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The map label for this gene is yggU [C]

Identifier: 212223789

GI number: 212223789

Start: 598786

End: 599070

Strand: Reverse

Name: yggU [C]

Synonym: TON_0641

Alternate gene names: 212223789

Gene position: 599070-598786 (Counterclockwise)

Preceding gene: 212223790

Following gene: 212223788

Centisome position: 32.42

GC content: 45.96

Gene sequence:

>285_bases
ATGAAGTTCATCAGGGAAACCAAGGACGGCGCTGTAATCCTGCTTTACGTCCAGCCAAAGGCGAAGAAGAACGAGATTGA
AGGCGTTGATGAGTGGCGTGGTAGGCTTAAAGTCAAAATCAAAGCCCCACCAGTGGAAGGAAAGGCGAATAAAGAAGTAG
TCAGGTTCTTCTCCAAGATGCTTGGGACTGAGGTCGAAATAATTCGGGGTGGAACTTCTCGTGAGAAAGATCTCCTGGTT
AAGGGTTTTTCCAGCAAAGAAGTCCTTAAAAAACTTGGACTCTAA

Upstream 100 bases:

>100_bases
TCGACTTCGCCTACCGCATCGCGAGGGAGATACTCGAAAAGCTTAAGCGTGGTGAGTTTCCACCGAAAATGGTCTGGGAG
TACAGGCTGGAGGGTCGGGA

Downstream 100 bases:

>100_bases
CGTCCAAGTCTGTTCTCTACTCTTTTTCAGGTACCAGTGGCGAACACCTTTTTTCAGAGCAACGCTTAAATTCATGAACC
TTTCTTCATCTCTCGGTGAT

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKFIRETKDGAVILLYVQPKAKKNEIEGVDEWRGRLKVKIKAPPVEGKANKEVVRFFSKMLGTEVEIIRGGTSREKDLLV
KGFSSKEVLKKLGL

Sequences:

>Translated_94_residues
MKFIRETKDGAVILLYVQPKAKKNEIEGVDEWRGRLKVKIKAPPVEGKANKEVVRFFSKMLGTEVEIIRGGTSREKDLLV
KGFSSKEVLKKLGL
>Mature_94_residues
MKFIRETKDGAVILLYVQPKAKKNEIEGVDEWRGRLKVKIKAPPVEGKANKEVVRFFSKMLGTEVEIIRGGTSREKDLLV
KGFSSKEVLKKLGL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y641_THEON (B6YUU2)

Other databases:

- EMBL:   CP000855
- RefSeq:   YP_002307025.1
- ProteinModelPortal:   B6YUU2
- GeneID:   7016940
- GenomeReviews:   CP000855_GR
- KEGG:   ton:TON_0641
- HOGENOM:   HBG472132
- OMA:   AKKNEIG
- ProtClustDB:   PRK04021
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10629; Mature: 10629

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIRETKDGAVILLYVQPKAKKNEIEGVDEWRGRLKVKIKAPPVEGKANKEVVRFFSKM
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
LGTEVEIIRGGTSREKDLLVKGFSSKEVLKKLGL
HCCEEEEEECCCCCCCCCEEECCCHHHHHHHHCC
>Mature Secondary Structure
MKFIRETKDGAVILLYVQPKAKKNEIEGVDEWRGRLKVKIKAPPVEGKANKEVVRFFSKM
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
LGTEVEIIRGGTSREKDLLVKGFSSKEVLKKLGL
HCCEEEEEECCCCCCCCCEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA