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The map label for this gene is yfbQ [C]

Identifier: 212223377

GI number: 212223377

Start: 210287

End: 211486

Strand: Reverse

Name: yfbQ [C]

Synonym: TON_0231

Alternate gene names: 212223377

Gene position: 211486-210287 (Counterclockwise)

Preceding gene: 212223390

Following gene: 212223373

Centisome position: 11.45

GC content: 54.17

Gene sequence:

>1200_bases
ATGATTCGCGCATCCGAAAGGGCTATGGGGATTGAATACGCCATAAGGGACGTTGTTCTTCCTGCCAGGGAGCTTGAGAA
GAAGGGAATAAAGGTAATCAGGCTCAATATTGGTGACCCCGGAAAGTACGATTTCCAGCCGCCGAAACACATGAGGGACG
CCTACTGTAAGGCTATCCAGGAGGGCCACAACTACTACGGTCCGAGCGAGGGCCTGCCCGAGCTTAGGGAAGCAATAGTA
GAGCGCGAGAAAAGGAAAAACGACGTGGATATAACCCCCGACGACGTCCGTGTTACGGCCGCAGTCACGGAGGCGCTCCA
GTTCCTCTTCGGCGCTCTGCTCAATCCTGGTGACAACATCCTCGTGCCGAGCCCGAGCTATCCACCCTACACCGGCCTCG
TTAAGTTCTATGAGGGAGTACCCAGGGAGTACCTGACGGTTGAAGAGAACGGCTGGCAGCCTGACATAGACGACATGAGA
AAGAAGATAGACGAGAAAACCAAGGCCATAGCTGTAATCAACCCGAACAACCCAACAGGAGCGCTTTACGAGAAGAAGAC
TATAAAGGAGATTCTCGACTTAGCGGGTGAATATGACCTTCCGGTCATAAGCGACGAGATATACGACCTCATGACCTACG
AGGGAGAGCACGTCTCTCCGGGCTCACTCACCAAGGACGTCCCGGTCATCGTCATGAACGGCCTCTCGAAGGTTTACTTC
GCAACAGGCTGGCGTCTCGGCTATTTCTACTACGTTGATCCCGAGGGCAAGCTCGATGAGATTCGAGAAGCTGTCGACAA
AATGGCGAGAATCAGACTGTGCCCAAATACACCCGCCCAGTTCGCCGCAATAGCGGGTCTCACCGGCCCGATGGACTATC
TCGAGGAGTACATGGCCAAGCTTAAGGAGAGGAGAGATTACATATACAAGCGCCTGACCGAGATTCCAGGAATAAGCACC
GTCAAGCCTCAGGGAGCATTCTACATCTTCCCGAAGATAGAGGAGCGCTCCAAGTGGAAGAACGACAAGGAGTTCGTGCT
CGATGCCCTCAACGAGGCTCACGTACTCTTCGTCCATGGCTCAGGCTTTGGCTACGCCGGTGAGTGGCACTTCAGGATAG
TCTTCCTGCCGCCGGTCGAGATTCTCGAGGAGGCCATGGATAACTTCGAGGCGTTCATGAGGAAGAGGCTGAGTTCCTGA

Upstream 100 bases:

>100_bases
TAAAGTTGCCCCAGCTTTTCTGAATGCCTTTCTCTTTGAACCTTGCCTGGGAATGTGAAGATTTTTATGAGGAATCCTTC
AACTGCCTTTGGTGGTGCTC

Downstream 100 bases:

>100_bases
TTCCCTCTCCATTTTCTCTGTTAGAGAAAGAAAAATAATGGGAGTTCTCATGGACCGATTATTTTGTAGGCTTTTACGCT
GTTCCATGTTTTGATGTAAA

Product: alanine aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MIRASERAMGIEYAIRDVVLPARELEKKGIKVIRLNIGDPGKYDFQPPKHMRDAYCKAIQEGHNYYGPSEGLPELREAIV
EREKRKNDVDITPDDVRVTAAVTEALQFLFGALLNPGDNILVPSPSYPPYTGLVKFYEGVPREYLTVEENGWQPDIDDMR
KKIDEKTKAIAVINPNNPTGALYEKKTIKEILDLAGEYDLPVISDEIYDLMTYEGEHVSPGSLTKDVPVIVMNGLSKVYF
ATGWRLGYFYYVDPEGKLDEIREAVDKMARIRLCPNTPAQFAAIAGLTGPMDYLEEYMAKLKERRDYIYKRLTEIPGIST
VKPQGAFYIFPKIEERSKWKNDKEFVLDALNEAHVLFVHGSGFGYAGEWHFRIVFLPPVEILEEAMDNFEAFMRKRLSS

Sequences:

>Translated_399_residues
MIRASERAMGIEYAIRDVVLPARELEKKGIKVIRLNIGDPGKYDFQPPKHMRDAYCKAIQEGHNYYGPSEGLPELREAIV
EREKRKNDVDITPDDVRVTAAVTEALQFLFGALLNPGDNILVPSPSYPPYTGLVKFYEGVPREYLTVEENGWQPDIDDMR
KKIDEKTKAIAVINPNNPTGALYEKKTIKEILDLAGEYDLPVISDEIYDLMTYEGEHVSPGSLTKDVPVIVMNGLSKVYF
ATGWRLGYFYYVDPEGKLDEIREAVDKMARIRLCPNTPAQFAAIAGLTGPMDYLEEYMAKLKERRDYIYKRLTEIPGIST
VKPQGAFYIFPKIEERSKWKNDKEFVLDALNEAHVLFVHGSGFGYAGEWHFRIVFLPPVEILEEAMDNFEAFMRKRLSS
>Mature_399_residues
MIRASERAMGIEYAIRDVVLPARELEKKGIKVIRLNIGDPGKYDFQPPKHMRDAYCKAIQEGHNYYGPSEGLPELREAIV
EREKRKNDVDITPDDVRVTAAVTEALQFLFGALLNPGDNILVPSPSYPPYTGLVKFYEGVPREYLTVEENGWQPDIDDMR
KKIDEKTKAIAVINPNNPTGALYEKKTIKEILDLAGEYDLPVISDEIYDLMTYEGEHVSPGSLTKDVPVIVMNGLSKVYF
ATGWRLGYFYYVDPEGKLDEIREAVDKMARIRLCPNTPAQFAAIAGLTGPMDYLEEYMAKLKERRDYIYKRLTEIPGIST
VKPQGAFYIFPKIEERSKWKNDKEFVLDALNEAHVLFVHGSGFGYAGEWHFRIVFLPPVEILEEAMDNFEAFMRKRLSS

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=402, Percent_Identity=29.6019900497512, Blast_Score=168, Evalue=6e-42,
Organism=Homo sapiens, GI19263340, Length=460, Percent_Identity=26.5217391304348, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI215599424, Length=369, Percent_Identity=25.7452574525745, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI4885351, Length=450, Percent_Identity=26, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI95147551, Length=328, Percent_Identity=25.3048780487805, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI169881279, Length=328, Percent_Identity=25.3048780487805, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI56713254, Length=327, Percent_Identity=25.3822629969419, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI56713256, Length=327, Percent_Identity=25.3822629969419, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI169881281, Length=198, Percent_Identity=25.2525252525253, Blast_Score=83, Evalue=6e-16,
Organism=Escherichia coli, GI1788627, Length=398, Percent_Identity=37.4371859296482, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1788722, Length=379, Percent_Identity=29.8153034300792, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1786816, Length=293, Percent_Identity=26.2798634812287, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788332, Length=253, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17567663, Length=373, Percent_Identity=32.171581769437, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI71981209, Length=468, Percent_Identity=25, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17567369, Length=257, Percent_Identity=25.2918287937743, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994476, Length=266, Percent_Identity=27.8195488721804, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71994472, Length=266, Percent_Identity=27.8195488721804, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71981215, Length=305, Percent_Identity=23.2786885245902, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320317, Length=455, Percent_Identity=26.5934065934066, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323118, Length=357, Percent_Identity=28.8515406162465, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6322401, Length=315, Percent_Identity=22.5396825396825, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI18859735, Length=402, Percent_Identity=28.6069651741293, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24641770, Length=462, Percent_Identity=27.4891774891775, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24641760, Length=462, Percent_Identity=27.4891774891775, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24641768, Length=462, Percent_Identity=27.4891774891775, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24641766, Length=462, Percent_Identity=27.4891774891775, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24641764, Length=462, Percent_Identity=27.4891774891775, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI45551451, Length=462, Percent_Identity=27.4891774891775, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI28573069, Length=258, Percent_Identity=25.5813953488372, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24646114, Length=258, Percent_Identity=25.5813953488372, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28573067, Length=258, Percent_Identity=25.5813953488372, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28573065, Length=258, Percent_Identity=25.5813953488372, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 45524; Mature: 45524

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRASERAMGIEYAIRDVVLPARELEKKGIKVIRLNIGDPGKYDFQPPKHMRDAYCKAIQ
CCCCCCHHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
EGHNYYGPSEGLPELREAIVEREKRKNDVDITPDDVRVTAAVTEALQFLFGALLNPGDNI
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCE
LVPSPSYPPYTGLVKFYEGVPREYLTVEENGWQPDIDDMRKKIDEKTKAIAVINPNNPTG
EECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEECCCCCCC
ALYEKKTIKEILDLAGEYDLPVISDEIYDLMTYEGEHVSPGSLTKDVPVIVMNGLSKVYF
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHH
ATGWRLGYFYYVDPEGKLDEIREAVDKMARIRLCPNTPAQFAAIAGLTGPMDYLEEYMAK
CCCEEEEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCHHHHHHHHHH
LKERRDYIYKRLTEIPGISTVKPQGAFYIFPKIEERSKWKNDKEFVLDALNEAHVLFVHG
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCCCHHHHHHHCCCCEEEEEEC
SGFGYAGEWHFRIVFLPPVEILEEAMDNFEAFMRKRLSS
CCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRASERAMGIEYAIRDVVLPARELEKKGIKVIRLNIGDPGKYDFQPPKHMRDAYCKAIQ
CCCCCCHHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
EGHNYYGPSEGLPELREAIVEREKRKNDVDITPDDVRVTAAVTEALQFLFGALLNPGDNI
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCE
LVPSPSYPPYTGLVKFYEGVPREYLTVEENGWQPDIDDMRKKIDEKTKAIAVINPNNPTG
EECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEECCCCCCC
ALYEKKTIKEILDLAGEYDLPVISDEIYDLMTYEGEHVSPGSLTKDVPVIVMNGLSKVYF
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHH
ATGWRLGYFYYVDPEGKLDEIREAVDKMARIRLCPNTPAQFAAIAGLTGPMDYLEEYMAK
CCCEEEEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCHHHHHHHHHH
LKERRDYIYKRLTEIPGISTVKPQGAFYIFPKIEERSKWKNDKEFVLDALNEAHVLFVHG
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCCCHHHHHHHCCCCEEEEEEC
SGFGYAGEWHFRIVFLPPVEILEEAMDNFEAFMRKRLSS
CCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]