| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223567
Identifier: 212223567
GI number: 212223567
Start: 392765
End: 394030
Strand: Reverse
Name: 212223567
Synonym: TON_0421
Alternate gene names: NA
Gene position: 394030-392765 (Counterclockwise)
Preceding gene: 212223571
Following gene: 212223565
Centisome position: 21.33
GC content: 52.53
Gene sequence:
>1266_bases ATGCTCATGCTCGTCGATGGAGACCTTCACATTCACTCGAGGTACTCGAAAGCGGTCTCGAAGTTAATGACCATTCCGAT GCTGGCAGAGAATGCACGCTTCAAAGGACTCGGTCTTGTGGGCACGGGAGACATCTTGAACCCCAAGTGGGAGGAGGAGC TTCTGAAGTACACCGAAAAGATTGACGAGGGAACCTACGAGAGAAAGGGAATCCGCTTTCTGCTAACGACAGAGATCGAG GACAATAAGAGAGTCCATCACGTTCTCATCTTTCCGAGTATCGATGCCGTTTGCGAGATGCGGGAGGCGCTGAGACCATA TTCAAACGACATCGACACCGAGGGAAGGCCACACCTCAACCTTTCGGCTGCTGAAATAGCTGACATTGCGAACGAGCTCG ATGTTCTAATCGGCCCAGCCCATGCTTTTACCCCATGGACAGCACTGTACAAGGAGTACAACAGCCTGAAGGATGCCTAT CAGGGGGCCAAAATTCACTTCCTCGAGCTCGGCCTTTCCGCCGATTCTGAGATGGCAGATAGAATAAAAGCCCATCACGG ACTCACCTACCTCAGCAATTCAGATGCCCACTCCCCGATGCCACACCGACTCGGGAGAGAGTTCAACCGCTTCAATATCA AAGAGGCAACCTTTGAGGAGGTCAGGAAAGCCATCTTGAAGCGCGGAGGGAGAAGAATAGTCCTCAATGCCGGGCTTGAC CCGAGGCTCGGAAAGTACCATCTAACCGCCTGTTCTCGCTGCTACGCCAAGTATTCACCAGAGGAAGCCAAAGCCTTCAA ATGGAAGTGCCCCAAGTGTGGCGGGAGGATAAAGAAGGGTGTCCACGACAGAATTCTCGAGCTGGCGGATACAGAAGAAA GGCCCAAAGACAGGCCGCCCTACCTGAGACTTGCCCCTCTGGCTGAGATAATAGCGATGGTAATCGGCAAAGGTGTTGAG ACGAAGGCCGTGAAGGCCATCTGGGAGCGCTTTTTGAAGGAGTTCGGAAGCGAGATTGAAGTCCTCGTTGACGTGCCTAT CGAGAGTCTCGCGGAGGTTCACGAGGAGGTGGCAAAAGCGGTCTGGGCCTACAGGAAGGGCAAGCTGATAGTGATTCCAG GCGGAGGCGGAAAGTACGGAGAGATAAAACTGCCCGAGGAAATAAGAAAGGCTAGAATAGACGAGCTGGAGAGCGTTGAG GTGAAAGTGCCGAAGGAAGAATACAAGCCGAAGCAGACTTCGCTGATGAAATTTTTGAAAAACTGA
Upstream 100 bases:
>100_bases TTTCTCAGAGAGGCAACGAATCCTTCGACTTTCATAGTTTCCACCGATTGAACCTATGGAGAAGCCGTTATAAAGCTTTA ACCCCCTCAACCTTTGGTTG
Downstream 100 bases:
>100_bases CCTCCTCCCCGCCCTAAAGGGCGAGGCTCTCAAGAGAAAAAGTAATAGGAAATCAAAGCATGAAGAGGGGCTTTATCAGA ACCGCAACTACTGGAACGGC
Product: phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MLMLVDGDLHIHSRYSKAVSKLMTIPMLAENARFKGLGLVGTGDILNPKWEEELLKYTEKIDEGTYERKGIRFLLTTEIE DNKRVHHVLIFPSIDAVCEMREALRPYSNDIDTEGRPHLNLSAAEIADIANELDVLIGPAHAFTPWTALYKEYNSLKDAY QGAKIHFLELGLSADSEMADRIKAHHGLTYLSNSDAHSPMPHRLGREFNRFNIKEATFEEVRKAILKRGGRRIVLNAGLD PRLGKYHLTACSRCYAKYSPEEAKAFKWKCPKCGGRIKKGVHDRILELADTEERPKDRPPYLRLAPLAEIIAMVIGKGVE TKAVKAIWERFLKEFGSEIEVLVDVPIESLAEVHEEVAKAVWAYRKGKLIVIPGGGGKYGEIKLPEEIRKARIDELESVE VKVPKEEYKPKQTSLMKFLKN
Sequences:
>Translated_421_residues MLMLVDGDLHIHSRYSKAVSKLMTIPMLAENARFKGLGLVGTGDILNPKWEEELLKYTEKIDEGTYERKGIRFLLTTEIE DNKRVHHVLIFPSIDAVCEMREALRPYSNDIDTEGRPHLNLSAAEIADIANELDVLIGPAHAFTPWTALYKEYNSLKDAY QGAKIHFLELGLSADSEMADRIKAHHGLTYLSNSDAHSPMPHRLGREFNRFNIKEATFEEVRKAILKRGGRRIVLNAGLD PRLGKYHLTACSRCYAKYSPEEAKAFKWKCPKCGGRIKKGVHDRILELADTEERPKDRPPYLRLAPLAEIIAMVIGKGVE TKAVKAIWERFLKEFGSEIEVLVDVPIESLAEVHEEVAKAVWAYRKGKLIVIPGGGGKYGEIKLPEEIRKARIDELESVE VKVPKEEYKPKQTSLMKFLKN >Mature_421_residues MLMLVDGDLHIHSRYSKAVSKLMTIPMLAENARFKGLGLVGTGDILNPKWEEELLKYTEKIDEGTYERKGIRFLLTTEIE DNKRVHHVLIFPSIDAVCEMREALRPYSNDIDTEGRPHLNLSAAEIADIANELDVLIGPAHAFTPWTALYKEYNSLKDAY QGAKIHFLELGLSADSEMADRIKAHHGLTYLSNSDAHSPMPHRLGREFNRFNIKEATFEEVRKAILKRGGRRIVLNAGLD PRLGKYHLTACSRCYAKYSPEEAKAFKWKCPKCGGRIKKGVHDRILELADTEERPKDRPPYLRLAPLAEIIAMVIGKGVE TKAVKAIWERFLKEFGSEIEVLVDVPIESLAEVHEEVAKAVWAYRKGKLIVIPGGGGKYGEIKLPEEIRKARIDELESVE VKVPKEEYKPKQTSLMKFLKN
Specific function: Unknown
COG id: COG1379
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DOD-type homing endonuclease domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005287 - InterPro: IPR003586 - InterPro: IPR003587 - InterPro: IPR006142 - InterPro: IPR004042 - InterPro: IPR006141 - InterPro: IPR003141 - InterPro: IPR016195 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47723; Mature: 47723
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMLVDGDLHIHSRYSKAVSKLMTIPMLAENARFKGLGLVGTGDILNPKWEEELLKYTEK CEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH IDEGTYERKGIRFLLTTEIEDNKRVHHVLIFPSIDAVCEMREALRPYSNDIDTEGRPHLN HCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCC LSAAEIADIANELDVLIGPAHAFTPWTALYKEYNSLKDAYQGAKIHFLELGLSADSEMAD CHHHHHHHHHHHHHHEECCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH RIKAHHGLTYLSNSDAHSPMPHRLGREFNRFNIKEATFEEVRKAILKRGGRRIVLNAGLD HHHHHCCEEEECCCCCCCCCCHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCC PRLGKYHLTACSRCYAKYSPEEAKAFKWKCPKCGGRIKKGVHDRILELADTEERPKDRPP CCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC YLRLAPLAEIIAMVIGKGVETKAVKAIWERFLKEFGSEIEVLVDVPIESLAEVHEEVAKA CEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH VWAYRKGKLIVIPGGGGKYGEIKLPEEIRKARIDELESVEVKVPKEEYKPKQTSLMKFLK HHHHCCCCEEEEECCCCCCCCEECHHHHHHHHHCCCCCCEEECCHHHCCCHHHHHHHHHC N C >Mature Secondary Structure MLMLVDGDLHIHSRYSKAVSKLMTIPMLAENARFKGLGLVGTGDILNPKWEEELLKYTEK CEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH IDEGTYERKGIRFLLTTEIEDNKRVHHVLIFPSIDAVCEMREALRPYSNDIDTEGRPHLN HCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCC LSAAEIADIANELDVLIGPAHAFTPWTALYKEYNSLKDAYQGAKIHFLELGLSADSEMAD CHHHHHHHHHHHHHHEECCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH RIKAHHGLTYLSNSDAHSPMPHRLGREFNRFNIKEATFEEVRKAILKRGGRRIVLNAGLD HHHHHCCEEEECCCCCCCCCCHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCC PRLGKYHLTACSRCYAKYSPEEAKAFKWKCPKCGGRIKKGVHDRILELADTEERPKDRPP CCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC YLRLAPLAEIIAMVIGKGVETKAVKAIWERFLKEFGSEIEVLVDVPIESLAEVHEEVAKA CEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH VWAYRKGKLIVIPGGGGKYGEIKLPEEIRKARIDELESVEVKVPKEEYKPKQTSLMKFLK HHHHCCCCEEEEECCCCCCCCEECHHHHHHHHHCCCCCCEEECCHHHCCCHHHHHHHHHC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]