| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223783
Identifier: 212223783
GI number: 212223783
Start: 591326
End: 591841
Strand: Reverse
Name: 212223783
Synonym: TON_0635
Alternate gene names: NA
Gene position: 591841-591326 (Counterclockwise)
Preceding gene: 212223785
Following gene: 212223776
Centisome position: 32.03
GC content: 51.55
Gene sequence:
>516_bases ATGCCAATAACGACCAAAACCGGTGATAAGGGTTTAACAGGCCTCTTTACAGGCGACAGAATTGCGAAGTACTCACCCAT AATGGAAGCTAACGGCACCATAGACGAGCTGAGCAGCTTTCTGGGCGAGGCCAAACACTACGTGCCCAAAGAGATGGCAG AGGTACTAGAAAAAATCCAGGTCGAGCTTTACTCGCTCATGGCTGAGATAGCCAGTAAGGGCAAGTACAAAAAGGTCGGG GAAGGGGAAGTCAAGTGGCTTGAGGAACTTATTCATAAGTATGAAGAAGAAGTCCAGCTCCGCGCCTTCGTCCTGCCGGG CTCCACCATCGCCAGCGCCAAGCTCGATGTGTGCAGGACAGTTGCAAGGAGGGCCGAGAGGGCCGTTGCACGGCTCGTTC TTGATTACGGCTTTGGAAGCAGCGCCCTCATCTACCTTAATAGGCTCAGCGACCTGTTATTCATAATGGCACGGGCAATA GAAAAGAGGGAGGGAAAGATAAAAGAGGTCAAGTAG
Upstream 100 bases:
>100_bases AAGTTTTTCCATAACTTACTCCGACAATTTATCACTCACCGTGTTCAGAAATTCCGAAATTAATAAAACTTGGTCACACA ATACCCACCTCGGTGATCCC
Downstream 100 bases:
>100_bases CTCTCTCCGCTTCAGCTCTCTCCGTATTTTTGCTCCCTGAGTAGGGTCTCCCTGTGCTCGATGTAGTAGTAGAGTATCAC GGCCCCCATCATAATCCAAA
Product: cobalamin adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase; ORFW [H]
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPITTKTGDKGLTGLFTGDRIAKYSPIMEANGTIDELSSFLGEAKHYVPKEMAEVLEKIQVELYSLMAEIASKGKYKKVG EGEVKWLEELIHKYEEEVQLRAFVLPGSTIASAKLDVCRTVARRAERAVARLVLDYGFGSSALIYLNRLSDLLFIMARAI EKREGKIKEVK
Sequences:
>Translated_171_residues MPITTKTGDKGLTGLFTGDRIAKYSPIMEANGTIDELSSFLGEAKHYVPKEMAEVLEKIQVELYSLMAEIASKGKYKKVG EGEVKWLEELIHKYEEEVQLRAFVLPGSTIASAKLDVCRTVARRAERAVARLVLDYGFGSSALIYLNRLSDLLFIMARAI EKREGKIKEVK >Mature_170_residues PITTKTGDKGLTGLFTGDRIAKYSPIMEANGTIDELSSFLGEAKHYVPKEMAEVLEKIQVELYSLMAEIASKGKYKKVGE GEVKWLEELIHKYEEEVQLRAFVLPGSTIASAKLDVCRTVARRAERAVARLVLDYGFGSSALIYLNRLSDLLFIMARAIE KREGKIKEVK
Specific function: Unknown
COG id: COG2096
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI16418349, Length=180, Percent_Identity=39.4444444444444, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI115534154, Length=166, Percent_Identity=34.3373493975904, Blast_Score=86, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017858 - InterPro: IPR002779 - InterPro: IPR016030 - ProDom: PD007457 [H]
Pfam domain/function: PF01923 Cob_adeno_trans [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 19130; Mature: 18998
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITTKTGDKGLTGLFTGDRIAKYSPIMEANGTIDELSSFLGEAKHYVPKEMAEVLEKIQ CCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH VELYSLMAEIASKGKYKKVGEGEVKWLEELIHKYEEEVQLRAFVLPGSTIASAKLDVCRT HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH VARRAERAVARLVLDYGFGSSALIYLNRLSDLLFIMARAIEKREGKIKEVK HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PITTKTGDKGLTGLFTGDRIAKYSPIMEANGTIDELSSFLGEAKHYVPKEMAEVLEKIQ CCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH VELYSLMAEIASKGKYKKVGEGEVKWLEELIHKYEEEVQLRAFVLPGSTIASAKLDVCRT HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH VARRAERAVARLVLDYGFGSSALIYLNRLSDLLFIMARAIEKREGKIKEVK HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA