Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223661

Identifier: 212223661

GI number: 212223661

Start: 471403

End: 471795

Strand: Reverse

Name: 212223661

Synonym: TON_0513

Alternate gene names: NA

Gene position: 471795-471403 (Counterclockwise)

Preceding gene: 212223662

Following gene: 212223660

Centisome position: 25.54

GC content: 52.42

Gene sequence:

>393_bases
ATGAAACTCAAGGGCAGAAAGATCGTCGGTGGCAAGGCTGAGGGAGAACTGATAGTCTCGCAGAAGCCCCTTTCATTCCT
CGGCGGCGTTGACCCCAATACAGGAATAGTTACCGACGCCGAGAGCGATATAAGGGGCCAGAGCATAGCTGGAAAAGTCC
TGGCATTTCCACGTGGTAAGGGATCAACCGTTGGCTCTTACGTTATCTACGCCCTTAAGAAGAACGGAAAGGCGCCGAAG
GCAATAATCGTCGGTGAGGCCGAGACAATAGTGGCAACAGGAGCTATAATAGCGGGTATTCCTATGGTTGATGGCATAGA
CGTCTCCAAGCTCAAGAGTGGACAGAGGGTCAGGGTCAAAGCCGACGAGGGACTGGTCGAAGTTGAGGAATAG

Upstream 100 bases:

>100_bases
CAACAGCGGAAAATCAGCCTTCTACTTCCGGTCCTTTGGCTTCAAGGTTAGGCTCGACGATGCAGAAAACCTCATAAAAG
AGGCACCGTGAGGTGAGAAA

Downstream 100 bases:

>100_bases
CATTTTTAAGGTCCGTTTCAATTCTTTTTAGGGAGTGCAAAAAATGTCGAGGGGCATCTACGAGTGCATCAACTGTGGAC
ATAGGGAGATCCTAGATTCA

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGKGSTVGSYVIYALKKNGKAPK
AIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVKADEGLVEVEE

Sequences:

>Translated_130_residues
MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGKGSTVGSYVIYALKKNGKAPK
AIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVKADEGLVEVEE
>Mature_130_residues
MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGKGSTVGSYVIYALKKNGKAPK
AIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVKADEGLVEVEE

Specific function: Unknown

COG id: COG1786

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0107 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015928
- InterPro:   IPR002840
- InterPro:   IPR008279
- InterPro:   IPR012016
- InterPro:   IPR020794 [H]

Pfam domain/function: PF01989 DUF126 [H]

EC number: NA

Molecular weight: Translated: 13430; Mature: 13430

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGK
CCCCCCEEECCCCCCEEEEECCCHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCC
GSTVGSYVIYALKKNGKAPKAIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVK
CCCCCEEEEEEEECCCCCCEEEEEECCCEEEECCCEEECCCCCCCCCHHHCCCCCEEEEE
ADEGLVEVEE
CCCCEEEECC
>Mature Secondary Structure
MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGK
CCCCCCEEECCCCCCEEEEECCCHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCC
GSTVGSYVIYALKKNGKAPKAIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVK
CCCCCEEEEEEEECCCCCCEEEEEECCCEEEECCCEEECCCCCCCCCHHHCCCCCEEEEE
ADEGLVEVEE
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA