| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223560
Identifier: 212223560
GI number: 212223560
Start: 386238
End: 387062
Strand: Reverse
Name: 212223560
Synonym: TON_0414
Alternate gene names: NA
Gene position: 387062-386238 (Counterclockwise)
Preceding gene: 212223561
Following gene: 212223559
Centisome position: 20.95
GC content: 47.52
Gene sequence:
>825_bases TTGGCGGAGATTGAGGTTATTTTCTACATAGAAGCCCTTGGAAACGACAAGAAAGTTTTAGAAAGGGCTCTGGAGGAGAC TGCCAAGAGCCTCAAAAACGAGAAGGGTGTCAAAATCAAATACATAAACGTCGAAGACGTGCTGGAAAACGAAGATGAGG AGCTCCTTAAGTATTCTGGGGTTATAGAAGCTGGAATTTCCGGAGATCTAGAAAACGTAATCCGACTGGCCCTTAAATAT TCTCCAGCCATCGTTGAGGTTCTCAAACCCGGAAAGATTGAGATAGAGTCTAAGAGACTCATGAAAATTCTCGGAGAGGT CTCACTCTTCATGGGCAAGCTCATGAAAGAATTCGGAGGGCTAGCAGTCTATCCAAAGCTCGACGACCTTCCAGAGCCAA GAATCGGCTATTCAAGGGATGAAATTGAGGACTTTATAGTCGAAGACAGGAACATCCTCTACCGCTTCGTCATAGAAGTC TTCGGGGAGAACGAGGAGGGTATAAAAACCACGATGGCAAAGGCCCTGACGATTGAAGGGTGCAGGATAAACAAGCTCGC CGTTCAGGGGCAGGAGGAAGATGACCAGTTTAAGGGTCTTCTGGCGGCGGAGCTTCTTTCCCCCTTCGAAACTCTCGTCC AGCTGACTGCAAAGTACGCTCCAGTAGCAATTTCTATCCTGGAGCCCGAGATCATCGACGTCACAGCCAATGAGCTCCAG AACACACTAACAGACTTGGGTAGCTTCGTCAACGAACTCGTTACAAGGCCCATAAAAAGACGGATCATGGAGAAAAAGAA CACCGAGTTCAAGCTCAACCCATGA
Upstream 100 bases:
>100_bases AGTACCACGTGAAGGACGGGAAGTGTGAATACTGCGGTGAACCGATTCCGATAATTGGTACTTACATGAAAAAGCGATAT GATTGGATGTGGTGGTGAAA
Downstream 100 bases:
>100_bases TATTATCGGCAAAAGGCGAATACCTTATAGGCATTTAATTAAGCTCCCTTTCATTTTTACGGCAATTAGCGTGCTCTTTT TAAGCAGAGAAAGGGTCTGA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAEIEVIFYIEALGNDKKVLERALEETAKSLKNEKGVKIKYINVEDVLENEDEELLKYSGVIEAGISGDLENVIRLALKY SPAIVEVLKPGKIEIESKRLMKILGEVSLFMGKLMKEFGGLAVYPKLDDLPEPRIGYSRDEIEDFIVEDRNILYRFVIEV FGENEEGIKTTMAKALTIEGCRINKLAVQGQEEDDQFKGLLAAELLSPFETLVQLTAKYAPVAISILEPEIIDVTANELQ NTLTDLGSFVNELVTRPIKRRIMEKKNTEFKLNP
Sequences:
>Translated_274_residues MAEIEVIFYIEALGNDKKVLERALEETAKSLKNEKGVKIKYINVEDVLENEDEELLKYSGVIEAGISGDLENVIRLALKY SPAIVEVLKPGKIEIESKRLMKILGEVSLFMGKLMKEFGGLAVYPKLDDLPEPRIGYSRDEIEDFIVEDRNILYRFVIEV FGENEEGIKTTMAKALTIEGCRINKLAVQGQEEDDQFKGLLAAELLSPFETLVQLTAKYAPVAISILEPEIIDVTANELQ NTLTDLGSFVNELVTRPIKRRIMEKKNTEFKLNP >Mature_273_residues AEIEVIFYIEALGNDKKVLERALEETAKSLKNEKGVKIKYINVEDVLENEDEELLKYSGVIEAGISGDLENVIRLALKYS PAIVEVLKPGKIEIESKRLMKILGEVSLFMGKLMKEFGGLAVYPKLDDLPEPRIGYSRDEIEDFIVEDRNILYRFVIEVF GENEEGIKTTMAKALTIEGCRINKLAVQGQEEDDQFKGLLAAELLSPFETLVQLTAKYAPVAISILEPEIIDVTANELQN TLTDLGSFVNELVTRPIKRRIMEKKNTEFKLNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020292 - ProDom: PD039347 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30926; Mature: 30795
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIEVIFYIEALGNDKKVLERALEETAKSLKNEKGVKIKYINVEDVLENEDEELLKYSG CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCHHHHHHHHH VIEAGISGDLENVIRLALKYSPAIVEVLKPGKIEIESKRLMKILGEVSLFMGKLMKEFGG HHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC LAVYPKLDDLPEPRIGYSRDEIEDFIVEDRNILYRFVIEVFGENEEGIKTTMAKALTIEG EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECC CRINKLAVQGQEEDDQFKGLLAAELLSPFETLVQLTAKYAPVAISILEPEIIDVTANELQ CEEEHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHH NTLTDLGSFVNELVTRPIKRRIMEKKNTEFKLNP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure AEIEVIFYIEALGNDKKVLERALEETAKSLKNEKGVKIKYINVEDVLENEDEELLKYSG CEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCHHHHHHHHH VIEAGISGDLENVIRLALKYSPAIVEVLKPGKIEIESKRLMKILGEVSLFMGKLMKEFGG HHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC LAVYPKLDDLPEPRIGYSRDEIEDFIVEDRNILYRFVIEVFGENEEGIKTTMAKALTIEG EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECC CRINKLAVQGQEEDDQFKGLLAAELLSPFETLVQLTAKYAPVAISILEPEIIDVTANELQ CEEEHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHH NTLTDLGSFVNELVTRPIKRRIMEKKNTEFKLNP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]