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The map label for this gene is yhbZ [C]

Identifier: 212223502

GI number: 212223502

Start: 330443

End: 331519

Strand: Reverse

Name: yhbZ [C]

Synonym: TON_0356

Alternate gene names: 212223502

Gene position: 331519-330443 (Counterclockwise)

Preceding gene: 212223503

Following gene: 212223499

Centisome position: 17.94

GC content: 51.44

Gene sequence:

>1077_bases
ATGAAGAACCCATTCGAGAAGATGCCAACTGTCCTTACTGCTGACGAGCTCATCGATAAAGCCTTCCGAAGGGCTGAAAA
AGCCGCCTCAGCATTTACCCCCAAGGGCAACCGGGTAATGAAAGCTCGGCAGAGGGAGGAGCTCAGGGTTAGAACGGTCT
CCAATGTTGTGAGGGACAATCTCAGAAAGATACTCGACAGAACGCCGGGCGTTTCGACGCTTCCGAAGTTCTACCAGGAC
CTGGTTGATACGCTCGTTGACCGGGACCAGTTCCACCGCTCGCTGGCTCACGTCAACTGGGCGATAAAGACTATAAGGAA
CCTTGAGCAGAGATACGTTGAAAAGATACGCTACTCCAGAGAACCTGAAGAAATAGCCAAGCTTAGAAGGCAGTTCTACG
GAAGAGTTGCAGACGTTATTAAAGAGATAGGAGACGACCTTGAGTACCTCAACCAGGCAAGGAACGTTCTCAAAGATTTA
CCGGTCGTTGATCTGGAACTTCCAACCGTTGTCATAGCCGGCCACCCAAACGTTGGCAAGAGTACTCTGCTGAGGGCCCT
GACTAACGCGAAGCCTGAAGTTGCCAGCTACCCGTTCACCACAAAGGGCATAAATGTCGGCCAGTTCGAGGAACACTACC
TTAAGTACCAGGTCATTGATACCCCAGGACTGCTCGACAGGCCGCTGAGCGAGAGGAACGAAATCGAGAGGCAGGCAATT
CTCGCTTTGAAGCACCTTGGGAGAGTGATAGTCTATATATTCGACCCGTCAGAGTACTGCGGCTTCCCCATTGAGGAGCA
GATGCACCTCTTCGAGGAAATCTACGAGGAGTTCAAAGACTTCCCGTTTATAGTTGTCCTCAACAAGGTGGATATCGCCG
ACGAGGAGAAGATTAGGCAGGTCGAGGAGTTCGTTAAGAGTAAAGGCCTTAAGCCGCTGAGAATTTCAGCGCTGAACGGC
GAGGGGCTGAACGAGCTCAAGAGGCGCGTCATAGAGCTGGTACAGCCAATGGTCGAGGAGCAGGCGCGGAAAATAATGGA
GAATGAACTGAGGAAGTTCAGGGAAGAAGAATTCTAG

Upstream 100 bases:

>100_bases
TAGAGCACCTTCACGTGGGCAAAACGGTAGAGCTCTAGCGAACCTTTAAATACCCAGTCGAAAAGCTAACCACCGCGAGA
GAAAAGGGGAGGTGAGAGAG

Downstream 100 bases:

>100_bases
CTCTCTTCTCCCATCTTCTCAACCTTGACGCCGCAGTAGGGGCAGAACTCCAGATAGAGCGGTCTCATGGCCCCACAGTT
CTCGCACTTTTCCTTCAGCT

Product: predicted GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKNPFEKMPTVLTADELIDKAFRRAEKAASAFTPKGNRVMKARQREELRVRTVSNVVRDNLRKILDRTPGVSTLPKFYQD
LVDTLVDRDQFHRSLAHVNWAIKTIRNLEQRYVEKIRYSREPEEIAKLRRQFYGRVADVIKEIGDDLEYLNQARNVLKDL
PVVDLELPTVVIAGHPNVGKSTLLRALTNAKPEVASYPFTTKGINVGQFEEHYLKYQVIDTPGLLDRPLSERNEIERQAI
LALKHLGRVIVYIFDPSEYCGFPIEEQMHLFEEIYEEFKDFPFIVVLNKVDIADEEKIRQVEEFVKSKGLKPLRISALNG
EGLNELKRRVIELVQPMVEEQARKIMENELRKFREEEF

Sequences:

>Translated_358_residues
MKNPFEKMPTVLTADELIDKAFRRAEKAASAFTPKGNRVMKARQREELRVRTVSNVVRDNLRKILDRTPGVSTLPKFYQD
LVDTLVDRDQFHRSLAHVNWAIKTIRNLEQRYVEKIRYSREPEEIAKLRRQFYGRVADVIKEIGDDLEYLNQARNVLKDL
PVVDLELPTVVIAGHPNVGKSTLLRALTNAKPEVASYPFTTKGINVGQFEEHYLKYQVIDTPGLLDRPLSERNEIERQAI
LALKHLGRVIVYIFDPSEYCGFPIEEQMHLFEEIYEEFKDFPFIVVLNKVDIADEEKIRQVEEFVKSKGLKPLRISALNG
EGLNELKRRVIELVQPMVEEQARKIMENELRKFREEEF
>Mature_358_residues
MKNPFEKMPTVLTADELIDKAFRRAEKAASAFTPKGNRVMKARQREELRVRTVSNVVRDNLRKILDRTPGVSTLPKFYQD
LVDTLVDRDQFHRSLAHVNWAIKTIRNLEQRYVEKIRYSREPEEIAKLRRQFYGRVADVIKEIGDDLEYLNQARNVLKDL
PVVDLELPTVVIAGHPNVGKSTLLRALTNAKPEVASYPFTTKGINVGQFEEHYLKYQVIDTPGLLDRPLSERNEIERQAI
LALKHLGRVIVYIFDPSEYCGFPIEEQMHLFEEIYEEFKDFPFIVVLNKVDIADEEKIRQVEEFVKSKGLKPLRISALNG
EGLNELKRRVIELVQPMVEEQARKIMENELRKFREEEF

Specific function: Unknown

COG id: COG1084

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP1/OBG family. NOG subfamily [H]

Homologues:

Organism=Homo sapiens, GI55953087, Length=327, Percent_Identity=34.5565749235474, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI24308117, Length=171, Percent_Identity=34.5029239766082, Blast_Score=75, Evalue=7e-14,
Organism=Escherichia coli, GI1789574, Length=188, Percent_Identity=32.4468085106383, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25145600, Length=353, Percent_Identity=34.2776203966006, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI25145602, Length=353, Percent_Identity=34.2776203966006, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17508313, Length=138, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6325164, Length=337, Percent_Identity=33.2344213649852, Blast_Score=204, Evalue=1e-53,
Organism=Drosophila melanogaster, GI19921908, Length=345, Percent_Identity=34.2028985507246, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI20129375, Length=190, Percent_Identity=33.6842105263158, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006073
- InterPro:   IPR010674
- InterPro:   IPR005225 [H]

Pfam domain/function: PF06858 NOG1 [H]

EC number: NA

Molecular weight: Translated: 41778; Mature: 41778

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPFEKMPTVLTADELIDKAFRRAEKAASAFTPKGNRVMKARQREELRVRTVSNVVRDN
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRKILDRTPGVSTLPKFYQDLVDTLVDRDQFHRSLAHVNWAIKTIRNLEQRYVEKIRYSR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPEEIAKLRRQFYGRVADVIKEIGDDLEYLNQARNVLKDLPVVDLELPTVVIAGHPNVGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCH
STLLRALTNAKPEVASYPFTTKGINVGQFEEHYLKYQVIDTPGLLDRPLSERNEIERQAI
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHH
LALKHLGRVIVYIFDPSEYCGFPIEEQMHLFEEIYEEFKDFPFIVVLNKVDIADEEKIRQ
HHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
VEEFVKSKGLKPLRISALNGEGLNELKRRVIELVQPMVEEQARKIMENELRKFREEEF
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNPFEKMPTVLTADELIDKAFRRAEKAASAFTPKGNRVMKARQREELRVRTVSNVVRDN
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRKILDRTPGVSTLPKFYQDLVDTLVDRDQFHRSLAHVNWAIKTIRNLEQRYVEKIRYSR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPEEIAKLRRQFYGRVADVIKEIGDDLEYLNQARNVLKDLPVVDLELPTVVIAGHPNVGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCH
STLLRALTNAKPEVASYPFTTKGINVGQFEEHYLKYQVIDTPGLLDRPLSERNEIERQAI
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHH
LALKHLGRVIVYIFDPSEYCGFPIEEQMHLFEEIYEEFKDFPFIVVLNKVDIADEEKIRQ
HHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
VEEFVKSKGLKPLRISALNGEGLNELKRRVIELVQPMVEEQARKIMENELRKFREEEF
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]