Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is rpl37ae [H]

Identifier: 212223601

GI number: 212223601

Start: 423866

End: 424126

Strand: Reverse

Name: rpl37ae [H]

Synonym: TON_0455

Alternate gene names: 212223601

Gene position: 424126-423866 (Counterclockwise)

Preceding gene: 212223609

Following gene: 212223600

Centisome position: 22.96

GC content: 60.54

Gene sequence:

>261_bases
ATGGGAAGGACTACTAAGGTCGGTTCAGCCGGAAGGTTCGGTCCGAGGTACGGTCTCAAGATCAGAAGAAGGGTCGCGGC
CGTTGAGGCCAAGATGAAGCAGAAGCACATCTGCCCGGTCTGCGGAAGGAAGGCGGTCAGAAGGATAAGTACCGGCATAT
GGCAGTGCCAGAAGTGCGGTGCCACCTTTGCCGGCGGCGCCTACCTGCCGGTTACCCCGGCTGGAAAGGTCGCCAAGCGT
GTTACGGCCTCCAAGGCCTGA

Upstream 100 bases:

>100_bases
CATAAGCCCGCTCGGTGTCCAGGTATATGCAAAGGTTTATAAAACGTCCCCGGAAAAACCCTTCAGTCGTGAAAATTGCT
GATAATTAGGGGTGATGCTC

Downstream 100 bases:

>100_bases
CCCCTTTCCTTTGCTTAGTTTAGGGTGATAACTATGGTGATGGCCGTTTACCGCTGTGCGAAATGCGGAAAGGAGGTCGA
GCTCGACCTCGAGAACACCA

Product: 50S ribosomal protein L37Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MGRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPVTPAGKVAKR
VTASKA

Sequences:

>Translated_86_residues
MGRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPVTPAGKVAKR
VTASKA
>Mature_85_residues
GRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPVTPAGKVAKRV
TASKA

Specific function: Unknown

COG id: COG1997

COG function: function code J; Ribosomal protein L37AE/L43A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L37Ae family [H]

Homologues:

Organism=Homo sapiens, GI4506643, Length=72, Percent_Identity=40.2777777777778, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17535699, Length=67, Percent_Identity=43.2835820895522, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325300, Length=72, Percent_Identity=45.8333333333333, Blast_Score=67, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322554, Length=72, Percent_Identity=45.8333333333333, Blast_Score=67, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581863, Length=72, Percent_Identity=41.6666666666667, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17864394, Length=72, Percent_Identity=41.6666666666667, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002674
- InterPro:   IPR011331
- InterPro:   IPR022945
- InterPro:   IPR011332 [H]

Pfam domain/function: PF01780 Ribosomal_L37ae [H]

EC number: NA

Molecular weight: Translated: 9203; Mature: 9072

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
ATFAGGAYLPVTPAGKVAKRVTASKA
CCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
GRTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
ATFAGGAYLPVTPAGKVAKRVTASKA
CCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA