The gene/protein map for NC_011529 is currently unavailable.
Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212223776

Identifier: 212223776

GI number: 212223776

Start: 585844

End: 586728

Strand: Reverse

Name: 212223776

Synonym: TON_0628

Alternate gene names: NA

Gene position: 586728-585844 (Counterclockwise)

Preceding gene: 212223783

Following gene: 212223775

Centisome position: 31.76

GC content: 50.51

Gene sequence:

>885_bases
ATGAACATCGTCCAGATGCTCGCGCTCATAATCATCGGCTACGTCCTTAAGCTCGTCCTCAAGGATGAGAAGCCCTTCAA
CTACCTTAGAATCCTTGTAAATGACTTTCTCCTGGCCCTCTTTATCTTCGGCAACGTGGCAAGCAAGGATCTAGCCTATC
TCCTCAGCATAAAGACAGTTTTTATGTACGTGTTCATTATCGTTGGTCTCAGTCTGAGTCTCTCCTATCTCTACGGCCGC
CTCTTCTTGAAAAGCGACGAGCTGTGGGCAGGTGCGCTGATGGTGCTTTCCATCTATCCGAACACCGCTGCCCTTGGCTT
CCCCATAGCGAGCCTTTTCCTTGACGACATAACGCCGGCGATACTATACTCCACCACCAACTCTATGATAGTGCTTCCAA
TCGTTACCTTCATAGCCGCCCACTACTCCAGCGGCGGAGCCTCGGTGAAGAAGAGCTTTCTAAAGGCCCTTAAGTTCCCC
CCGACTATGGCAAACCTGCTCGCCCTGGGGCTTGTGATAGCAGGAGTGAGAGTTCCTGATGTCATCCTTGAACCGATAAA
AACCATTGGCTGGTGGAGCATCCCGTTGCTTCTCATCTACTTCGGATCGAGGATTACCTTCAGCCGCTTTGAGGTGAGGA
AGCTCTTGGAAGTTGGAACGTTCAGAATAGTTGTGCCCTTCCTGTTCGTGTTCCTTACTCTGCACTTTGCTAGTAAAGAC
ATCTTCTACTCTGTTCTTGTCGAAGCCTCGATGCCGCCAGCAATAGCGGCCAACGCTATTCTGGCACAGTATAAGCTCAA
AGCGGAGGAGGCAATAAGCGTGACTTTTGTACTGACATTGACAGCTATCGGGCTCTTCATGGTTCTTAGGGCACTCGGGG
TCTGA

Upstream 100 bases:

>100_bases
GTAGTACAATTCTCTGTACTTAGCTAGTTCGTTTAGTATATAAAAATTTATCGATTCAATATGCCAAAAACGTTTTAACG
CTCAAATCTAAATCGTCTCC

Downstream 100 bases:

>100_bases
GGACCTCCAGTGGGGTTTTAAATCTCAGCGATGAATCTCCAGCGGTGATTAATATGGAGAGAGTCGTTAGGATACTCAAG
GAGATTCTGGAGATACCTTC

Product: predicted permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNIVQMLALIIIGYVLKLVLKDEKPFNYLRILVNDFLLALFIFGNVASKDLAYLLSIKTVFMYVFIIVGLSLSLSYLYGR
LFLKSDELWAGALMVLSIYPNTAALGFPIASLFLDDITPAILYSTTNSMIVLPIVTFIAAHYSSGGASVKKSFLKALKFP
PTMANLLALGLVIAGVRVPDVILEPIKTIGWWSIPLLLIYFGSRITFSRFEVRKLLEVGTFRIVVPFLFVFLTLHFASKD
IFYSVLVEASMPPAIAANAILAQYKLKAEEAISVTFVLTLTAIGLFMVLRALGV

Sequences:

>Translated_294_residues
MNIVQMLALIIIGYVLKLVLKDEKPFNYLRILVNDFLLALFIFGNVASKDLAYLLSIKTVFMYVFIIVGLSLSLSYLYGR
LFLKSDELWAGALMVLSIYPNTAALGFPIASLFLDDITPAILYSTTNSMIVLPIVTFIAAHYSSGGASVKKSFLKALKFP
PTMANLLALGLVIAGVRVPDVILEPIKTIGWWSIPLLLIYFGSRITFSRFEVRKLLEVGTFRIVVPFLFVFLTLHFASKD
IFYSVLVEASMPPAIAANAILAQYKLKAEEAISVTFVLTLTAIGLFMVLRALGV
>Mature_294_residues
MNIVQMLALIIIGYVLKLVLKDEKPFNYLRILVNDFLLALFIFGNVASKDLAYLLSIKTVFMYVFIIVGLSLSLSYLYGR
LFLKSDELWAGALMVLSIYPNTAALGFPIASLFLDDITPAILYSTTNSMIVLPIVTFIAAHYSSGGASVKKSFLKALKFP
PTMANLLALGLVIAGVRVPDVILEPIKTIGWWSIPLLLIYFGSRITFSRFEVRKLLEVGTFRIVVPFLFVFLTLHFASKD
IFYSVLVEASMPPAIAANAILAQYKLKAEEAISVTFVLTLTAIGLFMVLRALGV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32508; Mature: 32508

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVQMLALIIIGYVLKLVLKDEKPFNYLRILVNDFLLALFIFGNVASKDLAYLLSIKTV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
FMYVFIIVGLSLSLSYLYGRLFLKSDELWAGALMVLSIYPNTAALGFPIASLFLDDITPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCHH
ILYSTTNSMIVLPIVTFIAAHYSSGGASVKKSFLKALKFPPTMANLLALGLVIAGVRVPD
HEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH
VILEPIKTIGWWSIPLLLIYFGSRITFSRFEVRKLLEVGTFRIVVPFLFVFLTLHFASKD
HHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFYSVLVEASMPPAIAANAILAQYKLKAEEAISVTFVLTLTAIGLFMVLRALGV
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIVQMLALIIIGYVLKLVLKDEKPFNYLRILVNDFLLALFIFGNVASKDLAYLLSIKTV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
FMYVFIIVGLSLSLSYLYGRLFLKSDELWAGALMVLSIYPNTAALGFPIASLFLDDITPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCHH
ILYSTTNSMIVLPIVTFIAAHYSSGGASVKKSFLKALKFPPTMANLLALGLVIAGVRVPD
HEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH
VILEPIKTIGWWSIPLLLIYFGSRITFSRFEVRKLLEVGTFRIVVPFLFVFLTLHFASKD
HHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFYSVLVEASMPPAIAANAILAQYKLKAEEAISVTFVLTLTAIGLFMVLRALGV
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA