| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223503
Identifier: 212223503
GI number: 212223503
Start: 331582
End: 332388
Strand: Reverse
Name: 212223503
Synonym: TON_0357
Alternate gene names: NA
Gene position: 332388-331582 (Counterclockwise)
Preceding gene: 212223507
Following gene: 212223502
Centisome position: 17.99
GC content: 52.79
Gene sequence:
>807_bases ATGAAACTGACGGTTCTCTACGAAAATAACTCGGGTTTTAAAAAGGGTCCCCTCGGGGCTCATGGCTTCTCTGCCCTGGT GGAACACCGGGGAGTTAGGGTTCTCGTTGATACTGGAACGGACGGGAGGATCCTTCTCAACAACATGGAGGAGTTCAGAG TAAAACCAAGAAAAATCAATTACATATTCATCACCCACGGTCACTACGACCACACGGGCGGGCTTAAAGTGTTCCTCGAA GCGAGGGGAAAACCTATCAAGGTGATAGCTCATCCGGAGATATTCCGGAGAAGAATAGCACTTAAGCCACACAGGCGCGA TATAGGGATTCCGTTCACGAGGGAAGAGCTTGAAGCTCTTGGAGCCGAGTTTATTTTAAGCGAGAAGCCCCTCGAGTTCG CGCCCGGCTTCATCAGCTCCGGCGAAATCGAGAGAAGAACCTGGGACAGGGCGGTAGGCTATCTCGAAGAGAAAGGGGAG CTCATCAAAGACCCCGTTAGGGACGACATGGCTCTCATAGTCGACCTGGGAGAGAGCGCTGCAGTTATCACCGGTTGCGG ACACTCAGGCGTTCTCAACATAGCCTGGCAAGCCGAAGACGTTTTGGGGAAGCCCGTTAAAGCCCTAATCGGAGGGCTGC ATCTCCTCGGTGCGAGCAAAGAGCTCCTTGATGACGTAGTTGAGAAAATTGACGCCGAAAAGCTCTACGCAGGCCACTGC ACGGGCATAGACTCCTACGCCTATCTGAAGGCGAGACTTGGGGATAGAATAGAGCACCTTCACGTGGGCAAAACGGTAGA GCTCTAG
Upstream 100 bases:
>100_bases TACCCGAAATCAAGGGGAGAGAGTAGTCATTCAAATATACCATGGTGACCACATGAAAGGTTTTAACTCTATGGGAACAT AAACTTTTCGAGGGAGTGAT
Downstream 100 bases:
>100_bases CGAACCTTTAAATACCCAGTCGAAAAGCTAACCACCGCGAGAGAAAAGGGGAGGTGAGAGAGATGAAGAACCCATTCGAG AAGATGCCAACTGTCCTTAC
Product: hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKLTVLYENNSGFKKGPLGAHGFSALVEHRGVRVLVDTGTDGRILLNNMEEFRVKPRKINYIFITHGHYDHTGGLKVFLE ARGKPIKVIAHPEIFRRRIALKPHRRDIGIPFTREELEALGAEFILSEKPLEFAPGFISSGEIERRTWDRAVGYLEEKGE LIKDPVRDDMALIVDLGESAAVITGCGHSGVLNIAWQAEDVLGKPVKALIGGLHLLGASKELLDDVVEKIDAEKLYAGHC TGIDSYAYLKARLGDRIEHLHVGKTVEL
Sequences:
>Translated_268_residues MKLTVLYENNSGFKKGPLGAHGFSALVEHRGVRVLVDTGTDGRILLNNMEEFRVKPRKINYIFITHGHYDHTGGLKVFLE ARGKPIKVIAHPEIFRRRIALKPHRRDIGIPFTREELEALGAEFILSEKPLEFAPGFISSGEIERRTWDRAVGYLEEKGE LIKDPVRDDMALIVDLGESAAVITGCGHSGVLNIAWQAEDVLGKPVKALIGGLHLLGASKELLDDVVEKIDAEKLYAGHC TGIDSYAYLKARLGDRIEHLHVGKTVEL >Mature_268_residues MKLTVLYENNSGFKKGPLGAHGFSALVEHRGVRVLVDTGTDGRILLNNMEEFRVKPRKINYIFITHGHYDHTGGLKVFLE ARGKPIKVIAHPEIFRRRIALKPHRRDIGIPFTREELEALGAEFILSEKPLEFAPGFISSGEIERRTWDRAVGYLEEKGE LIKDPVRDDMALIVDLGESAAVITGCGHSGVLNIAWQAEDVLGKPVKALIGGLHLLGASKELLDDVVEKIDAEKLYAGHC TGIDSYAYLKARLGDRIEHLHVGKTVEL
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 29745; Mature: 29745
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTVLYENNSGFKKGPLGAHGFSALVEHRGVRVLVDTGTDGRILLNNMEEFRVKPRKIN CEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCCHHHCCCCEEEE YIFITHGHYDHTGGLKVFLEARGKPIKVIAHPEIFRRRIALKPHRRDIGIPFTREELEAL EEEEECCCCCCCCCEEEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHC GAEFILSEKPLEFAPGFISSGEIERRTWDRAVGYLEEKGELIKDPVRDDMALIVDLGESA CHHHEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCE AVITGCGHSGVLNIAWQAEDVLGKPVKALIGGLHLLGASKELLDDVVEKIDAEKLYAGHC EEEEECCCCCEEEEEEECHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHEEECCC TGIDSYAYLKARLGDRIEHLHVGKTVEL CCCCHHHHHHHHHCCHHHEEECCCEECC >Mature Secondary Structure MKLTVLYENNSGFKKGPLGAHGFSALVEHRGVRVLVDTGTDGRILLNNMEEFRVKPRKIN CEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCCHHHCCCCEEEE YIFITHGHYDHTGGLKVFLEARGKPIKVIAHPEIFRRRIALKPHRRDIGIPFTREELEAL EEEEECCCCCCCCCEEEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHC GAEFILSEKPLEFAPGFISSGEIERRTWDRAVGYLEEKGELIKDPVRDDMALIVDLGESA CHHHEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCE AVITGCGHSGVLNIAWQAEDVLGKPVKALIGGLHLLGASKELLDDVVEKIDAEKLYAGHC EEEEECCCCCEEEEEEECHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHEEECCC TGIDSYAYLKARLGDRIEHLHVGKTVEL CCCCHHHHHHHHHCCHHHEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]