| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223499
Identifier: 212223499
GI number: 212223499
Start: 327987
End: 328877
Strand: Reverse
Name: 212223499
Synonym: TON_0353
Alternate gene names: NA
Gene position: 328877-327987 (Counterclockwise)
Preceding gene: 212223502
Following gene: 212223497
Centisome position: 17.8
GC content: 50.39
Gene sequence:
>891_bases ATGGGAGCGATAGATGCTTTTACAAAGACCTTCTCGATAGTTCTCGCCAACAAAAGGCTTTACCTACTCGTCCTGGCAAT GGCGCTCATCCTAGCCCTGCTGTCAATATACCTCATACCAAGTGACTTTGAGTACACATACAATCAGACCTCCATCCAAA AGGGCAATGTCATAGTTGAGGAATACGGGACGCCGATAACGGAAGATGAGATGGACATATTGATTGAGTTTTTCAAAGGC CTGATGATTTACCTCATCATAACCATCGTTCTAAGTTCAATCGTTGAGTACGGGATAACAAAGGGTATTTTCACGTACCT TAACGATGAGGACTACAGCCTCAGCGAACTGCTTGCGGATGGACTCAAACATTTTCCGGGAGTGCTGGTGATAAACATAA TCTATAGCCTCATAATGCTCGTTTTCATAAGCGTCGCGACCATTCCAATGGTTGTGGGGGCGCTGTTCCTCCCGGCTGGA GCCGTGCTCATACTGATTGGCGTGGTTCTTTTGTTCTTGGTTCTGGCCTTCACTTTGGGACTCTCATCTATGGCAATCCC CCTCTACGCGGACAAGGGCACCATAGGGGCCGCCTTCGAGGCATTCGGCTTAGGGTTCAGGAACGTCCTCTCAACCGTTG GATTCGGCGCCCTGCTGGGTGTCGCAGCCATAGGCATCGCCATCATAGCCAGCCCTCTGGCCTTCATAATCCAGCTCACG CTTCCGGAGAACCTGGCTCCCTACGTTTCAGCCTTCGTGCAGGCACCCTTAGACGCCCTGCTATACTTCTTCCTCTGGGC CGGCGGGGTTGCCTTCTACAGGGAGCTCCAGAGAATGGAAGAGCTGAAAAAAGTTGATGAAGAGCTGGTAGGGCTGGGAA TAGAAATTTAA
Upstream 100 bases:
>100_bases CTTAATCTTTAACCTATCGCCACTTTGGGCGGTTCGTTTATAAGCTTTTTCTGGAAGAATTTTTTAAAGCCTTGTCCCCA TTACTCCATCGGGTGGTGGT
Downstream 100 bases:
>100_bases TCCCCAAACTTCTTTTCTTTTGCTGCTTTTACGAGCCCCCTGAAGACAGGCGCCGGATTCATCGGCCTCGACTTGAACTC GGGATGGAACTGCGTTGCTA
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MGAIDAFTKTFSIVLANKRLYLLVLAMALILALLSIYLIPSDFEYTYNQTSIQKGNVIVEEYGTPITEDEMDILIEFFKG LMIYLIITIVLSSIVEYGITKGIFTYLNDEDYSLSELLADGLKHFPGVLVINIIYSLIMLVFISVATIPMVVGALFLPAG AVLILIGVVLLFLVLAFTLGLSSMAIPLYADKGTIGAAFEAFGLGFRNVLSTVGFGALLGVAAIGIAIIASPLAFIIQLT LPENLAPYVSAFVQAPLDALLYFFLWAGGVAFYRELQRMEELKKVDEELVGLGIEI
Sequences:
>Translated_296_residues MGAIDAFTKTFSIVLANKRLYLLVLAMALILALLSIYLIPSDFEYTYNQTSIQKGNVIVEEYGTPITEDEMDILIEFFKG LMIYLIITIVLSSIVEYGITKGIFTYLNDEDYSLSELLADGLKHFPGVLVINIIYSLIMLVFISVATIPMVVGALFLPAG AVLILIGVVLLFLVLAFTLGLSSMAIPLYADKGTIGAAFEAFGLGFRNVLSTVGFGALLGVAAIGIAIIASPLAFIIQLT LPENLAPYVSAFVQAPLDALLYFFLWAGGVAFYRELQRMEELKKVDEELVGLGIEI >Mature_295_residues GAIDAFTKTFSIVLANKRLYLLVLAMALILALLSIYLIPSDFEYTYNQTSIQKGNVIVEEYGTPITEDEMDILIEFFKGL MIYLIITIVLSSIVEYGITKGIFTYLNDEDYSLSELLADGLKHFPGVLVINIIYSLIMLVFISVATIPMVVGALFLPAGA VLILIGVVLLFLVLAFTLGLSSMAIPLYADKGTIGAAFEAFGLGFRNVLSTVGFGALLGVAAIGIAIIASPLAFIIQLTL PENLAPYVSAFVQAPLDALLYFFLWAGGVAFYRELQRMEELKKVDEELVGLGIEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32191; Mature: 32060
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAIDAFTKTFSIVLANKRLYLLVLAMALILALLSIYLIPSDFEYTYNQTSIQKGNVIVE CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHH EYGTPITEDEMDILIEFFKGLMIYLIITIVLSSIVEYGITKGIFTYLNDEDYSLSELLAD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GLKHFPGVLVINIIYSLIMLVFISVATIPMVVGALFLPAGAVLILIGVVLLFLVLAFTLG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSSMAIPLYADKGTIGAAFEAFGLGFRNVLSTVGFGALLGVAAIGIAIIASPLAFIIQLT HHHHCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPENLAPYVSAFVQAPLDALLYFFLWAGGVAFYRELQRMEELKKVDEELVGLGIEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GAIDAFTKTFSIVLANKRLYLLVLAMALILALLSIYLIPSDFEYTYNQTSIQKGNVIVE CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHH EYGTPITEDEMDILIEFFKGLMIYLIITIVLSSIVEYGITKGIFTYLNDEDYSLSELLAD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GLKHFPGVLVINIIYSLIMLVFISVATIPMVVGALFLPAGAVLILIGVVLLFLVLAFTLG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSSMAIPLYADKGTIGAAFEAFGLGFRNVLSTVGFGALLGVAAIGIAIIASPLAFIIQLT HHHHCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPENLAPYVSAFVQAPLDALLYFFLWAGGVAFYRELQRMEELKKVDEELVGLGIEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA