEEECCCEEEEHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA