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The map label for this gene is 212223395

Identifier: 212223395

GI number: 212223395

Start: 223336

End: 223515

Strand: Reverse

Name: 212223395

Synonym: TON_0249

Alternate gene names: NA

Gene position: 223515-223336 (Counterclockwise)

Preceding gene: 212223396

Following gene: 212223394

Centisome position: 12.1

GC content: 48.33

Gene sequence:

>180_bases
ATGAAGGACAGGCTGGAGAAGATGCTCAACGTTAAGATCTTGGAGATAGAGGAACTCGACGACAAGATAGTTGTCTATGT
TCCAGAGGATCAGGTGAGGATAGCCGTTGGTAGCGGCGGTGCTGCAGTGAAAGCTGCCGAGCTCGTTATCGGCAAGAAGA
TTGAGGTGAAAAGTAAATGA

Upstream 100 bases:

>100_bases
GGCTATGTGATGATGTTCTACAAGGGAAGGACCATCTGGGACTTCGACTGATTTCGTTACTTTTATATTTGGAACCGCCG
AGCATTCTTGGGGATTCACC

Downstream 100 bases:

>100_bases
ATCTCTCCCTTGGGGAGCGTTTCCACCGAAGGGAGCTGGAAGACCTAGCCATCTCTTTCCTCGTCCTCGTCTTGCTATTT
TCCAACTTTGACCCCTATAA

Product: RNA-binding protein, containing KH domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MKDRLEKMLNVKILEIEELDDKIVVYVPEDQVRIAVGSGGAAVKAAELVIGKKIEVKSK

Sequences:

>Translated_59_residues
MKDRLEKMLNVKILEIEELDDKIVVYVPEDQVRIAVGSGGAAVKAAELVIGKKIEVKSK
>Mature_59_residues
MKDRLEKMLNVKILEIEELDDKIVVYVPEDQVRIAVGSGGAAVKAAELVIGKKIEVKSK

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6508; Mature: 6508

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDRLEKMLNVKILEIEELDDKIVVYVPEDQVRIAVGSGGAAVKAAELVIGKKIEVKSK
CCHHHHHHHCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCEEEEEEEECCEEEEECC
>Mature Secondary Structure
MKDRLEKMLNVKILEIEELDDKIVVYVPEDQVRIAVGSGGAAVKAAELVIGKKIEVKSK
CCHHHHHHHCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCEEEEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA