| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223370
Identifier: 212223370
GI number: 212223370
Start: 203960
End: 205084
Strand: Reverse
Name: 212223370
Synonym: TON_0224
Alternate gene names: NA
Gene position: 205084-203960 (Counterclockwise)
Preceding gene: 212223371
Following gene: 212223357
Centisome position: 11.1
GC content: 53.24
Gene sequence:
>1125_bases ATGAAGAAGCTTGCGCTGATAAGCCTCGACGGCTGTGGGGTTTACAACATCAAACACATGCCATTCCTGAACGAGCTTGC TGAAAGCGGTGAGTTCGCGGTGGTTGACTCCATCTTTCCAACGCTCACGGACTTAGTTCACACCAGCGTGATGACGGGGA TGTGGCCGAAAGATCACGGGGTCGTCGAGAACGGCTACTACGACCGCATCTCTGATCGGAAGGTCAACTTCTACAACTAT GAGGTGGCCTTTAATCCCCACAAGGTCATTAAGTCCCCGACCATCGTTGATCTGCTACGGCAGAAAGGTGTTAAAACCGC AGCCGTCAGCGGCTATACGATGCCCCCGTTCAGCGGGACGGACGTTAGAATCTTCCCACCCTTCTTTGCTGGCGATAGGA TGTACCACCAGCATGGTCGCGATTGGAGGAAGGACATCTGGGTCATGAACTCAGCCATCTACCTATACGAGGAATGCAGA CCGGATTTGCTCCTCGTCCACTTTGCTTCGATAGACGGCATGGGCCACGACTATGGGCCGCTGAGTGAGGGGACTCTAAA GGCCATTGAGACCGTCGATACAGCAGTGAGAACCCTATGGGAGCGCCTGAAGGACGAGTACGCATTCATAATCTTCGCCG ACCATGGACAGGAGGAGGTTCACACCTGGGTGAACCTGAGAACATACCTCCGGAAACACGGCATCGAGACGCTACACGTT TCCTCTGGCGGTGGAGTTCATGTTTATCTCAGAGACCCAAACCAGGCCGAGGAAGCTTTTGAAGTTCTGAGAAAGGCTCC GGGTGTCAAAGAAGTCTTTTTCCGCGATGAGCTTCCACACCTCGATACGCTGCTGAGCGGCGAGCTGATAGTCTCAGCCA AGCCCGGCTACTGGTTCTGCTCCCACAGAATGTGCAGGGGGATTAAGGGAGTAAGTCACTGGGTTAAGGGAATGCACGGC TCAATGAACGAGCCAGTTGTGAAGGTTCCACTGATACTGTGGGGTTTCGAGAAAGTTGAGCTTGAAAACCCTGGCCTCAT GGACATAGCACCGACGGTTCTGGAGTTTTTTGGTGTAGAAAAGCCGGGGAATATGGTGGGAGGGAGTCTGCTAGATAGAA GTTGA
Upstream 100 bases:
>100_bases TTCATAAGGGTCTCCTTGCAGGCATTCTAGGTGAAGTTGGAGACCTACTCAAGGAAGAGATAAACGTAAAACTCTGTAAT ACGCTTAGGCTGTGATGAAC
Downstream 100 bases:
>100_bases ATGGATGAAGGAGAAAGAGGACAAGAATCAGTCCCTTTGGCCTTCTTCATGCTAATTTCGACGCTTTAACTTTTTCCAGT AAATCATAGAACCCATACTA
Product: phosphodiesterase
Products: NA
Alternate protein names: Phosphodiesterase; Type I Phosphodiesterase/Nucleotide Pyrophosphatase Protein; Nucleotide Pyrophosphatase; Pyrophosphatase; Alkaline Phosphodiesterase I; Phosphodiesterase/Nucleotide Pyrophosphatase Family Protein; Type I Phosphodiesterase / Nucleotide Pyrophosphatase; Phosphonoacetate Hydrolase ; Phosphodiesterase I; Phosphonoacetate Hydrolase
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKKLALISLDGCGVYNIKHMPFLNELAESGEFAVVDSIFPTLTDLVHTSVMTGMWPKDHGVVENGYYDRISDRKVNFYNY EVAFNPHKVIKSPTIVDLLRQKGVKTAAVSGYTMPPFSGTDVRIFPPFFAGDRMYHQHGRDWRKDIWVMNSAIYLYEECR PDLLLVHFASIDGMGHDYGPLSEGTLKAIETVDTAVRTLWERLKDEYAFIIFADHGQEEVHTWVNLRTYLRKHGIETLHV SSGGGVHVYLRDPNQAEEAFEVLRKAPGVKEVFFRDELPHLDTLLSGELIVSAKPGYWFCSHRMCRGIKGVSHWVKGMHG SMNEPVVKVPLILWGFEKVELENPGLMDIAPTVLEFFGVEKPGNMVGGSLLDRS
Sequences:
>Translated_374_residues MKKLALISLDGCGVYNIKHMPFLNELAESGEFAVVDSIFPTLTDLVHTSVMTGMWPKDHGVVENGYYDRISDRKVNFYNY EVAFNPHKVIKSPTIVDLLRQKGVKTAAVSGYTMPPFSGTDVRIFPPFFAGDRMYHQHGRDWRKDIWVMNSAIYLYEECR PDLLLVHFASIDGMGHDYGPLSEGTLKAIETVDTAVRTLWERLKDEYAFIIFADHGQEEVHTWVNLRTYLRKHGIETLHV SSGGGVHVYLRDPNQAEEAFEVLRKAPGVKEVFFRDELPHLDTLLSGELIVSAKPGYWFCSHRMCRGIKGVSHWVKGMHG SMNEPVVKVPLILWGFEKVELENPGLMDIAPTVLEFFGVEKPGNMVGGSLLDRS >Mature_374_residues MKKLALISLDGCGVYNIKHMPFLNELAESGEFAVVDSIFPTLTDLVHTSVMTGMWPKDHGVVENGYYDRISDRKVNFYNY EVAFNPHKVIKSPTIVDLLRQKGVKTAAVSGYTMPPFSGTDVRIFPPFFAGDRMYHQHGRDWRKDIWVMNSAIYLYEECR PDLLLVHFASIDGMGHDYGPLSEGTLKAIETVDTAVRTLWERLKDEYAFIIFADHGQEEVHTWVNLRTYLRKHGIETLHV SSGGGVHVYLRDPNQAEEAFEVLRKAPGVKEVFFRDELPHLDTLLSGELIVSAKPGYWFCSHRMCRGIKGVSHWVKGMHG SMNEPVVKVPLILWGFEKVELENPGLMDIAPTVLEFFGVEKPGNMVGGSLLDRS
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI170650661, Length=222, Percent_Identity=26.5765765765766, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42330; Mature: 42330
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLALISLDGCGVYNIKHMPFLNELAESGEFAVVDSIFPTLTDLVHTSVMTGMWPKDHG CCCEEEEEECCCCEEEEECCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCC VVENGYYDRISDRKVNFYNYEVAFNPHKVIKSPTIVDLLRQKGVKTAAVSGYTMPPFSGT EECCCCCCCCCCCEEEEEEEEEEECHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCC DVRIFPPFFAGDRMYHQHGRDWRKDIWVMNSAIYLYEECRPDLLLVHFASIDGMGHDYGP CEEEECCCCCCCHHHHHCCCHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCC LSEGTLKAIETVDTAVRTLWERLKDEYAFIIFADHGQEEVHTWVNLRTYLRKHGIETLHV CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEE SSGGGVHVYLRDPNQAEEAFEVLRKAPGVKEVFFRDELPHLDTLLSGELIVSAKPGYWFC ECCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCCCEEEEECCCCEEH SHRMCRGIKGVSHWVKGMHGSMNEPVVKVPLILWGFEKVELENPGLMDIAPTVLEFFGVE HHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEECCEEEEECCCCCCHHHHHHHHHHCCC KPGNMVGGSLLDRS CCCCCCCCHHCCCC >Mature Secondary Structure MKKLALISLDGCGVYNIKHMPFLNELAESGEFAVVDSIFPTLTDLVHTSVMTGMWPKDHG CCCEEEEEECCCCEEEEECCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCC VVENGYYDRISDRKVNFYNYEVAFNPHKVIKSPTIVDLLRQKGVKTAAVSGYTMPPFSGT EECCCCCCCCCCCEEEEEEEEEEECHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCC DVRIFPPFFAGDRMYHQHGRDWRKDIWVMNSAIYLYEECRPDLLLVHFASIDGMGHDYGP CEEEECCCCCCCHHHHHCCCHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCC LSEGTLKAIETVDTAVRTLWERLKDEYAFIIFADHGQEEVHTWVNLRTYLRKHGIETLHV CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEE SSGGGVHVYLRDPNQAEEAFEVLRKAPGVKEVFFRDELPHLDTLLSGELIVSAKPGYWFC ECCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCCCEEEEECCCCEEH SHRMCRGIKGVSHWVKGMHGSMNEPVVKVPLILWGFEKVELENPGLMDIAPTVLEFFGVE HHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEECCEEEEECCCCCCHHHHHHHHHHCCC KPGNMVGGSLLDRS CCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA