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The map label for this gene is sla [H]

Identifier: 212223559

GI number: 212223559

Start: 384182

End: 386038

Strand: Reverse

Name: sla [H]

Synonym: TON_0413

Alternate gene names: 212223559

Gene position: 386038-384182 (Counterclockwise)

Preceding gene: 212223560

Following gene: 212223558

Centisome position: 20.89

GC content: 56.27

Gene sequence:

>1857_bases
ATGAAAGTGAAGAAGATCGCGGCCCTTGCAGTTGGTGCCGCAATGGTTGGAGCCACCGTCGGCTTTGCCAGTGCCCAGCC
GACCGTTCCGGAGATTCCGAAGGACTTCTTCGTTAACGCCGATGGAACCCCGAACGTTAAAATCGTTGTCGGAAGTAACG
CTGCTGCCATGGACGTTGCCAGCGCCGCTGACATAGCCGTTGCCCTTGGAAGCCTACTCTACACCACCGAGCAGGTCGAG
GCCCAGAACGCTTACGTGAAGATCAAGGCCGAGTACCCACCTGCCACCCTCGATGAGTGGACCATCTACGCTTACAACTT
TACCACGATAACTGAGGACCACGGCATAACGAACATTACCAGCTGGGCCACCAGCTATGACGAGCTTCCAGGTGACTACT
GGTGGAATGGTGCTGCCTACGCTGGCACCTACACTGACTGGGTAAGCAACTTCATGGTTACCACCGACATTGACGACAAG
GATATGATAGATGGCGTGGACGAACTAATTGACTGGCACATTACTATACAGAACGTTCAGCTCAGCTCCAAGGACCCCGC
CGAGTGGGACGGCACCATGCCGCCCAAGGACGCCGACCTCGTAATCACCCCGGGCAACGTCACTGTCCTCGTTGACTATG
TACTCTACAACTATACAACATCCACCACTGTCGAAGTCAGCCCGGCTTACCCAGAGTGGGGCATTGATGCCACCTACGAC
ACTGTTGAGAGCTGGTATCTCGACGATGCTGAGGACGGAGGAACCCTTGCCGACCCCAATCCAGTTGTCAAGGGTGTCAC
AGTCGGAGACACCTTCTCTGTCTTCGGACAGACCTACTATGTCTTGGATGTTAACAACGGCACTTTCACTGCAGGTCTCG
ACAAGGGCAAGGCCTGGTATCAGGTCGGCCAGCCGCAGGCCATCGAGGGCACTGACTGGATCGTCACCGTCCTCGACATA
AGCATCATCGACCAGAGGGCCCTCGTCGTCGTCAAGAACGCCGTCACCGGCGAGGAGAGCGGCCAGATTATCCTCGAGGT
CCCATCTGAACTGTGGGACGGAGAAACCTGGGACGAGAACTACGCTGTGGACGTCTTTGGTGACGGCAGGGTAAAGCTCC
TCCTCACGGACACCTTTGTCGGTATCGACGGCCACCTCATAGCCAGCATTTGGGCCCAAGTTGACGTCGTTGACTACACC
AACGATGCCACTGTAGTCTACGACGGCAAGGAATGGTCAATGACTATCAACACTTACTACGACAACAACGATGAGGCTTG
GTACATAACCAACATAACCCTCACTAACCGCGACACCCTCGAGGGCAACCCGGTTGACATCTTCGGCACCTACGACCTTA
AGTACTGGTTCGAGATCAAGGAGCATGACGCCTACTACAACCCGGCCAACGACAGCATCGTTCAGGCCCCAGAGGGAACC
ACCTACAAGGTAGCCTACGCCTATATAGCCCTCACCGAGAAGGAGGGTACTGTCAGCGAGATCGAGCTCAGCGTTGGCGA
CAATGTCCTTGACACCGAGTACTACGTTGCTGGCATCTACGCTGACCAGGTAATGGTCAAGCCGGTCGCCAGCCCGATAA
CCGTCATGGACTATGAGGTCAACCTTGAGGACCCAGGAAGCAACCTCATCCTCGTTGGTGGTCCAGTCGCCAACAGCGTC
ACCCAGTACCTCGTCGAGCAGGGCATCAGCCAGGTTGACTGGTACAACAGCCCAGGCGACATCGAGTACATCCAGGATGC
CCTTGGTGGCTACGACGTTGTCATCGTCGCTGGTGCCACCAGGGACGAGACCAAGGCTGCTGCCGAGGCCCTTATGGAGT
ACCTCGCTGGCCTCTGA

Upstream 100 bases:

>100_bases
AAAGCGAAAAGTATATATACCCTTATCCGGTAGAGAGTGATTGACAACACATGTTAGACCATCCTAGGGCGTAAGCCCAA
ACTTAAGGAGGTGTTGGGAA

Downstream 100 bases:

>100_bases
AGGCCTTTCCTTCTCTTTTAATTCTCTCTTCTGGGGGTTTTAGCCTTGAATCAAAAGAGGCTCGCAGTCGTTCTTGTAGT
TCTCCTCATAGTCATTGCTC

Product: S-layer protein precursor

Products: NA

Alternate protein names: Cell surface glycoprotein; Surface layer protein [H]

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MKVKKIAALAVGAAMVGATVGFASAQPTVPEIPKDFFVNADGTPNVKIVVGSNAAAMDVASAADIAVALGSLLYTTEQVE
AQNAYVKIKAEYPPATLDEWTIYAYNFTTITEDHGITNITSWATSYDELPGDYWWNGAAYAGTYTDWVSNFMVTTDIDDK
DMIDGVDELIDWHITIQNVQLSSKDPAEWDGTMPPKDADLVITPGNVTVLVDYVLYNYTTSTTVEVSPAYPEWGIDATYD
TVESWYLDDAEDGGTLADPNPVVKGVTVGDTFSVFGQTYYVLDVNNGTFTAGLDKGKAWYQVGQPQAIEGTDWIVTVLDI
SIIDQRALVVVKNAVTGEESGQIILEVPSELWDGETWDENYAVDVFGDGRVKLLLTDTFVGIDGHLIASIWAQVDVVDYT
NDATVVYDGKEWSMTINTYYDNNDEAWYITNITLTNRDTLEGNPVDIFGTYDLKYWFEIKEHDAYYNPANDSIVQAPEGT
TYKVAYAYIALTEKEGTVSEIELSVGDNVLDTEYYVAGIYADQVMVKPVASPITVMDYEVNLEDPGSNLILVGGPVANSV
TQYLVEQGISQVDWYNSPGDIEYIQDALGGYDVVIVAGATRDETKAAAEALMEYLAGL

Sequences:

>Translated_618_residues
MKVKKIAALAVGAAMVGATVGFASAQPTVPEIPKDFFVNADGTPNVKIVVGSNAAAMDVASAADIAVALGSLLYTTEQVE
AQNAYVKIKAEYPPATLDEWTIYAYNFTTITEDHGITNITSWATSYDELPGDYWWNGAAYAGTYTDWVSNFMVTTDIDDK
DMIDGVDELIDWHITIQNVQLSSKDPAEWDGTMPPKDADLVITPGNVTVLVDYVLYNYTTSTTVEVSPAYPEWGIDATYD
TVESWYLDDAEDGGTLADPNPVVKGVTVGDTFSVFGQTYYVLDVNNGTFTAGLDKGKAWYQVGQPQAIEGTDWIVTVLDI
SIIDQRALVVVKNAVTGEESGQIILEVPSELWDGETWDENYAVDVFGDGRVKLLLTDTFVGIDGHLIASIWAQVDVVDYT
NDATVVYDGKEWSMTINTYYDNNDEAWYITNITLTNRDTLEGNPVDIFGTYDLKYWFEIKEHDAYYNPANDSIVQAPEGT
TYKVAYAYIALTEKEGTVSEIELSVGDNVLDTEYYVAGIYADQVMVKPVASPITVMDYEVNLEDPGSNLILVGGPVANSV
TQYLVEQGISQVDWYNSPGDIEYIQDALGGYDVVIVAGATRDETKAAAEALMEYLAGL
>Mature_618_residues
MKVKKIAALAVGAAMVGATVGFASAQPTVPEIPKDFFVNADGTPNVKIVVGSNAAAMDVASAADIAVALGSLLYTTEQVE
AQNAYVKIKAEYPPATLDEWTIYAYNFTTITEDHGITNITSWATSYDELPGDYWWNGAAYAGTYTDWVSNFMVTTDIDDK
DMIDGVDELIDWHITIQNVQLSSKDPAEWDGTMPPKDADLVITPGNVTVLVDYVLYNYTTSTTVEVSPAYPEWGIDATYD
TVESWYLDDAEDGGTLADPNPVVKGVTVGDTFSVFGQTYYVLDVNNGTFTAGLDKGKAWYQVGQPQAIEGTDWIVTVLDI
SIIDQRALVVVKNAVTGEESGQIILEVPSELWDGETWDENYAVDVFGDGRVKLLLTDTFVGIDGHLIASIWAQVDVVDYT
NDATVVYDGKEWSMTINTYYDNNDEAWYITNITLTNRDTLEGNPVDIFGTYDLKYWFEIKEHDAYYNPANDSIVQAPEGT
TYKVAYAYIALTEKEGTVSEIELSVGDNVLDTEYYVAGIYADQVMVKPVASPITVMDYEVNLEDPGSNLILVGGPVANSV
TQYLVEQGISQVDWYNSPGDIEYIQDALGGYDVVIVAGATRDETKAAAEALMEYLAGL

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mj S-layer protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022651
- InterPro:   IPR006454
- InterPro:   IPR022650 [H]

Pfam domain/function: PF05124 S_layer_C; PF05123 S_layer_N [H]

EC number: NA

Molecular weight: Translated: 67577; Mature: 67577

Theoretical pI: Translated: 3.63; Mature: 3.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKKIAALAVGAAMVGATVGFASAQPTVPEIPKDFFVNADGTPNVKIVVGSNAAAMDVA
CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHEEECCCCCCEEEEECCCCCEEEHH
SAADIAVALGSLLYTTEQVEAQNAYVKIKAEYPPATLDEWTIYAYNFTTITEDHGITNIT
HHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCEEH
SWATSYDELPGDYWWNGAAYAGTYTDWVSNFMVTTDIDDKDMIDGVDELIDWHITIQNVQ
HHCCCHHCCCCCCEECCEEECCCHHHHHCCEEEEECCCCHHHHHHHHHHEEEEEEEEEEE
LSSKDPAEWDGTMPPKDADLVITPGNVTVLVDYVLYNYTTSTTVEVSPAYPEWGIDATYD
ECCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCHH
TVESWYLDDAEDGGTLADPNPVVKGVTVGDTFSVFGQTYYVLDVNNGTFTAGLDKGKAWY
HHHHEECCCCCCCCCCCCCCCCEEEEEECCCHHCCCCEEEEEECCCCEEEEECCCCCEEE
QVGQPQAIEGTDWIVTVLDISIIDQRALVVVKNAVTGEESGQIILEVPSELWDGETWDEN
ECCCCCEECCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCEEEEEECHHHCCCCCCCCC
YAVDVFGDGRVKLLLTDTFVGIDGHLIASIWAQVDVVDYTNDATVVYDGKEWSMTINTYY
EEEEEECCCEEEEEEEEEEECCCCHHHEEHHHEEEEEEECCCEEEEECCCEEEEEEEEEE
DNNDEAWYITNITLTNRDTLEGNPVDIFGTYDLKYWFEIKEHDAYYNPANDSIVQAPEGT
CCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEEECCCCEECCCCCCEEECCCCC
TYKVAYAYIALTEKEGTVSEIELSVGDNVLDTEYYVAGIYADQVMVKPVASPITVMDYEV
EEEEEEEEEEEECCCCCEEEEEEECCCCEECCCEEEEEEEECEEEEEECCCCEEEEEEEE
NLEDPGSNLILVGGPVANSVTQYLVEQGISQVDWYNSPGDIEYIQDALGGYDVVIVAGAT
EECCCCCCEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCEEEEEEECCC
RDETKAAAEALMEYLAGL
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVKKIAALAVGAAMVGATVGFASAQPTVPEIPKDFFVNADGTPNVKIVVGSNAAAMDVA
CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHEEECCCCCCEEEEECCCCCEEEHH
SAADIAVALGSLLYTTEQVEAQNAYVKIKAEYPPATLDEWTIYAYNFTTITEDHGITNIT
HHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCEEH
SWATSYDELPGDYWWNGAAYAGTYTDWVSNFMVTTDIDDKDMIDGVDELIDWHITIQNVQ
HHCCCHHCCCCCCEECCEEECCCHHHHHCCEEEEECCCCHHHHHHHHHHEEEEEEEEEEE
LSSKDPAEWDGTMPPKDADLVITPGNVTVLVDYVLYNYTTSTTVEVSPAYPEWGIDATYD
ECCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCHH
TVESWYLDDAEDGGTLADPNPVVKGVTVGDTFSVFGQTYYVLDVNNGTFTAGLDKGKAWY
HHHHEECCCCCCCCCCCCCCCCEEEEEECCCHHCCCCEEEEEECCCCEEEEECCCCCEEE
QVGQPQAIEGTDWIVTVLDISIIDQRALVVVKNAVTGEESGQIILEVPSELWDGETWDEN
ECCCCCEECCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCEEEEEECHHHCCCCCCCCC
YAVDVFGDGRVKLLLTDTFVGIDGHLIASIWAQVDVVDYTNDATVVYDGKEWSMTINTYY
EEEEEECCCEEEEEEEEEEECCCCHHHEEHHHEEEEEEECCCEEEEECCCEEEEEEEEEE
DNNDEAWYITNITLTNRDTLEGNPVDIFGTYDLKYWFEIKEHDAYYNPANDSIVQAPEGT
CCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEEECCCCEECCCCCCEEECCCCC
TYKVAYAYIALTEKEGTVSEIELSVGDNVLDTEYYVAGIYADQVMVKPVASPITVMDYEV
EEEEEEEEEEEECCCCCEEEEEEECCCCEECCCEEEEEEEECEEEEEECCCCEEEEEEEE
NLEDPGSNLILVGGPVANSVTQYLVEQGISQVDWYNSPGDIEYIQDALGGYDVVIVAGAT
EECCCCCCEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCEEEEEEECCC
RDETKAAAEALMEYLAGL
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 12382110 [H]