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The map label for this gene is 212223394

Identifier: 212223394

GI number: 212223394

Start: 222743

End: 223339

Strand: Reverse

Name: 212223394

Synonym: TON_0248

Alternate gene names: NA

Gene position: 223339-222743 (Counterclockwise)

Preceding gene: 212223395

Following gene: 212223393

Centisome position: 12.09

GC content: 53.6

Gene sequence:

>597_bases
ATGAATCTCTCCCTTGGGGAGCGTTTCCACCGAAGGGAGCTGGAAGACCTAGCCATCTCTTTCCTCGTCCTCGTCTTGCT
ATTTTCCAACTTTGACCCCTATAACATCCCCTACGTTGTAGTGGCGGTTCTGACGGCCTTTATATTCCACGAACTCGCTC
ATAGAAGCATGGCCAGGCGCTATGGCTACGTTGCCTACTATAAGCGGTGGGACACTGGAATAGTGATGGCCCTTCTCCTT
GGCATACTTACGAAGCTCTTAACGGGGGGAGTGTGGATATTTGCAGCCCTGGGGGCGGTTTATATCTACGCGCCTTATCA
GTACTGGGAGGATAAGGAGGCACATGGAAAGATAAGCCTCGTCGGCCCGTTGACGAACATAGTGATAGGCATAGTGGCCA
TAATCATGATGAGGGCGGTTACGCCGCTCACAACGCTGTGGTGGGTTCTCAGGACAACCGCGAGCGTGAACCTCTGGCTG
GCCTTCTTCAATCTCCTTCCGGTTCCTCCGCTCGATGGCTGGAAGGTGCTCCGCTGGAACACCGGCTACTGGGCGATAGC
CATAGGTGTGGCCTATCTGCTTAGGGCCTTTATATAA

Upstream 100 bases:

>100_bases
ATGTTCCAGAGGATCAGGTGAGGATAGCCGTTGGTAGCGGCGGTGCTGCAGTGAAAGCTGCCGAGCTCGTTATCGGCAAG
AAGATTGAGGTGAAAAGTAA

Downstream 100 bases:

>100_bases
CACCCACAGTGATATAGAAGCGAAAGATTAAATAGGCCTGGAACGACTTTAGAGCGGTGATCAAAATGGAGTACAAAGCT
CCGATTGGTGTTAAGATTGA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNLSLGERFHRRELEDLAISFLVLVLLFSNFDPYNIPYVVVAVLTAFIFHELAHRSMARRYGYVAYYKRWDTGIVMALLL
GILTKLLTGGVWIFAALGAVYIYAPYQYWEDKEAHGKISLVGPLTNIVIGIVAIIMMRAVTPLTTLWWVLRTTASVNLWL
AFFNLLPVPPLDGWKVLRWNTGYWAIAIGVAYLLRAFI

Sequences:

>Translated_198_residues
MNLSLGERFHRRELEDLAISFLVLVLLFSNFDPYNIPYVVVAVLTAFIFHELAHRSMARRYGYVAYYKRWDTGIVMALLL
GILTKLLTGGVWIFAALGAVYIYAPYQYWEDKEAHGKISLVGPLTNIVIGIVAIIMMRAVTPLTTLWWVLRTTASVNLWL
AFFNLLPVPPLDGWKVLRWNTGYWAIAIGVAYLLRAFI
>Mature_198_residues
MNLSLGERFHRRELEDLAISFLVLVLLFSNFDPYNIPYVVVAVLTAFIFHELAHRSMARRYGYVAYYKRWDTGIVMALLL
GILTKLLTGGVWIFAALGAVYIYAPYQYWEDKEAHGKISLVGPLTNIVIGIVAIIMMRAVTPLTTLWWVLRTTASVNLWL
AFFNLLPVPPLDGWKVLRWNTGYWAIAIGVAYLLRAFI

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22628; Mature: 22628

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSLGERFHRRELEDLAISFLVLVLLFSNFDPYNIPYVVVAVLTAFIFHELAHRSMARR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YGYVAYYKRWDTGIVMALLLGILTKLLTGGVWIFAALGAVYIYAPYQYWEDKEAHGKISL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEE
VGPLTNIVIGIVAIIMMRAVTPLTTLWWVLRTTASVNLWLAFFNLLPVPPLDGWKVLRWN
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
TGYWAIAIGVAYLLRAFI
CCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNLSLGERFHRRELEDLAISFLVLVLLFSNFDPYNIPYVVVAVLTAFIFHELAHRSMARR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YGYVAYYKRWDTGIVMALLLGILTKLLTGGVWIFAALGAVYIYAPYQYWEDKEAHGKISL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEE
VGPLTNIVIGIVAIIMMRAVTPLTTLWWVLRTTASVNLWLAFFNLLPVPPLDGWKVLRWN
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
TGYWAIAIGVAYLLRAFI
CCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]