| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223357
Identifier: 212223357
GI number: 212223357
Start: 186994
End: 187683
Strand: Reverse
Name: 212223357
Synonym: TON_0211
Alternate gene names: NA
Gene position: 187683-186994 (Counterclockwise)
Preceding gene: 212223370
Following gene: 212223355
Centisome position: 10.16
GC content: 51.45
Gene sequence:
>690_bases ATGATAATCGCCTTCGACTTTGACGGAACACTCGCCGATACGTACTCATGCATCGAGGAGGCCTTCAGGCGAGCCCTAGA GAAGCGCTACCGCTGGCTCCCATTCAAGGGTTTCTGGGCCAAGGTTCTGACTAAAATCGAGATGTACTTTGAGAGACCAG CCTTCGGGCGTCACAAGAAGAAGTCAGAGCCACCGTTCTTCCTTAGGACTAAGTTCATGGAGACATGGTTTGAGGAGCGG GCGAAGCTCAGTAAGCCTCTCGACGATGCTCCCGAGCTCTTGAAAAGGCTCAAGGAGGAGGGCCACACAGTGATATCTTT CTCGGCCGAGGACTTCATAGATGGCATGAAAGTGAAAAGGCTCAAAGCTATGGGTATCTACGACCTCTTTGACGATGTCA TCGTTTTCGGGCGTGATTTGACGATAGACGAGGCGTTTAAGCTTGTCCGCGAAAAGTACGGGAATGAAGTCTTTATCTGG GTCGATGACAAGCCCTGGCGCTTCATCGGACACGGCGATGAGAACACTGAGTACGTCTGGTACTACTTTCCGTCAACTGC GAGGTTCATAGAAAGAAACCGCGAAAGGCTCGCCCTAATTCCACATCTGCACGTGATACGGGATCTGTGGAGCCTCCTTG ATATGATAGAACGGGTGAAGCAGGAGCGAAAAGAACTCAGTCACCGCTGA
Upstream 100 bases:
>100_bases CACAAGTTTTGAGTCAAAACGTAGCGGGGATTGGGGGAATATTGTGAATTGAGAGGATAAAGCTTAAAGTTCAAAGGGCA TCATTCCGCCGGGGGATAGC
Downstream 100 bases:
>100_bases GATACTCCATGGTGTCCTCCACGAACTCGTCAACGTCCCCTTTTTCAACTTCTTCGAGTTTGAGCCCGAAAGTCTTCCCG AGGTTCCATCTGATAGCGAC
Product: hydrolase, HAD superfamily
Products: NA
Alternate protein names: HAD Superfamily Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Hydrolase
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MIIAFDFDGTLADTYSCIEEAFRRALEKRYRWLPFKGFWAKVLTKIEMYFERPAFGRHKKKSEPPFFLRTKFMETWFEER AKLSKPLDDAPELLKRLKEEGHTVISFSAEDFIDGMKVKRLKAMGIYDLFDDVIVFGRDLTIDEAFKLVREKYGNEVFIW VDDKPWRFIGHGDENTEYVWYYFPSTARFIERNRERLALIPHLHVIRDLWSLLDMIERVKQERKELSHR
Sequences:
>Translated_229_residues MIIAFDFDGTLADTYSCIEEAFRRALEKRYRWLPFKGFWAKVLTKIEMYFERPAFGRHKKKSEPPFFLRTKFMETWFEER AKLSKPLDDAPELLKRLKEEGHTVISFSAEDFIDGMKVKRLKAMGIYDLFDDVIVFGRDLTIDEAFKLVREKYGNEVFIW VDDKPWRFIGHGDENTEYVWYYFPSTARFIERNRERLALIPHLHVIRDLWSLLDMIERVKQERKELSHR >Mature_229_residues MIIAFDFDGTLADTYSCIEEAFRRALEKRYRWLPFKGFWAKVLTKIEMYFERPAFGRHKKKSEPPFFLRTKFMETWFEER AKLSKPLDDAPELLKRLKEEGHTVISFSAEDFIDGMKVKRLKAMGIYDLFDDVIVFGRDLTIDEAFKLVREKYGNEVFIW VDDKPWRFIGHGDENTEYVWYYFPSTARFIERNRERLALIPHLHVIRDLWSLLDMIERVKQERKELSHR
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27663; Mature: 27663
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIAFDFDGTLADTYSCIEEAFRRALEKRYRWLPFKGFWAKVLTKIEMYFERPAFGRHKK CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC KSEPPFFLRTKFMETWFEERAKLSKPLDDAPELLKRLKEEGHTVISFSAEDFIDGMKVKR CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHH LKAMGIYDLFDDVIVFGRDLTIDEAFKLVREKYGNEVFIWVDDKPWRFIGHGDENTEYVW HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCCCEEE YYFPSTARFIERNRERLALIPHLHVIRDLWSLLDMIERVKQERKELSHR EECCCHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIIAFDFDGTLADTYSCIEEAFRRALEKRYRWLPFKGFWAKVLTKIEMYFERPAFGRHKK CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC KSEPPFFLRTKFMETWFEERAKLSKPLDDAPELLKRLKEEGHTVISFSAEDFIDGMKVKR CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHH LKAMGIYDLFDDVIVFGRDLTIDEAFKLVREKYGNEVFIWVDDKPWRFIGHGDENTEYVW HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCCCEEE YYFPSTARFIERNRERLALIPHLHVIRDLWSLLDMIERVKQERKELSHR EECCCHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA