| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223660
Identifier: 212223660
GI number: 212223660
Start: 470109
End: 471359
Strand: Reverse
Name: 212223660
Synonym: TON_0512
Alternate gene names: NA
Gene position: 471359-470109 (Counterclockwise)
Preceding gene: 212223661
Following gene: 212223658
Centisome position: 25.51
GC content: 49.96
Gene sequence:
>1251_bases ATGTCGAGGGGCATCTACGAGTGCATCAACTGTGGACATAGGGAGATCCTAGATTCATCCGAGCCACTGCTCGAGAAAGC CTGTCCTCGCTGTGGAAGGGACATGGTTCTGGTAGGATTCTATACGGAGTCCCAAGAGCTCACAGTGCAGGTCCAGCCAA GCAGGCCTTCCCTCCCGGAGAACCTCAAAGAAAAGCTGAAGGAGTTCTATAATCTTGAACTAAAACAGATAGATGGCAAC GTCTTCGTCTTTGAAGTTCAAGGGATAATGGAAAATAACTTTGAGAGAGTCCTAAGAGAGCTTGAAGAACTCGGCTATTG GGCCGCTCTCAAGAAGCGTGAGGGTAAAGTGCTGCTCTTTGTCTTCCCTGCCCAGGAAATAAAGGAGGACAACAGGTGGT TGCCGTGGATCTTCCTCATCGCGACGATTTTCACTACATTCCTGGCCGGTTACTACCTCTCGCTGGCCTACATAGATACC CTTAATTACTACGGTCTTCCTGGAATACGAAACCCTTATCTCAACGCGATTGCGTTCTCGATAAGTGTCATGGCAATACT GGGAACCCACGAGCTTGGCCACAAGATAGCCGCGGCGTATCATGGCGTTAGAGCTACAATGCCATACTTCATTCCCTTCC CTAGCATGCTGGGGACGCTTGGGGCAGTAATCAGGGTAAAATCACCACTGCCCACAAGGAATGCAGCAATAGACCTTGGT ATCAGCGGACCAATAGCTGGGTTTTTGATAGCCCTCCCGGTAAGCATAATCGGACTTAGACTTTCCATTCCAGTGCCAGC GGAACTTGTCTCGCCCACAGAAGGCAGTATAGTCTTTGGGGAGAATCTGATATTCCTGCTCTTGGAGAAATACATCGTGA CTTTCCCAGAGGATACAGTGATTTTCTTACATCCCGTTGCCATTGCTGGATGGGTGGGCATTCTAGTGACTTTCTTAAAC CTCATTCCTGCTGCTCAGCTTGATGGCGGCCACATAGCAAGGGCCTTCCTCAGTGAGAAGACGCACCGCTATCTCACGAT TGCTGTTGGTTTAGTTCTCATAGGCATGAGCTTTCTCTGGGTCGGCTGGCTCATTTGGGGCATGCTTGTGCTCCTGATGG GTTCGGTCGGAAATCCTGGAGCACTCGATGAGGTCTCCTCAATCTCAAAGAAAAGGCTCGTCTTGGTTATTCTGGCAGTG ATGATCTTCCTAATTTCTGCAACACCGAGACCGCTCTGGGTCACCGGTTGA
Upstream 100 bases:
>100_bases AGTGGACAGAGGGTCAGGGTCAAAGCCGACGAGGGACTGGTCGAAGTTGAGGAATAGCATTTTTAAGGTCCGTTTCAATT CTTTTTAGGGAGTGCAAAAA
Downstream 100 bases:
>100_bases TCTTTCTTTCCTTTAAGATTTGTTCGATATCATAGTATATTGAGTCCCTCGAAACACCGAACATTCTAGCGATTTCGGAT ATGTTAAGAACCTTCGGATT
Product: membrane-associated metallopeptidase
Products: NA
Alternate protein names: Peptidase; Membrane-Associated Zn-Dependent Protease; M50 Family Peptidase; Metalloprotease; Zinc Metalloprotease; Zinc Protease; Membrane-Associated Metallopeptidase; M50 Family Metallopeptidase; M50B Family Peptidase; Peptidase Family; Membrane Associated Metalloprotease; S2P Family Metalloprotease; Integral Membrane Protease
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSRGIYECINCGHREILDSSEPLLEKACPRCGRDMVLVGFYTESQELTVQVQPSRPSLPENLKEKLKEFYNLELKQIDGN VFVFEVQGIMENNFERVLRELEELGYWAALKKREGKVLLFVFPAQEIKEDNRWLPWIFLIATIFTTFLAGYYLSLAYIDT LNYYGLPGIRNPYLNAIAFSISVMAILGTHELGHKIAAAYHGVRATMPYFIPFPSMLGTLGAVIRVKSPLPTRNAAIDLG ISGPIAGFLIALPVSIIGLRLSIPVPAELVSPTEGSIVFGENLIFLLLEKYIVTFPEDTVIFLHPVAIAGWVGILVTFLN LIPAAQLDGGHIARAFLSEKTHRYLTIAVGLVLIGMSFLWVGWLIWGMLVLLMGSVGNPGALDEVSSISKKRLVLVILAV MIFLISATPRPLWVTG
Sequences:
>Translated_416_residues MSRGIYECINCGHREILDSSEPLLEKACPRCGRDMVLVGFYTESQELTVQVQPSRPSLPENLKEKLKEFYNLELKQIDGN VFVFEVQGIMENNFERVLRELEELGYWAALKKREGKVLLFVFPAQEIKEDNRWLPWIFLIATIFTTFLAGYYLSLAYIDT LNYYGLPGIRNPYLNAIAFSISVMAILGTHELGHKIAAAYHGVRATMPYFIPFPSMLGTLGAVIRVKSPLPTRNAAIDLG ISGPIAGFLIALPVSIIGLRLSIPVPAELVSPTEGSIVFGENLIFLLLEKYIVTFPEDTVIFLHPVAIAGWVGILVTFLN LIPAAQLDGGHIARAFLSEKTHRYLTIAVGLVLIGMSFLWVGWLIWGMLVLLMGSVGNPGALDEVSSISKKRLVLVILAV MIFLISATPRPLWVTG >Mature_415_residues SRGIYECINCGHREILDSSEPLLEKACPRCGRDMVLVGFYTESQELTVQVQPSRPSLPENLKEKLKEFYNLELKQIDGNV FVFEVQGIMENNFERVLRELEELGYWAALKKREGKVLLFVFPAQEIKEDNRWLPWIFLIATIFTTFLAGYYLSLAYIDTL NYYGLPGIRNPYLNAIAFSISVMAILGTHELGHKIAAAYHGVRATMPYFIPFPSMLGTLGAVIRVKSPLPTRNAAIDLGI SGPIAGFLIALPVSIIGLRLSIPVPAELVSPTEGSIVFGENLIFLLLEKYIVTFPEDTVIFLHPVAIAGWVGILVTFLNL IPAAQLDGGHIARAFLSEKTHRYLTIAVGLVLIGMSFLWVGWLIWGMLVLLMGSVGNPGALDEVSSISKKRLVLVILAVM IFLISATPRPLWVTG
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46149; Mature: 46018
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGIYECINCGHREILDSSEPLLEKACPRCGRDMVLVGFYTESQELTVQVQPSRPSLPE CCCCHHHHHCCCHHHHCCCCCHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCH NLKEKLKEFYNLELKQIDGNVFVFEVQGIMENNFERVLRELEELGYWAALKKREGKVLLF HHHHHHHHHHCCEEEEECCCEEEEEECCHHHCCHHHHHHHHHHCCHHHHHHCCCCCEEEE VFPAQEIKEDNRWLPWIFLIATIFTTFLAGYYLSLAYIDTLNYYGLPGIRNPYLNAIAFS EECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ISVMAILGTHELGHKIAAAYHGVRATMPYFIPFPSMLGTLGAVIRVKSPLPTRNAAIDLG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHEEECCCCCCCCCEEEEC ISGPIAGFLIALPVSIIGLRLSIPVPAELVSPTEGSIVFGENLIFLLLEKYIVTFPEDTV CCCHHHHHHHHHHHHHHHEEEECCCCHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCE IFLHPVAIAGWVGILVTFLNLIPAAQLDGGHIARAFLSEKTHRYLTIAVGLVLIGMSFLW EEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGWLIWGMLVLLMGSVGNPGALDEVSSISKKRLVLVILAVMIFLISATPRPLWVTG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure SRGIYECINCGHREILDSSEPLLEKACPRCGRDMVLVGFYTESQELTVQVQPSRPSLPE CCCHHHHHCCCHHHHCCCCCHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCH NLKEKLKEFYNLELKQIDGNVFVFEVQGIMENNFERVLRELEELGYWAALKKREGKVLLF HHHHHHHHHHCCEEEEECCCEEEEEECCHHHCCHHHHHHHHHHCCHHHHHHCCCCCEEEE VFPAQEIKEDNRWLPWIFLIATIFTTFLAGYYLSLAYIDTLNYYGLPGIRNPYLNAIAFS EECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ISVMAILGTHELGHKIAAAYHGVRATMPYFIPFPSMLGTLGAVIRVKSPLPTRNAAIDLG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHEEECCCCCCCCCEEEEC ISGPIAGFLIALPVSIIGLRLSIPVPAELVSPTEGSIVFGENLIFLLLEKYIVTFPEDTV CCCHHHHHHHHHHHHHHHEEEECCCCHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCE IFLHPVAIAGWVGILVTFLNLIPAAQLDGGHIARAFLSEKTHRYLTIAVGLVLIGMSFLW EEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGWLIWGMLVLLMGSVGNPGALDEVSSISKKRLVLVILAVMIFLISATPRPLWVTG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA