| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223373
Identifier: 212223373
GI number: 212223373
Start: 205689
End: 206954
Strand: Reverse
Name: 212223373
Synonym: TON_0227
Alternate gene names: NA
Gene position: 206954-205689 (Counterclockwise)
Preceding gene: 212223377
Following gene: 212223372
Centisome position: 11.2
GC content: 54.03
Gene sequence:
>1266_bases ATGACCCAACTCTTCAACTCCAAGCTCTGTGCCGTCTGCAAGGGCAAGAAACTCCTCTGCGGCAGGCCCACCTGTCCAAT TCTCGAAAGGTTTAGGGTAGCCCATAGGGTGGAGGAAAAGCTCAATAAGCGCCACCTTTTTGGCTCTTCCCCGCCGAGCA TCTTCGTTGGGGAGTACGGCTACCCTAAGGTTCGCATAGGCCCTCTCGTGCCGCCGATTGAGGGAGATACCAGTCACCTC GACAGTCCCATGAAGTGGGAGGACAAGACGATAAGGGACATCCTTTACTACCGCTCGCTATTGGTTATGGGCGAGACGAA AGCAGACGTCCACGTAAGGAGGAGCGGGAGAATACTTGGCGAGGTTCAGGAGCTGGCAATGTCGATAAAGCCCGTTGACA GCGAGATTTTGCTGAAGAAAAAGCCCGTTCTCAAAGTCCTCCCAAGCGAGTTTGCCCCGCCGATAGGGCCGAAGGCGGAG CTTTTGGACTTTGAGCTCACGGAGAATCCAAGGATTCCGAGGAGGACCGACTATGTCGTGAGCGACGAGCTGAAGGCGGA GCAGGCAATAATGAGGCTTTACAACTGGGGCTTTGACGAGTACTATATTATAAGGCTCCTCTCCGCGGGACTTCTCGGCG TTGACAAGAGGCTTGTTCCCACAAGGTGGAGCATCACCGCCGTTCAGGACACGATAGGGAATAACCTAAGGCGCGAAATT CTGAGCTATCCAGAGATAAACGACTACGAGGTCTACTTCTACCGCTTCCTCGGAAACCGCTACGCTGTTCTTCTCATGCC TGAGAGCTATGCCTTCGAACTCCTTGAGGTGTGGCTCAAGGGCTCGCTCTTCGGAAGCGACGAACCGAGCGTCATCCACG ACTACGAGGACTTCCGCGGAAGAAAGGAGTACGTCAAGGAAACGGCCGGCGCCTACCATGCAGCTCGTCTGAGCGTTCTT GAAGCTTTGAGAGTGAGGAGGAGACAGGCAAGGATAGTAGTTTTCCGCGAGGTTACTCCCGAGTACTACGCCCCCGTTGG TGTCTGGCAGATAAGGCTCGGCGTCAAGAAAGCTATGAACAACCTCATCGGTCGCTTCTCAACGCTGAACGAGGCGCTAG AGGCCATAAAGCGCCGTCTTGAGCATCCGTTCGAGAAGTACCTCACGAGGAGCTACATACTTGGCAGCTTAGCGAGGCAG AAAACTTTAGACGAGTGGCTCGGAAAGAATTTATACCGGATTAACAAAGGGAACTACGGTGGATGA
Upstream 100 bases:
>100_bases CGAGTTATATGAGCCGGAGGGGGTTTTTAAGTTTTTTGGAAGGTACTCGAGATGCCAGCGTTGGCAAACCATAAATACCT TCCCCGAGTAACTATCCCCG
Downstream 100 bases:
>100_bases CGATCACTCCATCCCACTGAAGTATGATGACTGCACGTCAGGCCGACACCGATTGGGGGTGATAGCGTGAGTGAGGATGT TAGAGTGATTAACGAAATAT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MTQLFNSKLCAVCKGKKLLCGRPTCPILERFRVAHRVEEKLNKRHLFGSSPPSIFVGEYGYPKVRIGPLVPPIEGDTSHL DSPMKWEDKTIRDILYYRSLLVMGETKADVHVRRSGRILGEVQELAMSIKPVDSEILLKKKPVLKVLPSEFAPPIGPKAE LLDFELTENPRIPRRTDYVVSDELKAEQAIMRLYNWGFDEYYIIRLLSAGLLGVDKRLVPTRWSITAVQDTIGNNLRREI LSYPEINDYEVYFYRFLGNRYAVLLMPESYAFELLEVWLKGSLFGSDEPSVIHDYEDFRGRKEYVKETAGAYHAARLSVL EALRVRRRQARIVVFREVTPEYYAPVGVWQIRLGVKKAMNNLIGRFSTLNEALEAIKRRLEHPFEKYLTRSYILGSLARQ KTLDEWLGKNLYRINKGNYGG
Sequences:
>Translated_421_residues MTQLFNSKLCAVCKGKKLLCGRPTCPILERFRVAHRVEEKLNKRHLFGSSPPSIFVGEYGYPKVRIGPLVPPIEGDTSHL DSPMKWEDKTIRDILYYRSLLVMGETKADVHVRRSGRILGEVQELAMSIKPVDSEILLKKKPVLKVLPSEFAPPIGPKAE LLDFELTENPRIPRRTDYVVSDELKAEQAIMRLYNWGFDEYYIIRLLSAGLLGVDKRLVPTRWSITAVQDTIGNNLRREI LSYPEINDYEVYFYRFLGNRYAVLLMPESYAFELLEVWLKGSLFGSDEPSVIHDYEDFRGRKEYVKETAGAYHAARLSVL EALRVRRRQARIVVFREVTPEYYAPVGVWQIRLGVKKAMNNLIGRFSTLNEALEAIKRRLEHPFEKYLTRSYILGSLARQ KTLDEWLGKNLYRINKGNYGG >Mature_420_residues TQLFNSKLCAVCKGKKLLCGRPTCPILERFRVAHRVEEKLNKRHLFGSSPPSIFVGEYGYPKVRIGPLVPPIEGDTSHLD SPMKWEDKTIRDILYYRSLLVMGETKADVHVRRSGRILGEVQELAMSIKPVDSEILLKKKPVLKVLPSEFAPPIGPKAEL LDFELTENPRIPRRTDYVVSDELKAEQAIMRLYNWGFDEYYIIRLLSAGLLGVDKRLVPTRWSITAVQDTIGNNLRREIL SYPEINDYEVYFYRFLGNRYAVLLMPESYAFELLEVWLKGSLFGSDEPSVIHDYEDFRGRKEYVKETAGAYHAARLSVLE ALRVRRRQARIVVFREVTPEYYAPVGVWQIRLGVKKAMNNLIGRFSTLNEALEAIKRRLEHPFEKYLTRSYILGSLARQK TLDEWLGKNLYRINKGNYGG
Specific function: Unknown
COG id: COG1602
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48637; Mature: 48506
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLFNSKLCAVCKGKKLLCGRPTCPILERFRVAHRVEEKLNKRHLFGSSPPSIFVGEYG CCCCCCCCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC YPKVRIGPLVPPIEGDTSHLDSPMKWEDKTIRDILYYRSLLVMGETKADVHVRRSGRILG CCEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHH EVQELAMSIKPVDSEILLKKKPVLKVLPSEFAPPIGPKAELLDFELTENPRIPRRTDYVV HHHHHHHHHCCCCHHHHHCCCCHHHHCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEE SDELKAEQAIMRLYNWGFDEYYIIRLLSAGLLGVDKRLVPTRWSITAVQDTIGNNLRREI CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHH LSYPEINDYEVYFYRFLGNRYAVLLMPESYAFELLEVWLKGSLFGSDEPSVIHDYEDFRG HCCCCCCCHHEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCC RKEYVKETAGAYHAARLSVLEALRVRRRQARIVVFREVTPEYYAPVGVWQIRLGVKKAMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHCCCCHHHHHHHHHHHHH NLIGRFSTLNEALEAIKRRLEHPFEKYLTRSYILGSLARQKTLDEWLGKNLYRINKGNYG HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC G C >Mature Secondary Structure TQLFNSKLCAVCKGKKLLCGRPTCPILERFRVAHRVEEKLNKRHLFGSSPPSIFVGEYG CCCCCCCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC YPKVRIGPLVPPIEGDTSHLDSPMKWEDKTIRDILYYRSLLVMGETKADVHVRRSGRILG CCEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHH EVQELAMSIKPVDSEILLKKKPVLKVLPSEFAPPIGPKAELLDFELTENPRIPRRTDYVV HHHHHHHHHCCCCHHHHHCCCCHHHHCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEE SDELKAEQAIMRLYNWGFDEYYIIRLLSAGLLGVDKRLVPTRWSITAVQDTIGNNLRREI CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHH LSYPEINDYEVYFYRFLGNRYAVLLMPESYAFELLEVWLKGSLFGSDEPSVIHDYEDFRG HCCCCCCCHHEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCC RKEYVKETAGAYHAARLSVLEALRVRRRQARIVVFREVTPEYYAPVGVWQIRLGVKKAMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHCCCCHHHHHHHHHHHHH NLIGRFSTLNEALEAIKRRLEHPFEKYLTRSYILGSLARQKTLDEWLGKNLYRINKGNYG HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA