| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223315
Identifier: 212223315
GI number: 212223315
Start: 146837
End: 147436
Strand: Reverse
Name: 212223315
Synonym: TON_0169
Alternate gene names: NA
Gene position: 147436-146837 (Counterclockwise)
Preceding gene: 212223318
Following gene: 212223309
Centisome position: 7.98
GC content: 50.0
Gene sequence:
>600_bases ATGAGGTTCGTGCTCGATACGAGCATCTTTGTCAATCCAGAAATAAGGCGAAAGTTTGGGGACAACCCGACCGAGGCTAT GAGAACATTTCTTGGATATGCTGAGATGCTCTTCGGTAGGGTGGAGTTCTACATGCCCCCCGGTATCTACCGCGAGGTTA TGCATTTCGTCGATGAAGACGAACTCCTGCCTGAAATCGAGCTCTACATCATAAAGAAGCCCCCCAACGTCCACGACATT AAGATTCCCGCCTTTGTAGTCTACGAACTGATTGACGACATAAGGAGGCGCATAGACAAGGGCCTCCGCGTCGCTGAGAA AGCCGTCCGCGAGAGTGTAATCGAAACTGACAACGTCGATAGAATAATCCAGAAGCTGAGGCGGAACTACCGCAAAGCCC TCCGTGAGGGCATCGTTGATAGCAAGGAAGATTTTGAGCTTATCTTACTAGCAAAAGAGCTCGATGCGACGATAGTTTCT GCTGATGTCGGGATACTCACCTGGGCTCAGAAGATGGGCATCAAGTGGATCGACGCGGCCAACTTTCGTGAGGTTCTTGA GGGCCTCGTGGCAAAAATGGGCGAAGGGAAAAATTTATAA
Upstream 100 bases:
>100_bases TTTGGACTTGCCAGCTCGCTTACTCCAAAAACGACTCCGACTCTCATACTTTCCACCTAACTGTTTTAAACTTCCCCGCT TAAATAAGCTTGTGGTGGTC
Downstream 100 bases:
>100_bases ATGCTCACCTGCATGGTATCATCGACGCCCCGGTGGCTCAGCCTGGTGGAGCGGCCGCTTGGTAAGCGGCAGGTCGCGGG TTCAAACCCCGCCCGGGGCT
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDEDELLPEIELYIIKKPPNVHDI KIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVDRIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVS ADVGILTWAQKMGIKWIDAANFREVLEGLVAKMGEGKNL
Sequences:
>Translated_199_residues MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDEDELLPEIELYIIKKPPNVHDI KIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVDRIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVS ADVGILTWAQKMGIKWIDAANFREVLEGLVAKMGEGKNL >Mature_199_residues MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDEDELLPEIELYIIKKPPNVHDI KIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVDRIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVS ADVGILTWAQKMGIKWIDAANFREVLEGLVAKMGEGKNL
Specific function: Unknown
COG id: COG1458
COG function: function code R; Predicted DNA-binding protein containing PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0278 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y169_THEON (B6YSW7)
Other databases:
- EMBL: CP000855 - RefSeq: YP_002306551.1 - GeneID: 7017825 - GenomeReviews: CP000855_GR - KEGG: ton:TON_0169 - HOGENOM: HBG507856 - OMA: KTPNRYE - ProtClustDB: PRK04358 - HAMAP: MF_01078 - InterPro: IPR014856 - InterPro: IPR022785 - TIGRFAMs: TIGR03875
Pfam domain/function: PF08745 UPF0278
EC number: NA
Molecular weight: Translated: 23116; Mature: 23116
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDED CCEEEECCEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHH ELLPEIELYIIKKPPNVHDIKIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVD HCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVSADVGILTWAQKMGIKWIDAA HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC NFREVLEGLVAKMGEGKNL CHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDED CCEEEECCEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHH ELLPEIELYIIKKPPNVHDIKIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVD HCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVSADVGILTWAQKMGIKWIDAA HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC NFREVLEGLVAKMGEGKNL CHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA