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The map label for this gene is rpoP

Identifier: 212223600

GI number: 212223600

Start: 423683

End: 423832

Strand: Reverse

Name: rpoP

Synonym: TON_0454

Alternate gene names: 212223600

Gene position: 423832-423683 (Counterclockwise)

Preceding gene: 212223601

Following gene: 212223599

Centisome position: 22.94

GC content: 59.33

Gene sequence:

>150_bases
ATGGTGATGGCCGTTTACCGCTGTGCGAAATGCGGAAAGGAGGTCGAGCTCGACCTCGAGAACACCAGAGAGGTTCGCTG
CCCCTACTGCGGCAGCAAGATACTCTACAAGCCCAGGCCCAGGGTGGCCAGGCGCGTAAAGGCAATCTGA

Upstream 100 bases:

>100_bases
CGGCGCCTACCTGCCGGTTACCCCGGCTGGAAAGGTCGCCAAGCGTGTTACGGCCTCCAAGGCCTGACCCCTTTCCTTTG
CTTAGTTTAGGGTGATAACT

Downstream 100 bases:

>100_bases
TTCTTTCCAATTTCGAAAGGCTTTTATCCAATCAACTGAGTTTTGAGTGAGGGCCATGATGCTGATAACGACTTCACACA
GACCCACCAGGAGGACGAGG

Product: DNA-directed RNA polymerase subunit P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MVMAVYRCAKCGKEVELDLENTREVRCPYCGSKILYKPRPRVARRVKAI

Sequences:

>Translated_49_residues
MVMAVYRCAKCGKEVELDLENTREVRCPYCGSKILYKPRPRVARRVKAI
>Mature_49_residues
MVMAVYRCAKCGKEVELDLENTREVRCPYCGSKILYKPRPRVARRVKAI

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

COG id: COG1996

COG function: function code K; DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal rpoP/eukaryotic RPC10 RNA polymerase subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RPOP_THEON (B6YTZ7)

Other databases:

- EMBL:   CP000855
- RefSeq:   YP_002306836.1
- GeneID:   7016749
- GenomeReviews:   CP000855_GR
- KEGG:   ton:TON_0454
- HOGENOM:   HBG726987
- ProtClustDB:   PRK00398
- HAMAP:   MF_00615
- InterPro:   IPR006591
- SMART:   SM00659

Pfam domain/function: PF03604 DNA_RNApol_7kD

EC number: =2.7.7.6

Molecular weight: Translated: 5701; Mature: 5701

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMAVYRCAKCGKEVELDLENTREVRCPYCGSKILYKPRPRVARRVKAI
CEEHHHHHHHCCCEEEECCCCCCEEECCCCCCCCEECCCHHHHHHHCCC
>Mature Secondary Structure
MVMAVYRCAKCGKEVELDLENTREVRCPYCGSKILYKPRPRVARRVKAI
CEEHHHHHHHCCCEEEECCCCCCEEECCCCCCCCEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA