| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223497
Identifier: 212223497
GI number: 212223497
Start: 325364
End: 326263
Strand: Reverse
Name: 212223497
Synonym: TON_0351
Alternate gene names: NA
Gene position: 326263-325364 (Counterclockwise)
Preceding gene: 212223499
Following gene: 212223494
Centisome position: 17.66
GC content: 48.89
Gene sequence:
>900_bases ATGCCAATTTCAACTAACGATCTAATTAGAACTCTCAATAGTTGGAAGTTCTGGGCAGTCCTGCTGCTGGCCATTCTCGT GACCTATGTCTTGTTCTTCCCTATCTTCAAGCCCCTTATGGAAGATTACAGCGAGCTGAAGTCCTTTGAGATGCAAATGG TGAAGGAGCACGATGCAATGGTCTGCCACCAGATATACTCAATGAATTCCGGCATCTTTGAGAGAATCAATGCGACCTGT GATAACGAATACTACCGTCCCAACATCTCGACAACAACATACAAAGGTTTGGTGGTTTACAGGGACACATACGAGAAGTT TCAAGATGCTAGGAGAAGAACACTGGATGATCTTCACAAGGTGATTCCACTTCTTCCCCTCCTGGCGGTTCTGATGCTGT ACTTCAACTACGTTCTCGTTGACACGGAATACCTCCTCATGAAGGGCACAGAGCCGGCCCTTAGAGATGCCCTCTTGAAG GGACTCAACTCAATTCCTGGGCTTATTATAGCGGAGTTGACGACCCTGCTGGCGGTGTTTCTAATCGGCGTCATCCTCGC AGTATCTTTAGCAGCGATTTTCGGCGAGCTTGGAATAATGCTGGTGGCTTTCCTGATAATGCCCGCACTCTCACTGGTGA CCCCCACCTACTACTTCACGCGCCTTGTTATCCCTATAGAGGAGATTCTAAGAACCGCCAAAAGATGCCCCGGTGGATAC ACCGTGCTTGGTCTTCTAATTATGATCGTCGGCTGGCTGTTCGAGGCGGCTTATACTCATTACCTAGGCATTTGGAGCGC GGCAATTCTGGCGCTGCTTGGTCTCGTGAAGTACATGTTGGACAGTCTTGCGGCTCTCGTTGTTTATCTCGGCGGAACTG AGGGAGAAAAGACAGGATAG
Upstream 100 bases:
>100_bases TTGGTTGATTAATGAGTGCTTAAAAGCTTTGTTGAGATCCGATGAGGTTTGACACCAGAAATTTTAAGAAGGGTTCAATG TACTTTTATCAGATGTAACT
Downstream 100 bases:
>100_bases CCGTAATCATTCCTCAAACTCCACTCCTTCACCCTCTTCCTCTTCTGTCAGCTCCCTAATTTCATAAACCTTGAGCGGAA CCTTCTTGAGGGCCTTCCCG
Product: transmembrane efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MPISTNDLIRTLNSWKFWAVLLLAILVTYVLFFPIFKPLMEDYSELKSFEMQMVKEHDAMVCHQIYSMNSGIFERINATC DNEYYRPNISTTTYKGLVVYRDTYEKFQDARRRTLDDLHKVIPLLPLLAVLMLYFNYVLVDTEYLLMKGTEPALRDALLK GLNSIPGLIIAELTTLLAVFLIGVILAVSLAAIFGELGIMLVAFLIMPALSLVTPTYYFTRLVIPIEEILRTAKRCPGGY TVLGLLIMIVGWLFEAAYTHYLGIWSAAILALLGLVKYMLDSLAALVVYLGGTEGEKTG
Sequences:
>Translated_299_residues MPISTNDLIRTLNSWKFWAVLLLAILVTYVLFFPIFKPLMEDYSELKSFEMQMVKEHDAMVCHQIYSMNSGIFERINATC DNEYYRPNISTTTYKGLVVYRDTYEKFQDARRRTLDDLHKVIPLLPLLAVLMLYFNYVLVDTEYLLMKGTEPALRDALLK GLNSIPGLIIAELTTLLAVFLIGVILAVSLAAIFGELGIMLVAFLIMPALSLVTPTYYFTRLVIPIEEILRTAKRCPGGY TVLGLLIMIVGWLFEAAYTHYLGIWSAAILALLGLVKYMLDSLAALVVYLGGTEGEKTG >Mature_298_residues PISTNDLIRTLNSWKFWAVLLLAILVTYVLFFPIFKPLMEDYSELKSFEMQMVKEHDAMVCHQIYSMNSGIFERINATCD NEYYRPNISTTTYKGLVVYRDTYEKFQDARRRTLDDLHKVIPLLPLLAVLMLYFNYVLVDTEYLLMKGTEPALRDALLKG LNSIPGLIIAELTTLLAVFLIGVILAVSLAAIFGELGIMLVAFLIMPALSLVTPTYYFTRLVIPIEEILRTAKRCPGGYT VLGLLIMIVGWLFEAAYTHYLGIWSAAILALLGLVKYMLDSLAALVVYLGGTEGEKTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33708; Mature: 33576
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISTNDLIRTLNSWKFWAVLLLAILVTYVLFFPIFKPLMEDYSELKSFEMQMVKEHDAM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCHQIYSMNSGIFERINATCDNEYYRPNISTTTYKGLVVYRDTYEKFQDARRRTLDDLHK HHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHH VIPLLPLLAVLMLYFNYVLVDTEYLLMKGTEPALRDALLKGLNSIPGLIIAELTTLLAVF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LIGVILAVSLAAIFGELGIMLVAFLIMPALSLVTPTYYFTRLVIPIEEILRTAKRCPGGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TVLGLLIMIVGWLFEAAYTHYLGIWSAAILALLGLVKYMLDSLAALVVYLGGTEGEKTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PISTNDLIRTLNSWKFWAVLLLAILVTYVLFFPIFKPLMEDYSELKSFEMQMVKEHDAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCHQIYSMNSGIFERINATCDNEYYRPNISTTTYKGLVVYRDTYEKFQDARRRTLDDLHK HHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHH VIPLLPLLAVLMLYFNYVLVDTEYLLMKGTEPALRDALLKGLNSIPGLIIAELTTLLAVF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LIGVILAVSLAAIFGELGIMLVAFLIMPALSLVTPTYYFTRLVIPIEEILRTAKRCPGGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TVLGLLIMIVGWLFEAAYTHYLGIWSAAILALLGLVKYMLDSLAALVVYLGGTEGEKTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA