Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223267

Identifier: 212223267

GI number: 212223267

Start: 94352

End: 94852

Strand: Reverse

Name: 212223267

Synonym: TON_0121

Alternate gene names: NA

Gene position: 94852-94352 (Counterclockwise)

Preceding gene: 212223268

Following gene: 212223266

Centisome position: 5.13

GC content: 47.7

Gene sequence:

>501_bases
TTGGAGAAGAGGTGGGTCGCGACCATCCACCTCGACACGCTGAAGGTGGAGTACGATCCCACCTTTAAATTTAAGTGTGT
TGAGAACTGTGGAAAATGCTGCTACGAGCTGGAGATTCCGATTCGGGATGAAGATATAGCCCAGATAGAGGAACTCGGCT
ACAACGCATGGGAATTCGTTGATTATGAGAAGATGTTCTACCGTGGGGACAAGTTCTTAAGCTACGCCCTCAAAAAGCGT
CCCTTTGACGGAGGCTGCGTTTTTCTCGATCCAGGGACCCTGAAGTGTAAAATCTATAACCACAGGCCTCTAGCGTGCAG
ACTCTACCCTTTTGTCTTCGTGAAACATGGGAATAAAATGGAAGTCTACGTCAAGAAAGACTCCTTCTGCCCGGGTATTA
ACCATCCAGACGGAGAGCCTGTAACAAAGGAATTCCTCCTCAGAGAATATGGAGACGTCATAGAAGATTACCGCAGGAAA
GTTGTGAACACAGGCGAGTAA

Upstream 100 bases:

>100_bases
ATAGGGGAGCTTGACAGGTTCCACGACGAAATACTCAGAAGAATAAGCAACATCGAGATGACCGAGACCCTCATAGCAAG
CTCCTACAGGGGGTGAAGGC

Downstream 100 bases:

>100_bases
CCGAAACATATTTATACATTTTCTTGTTAATTTTTGGCCACCGGAGGTGAGAGAATGAGTCAGCTAAAGTCGGTTCAGGA
AAAGCTCAGGCTTGTCAGGG

Product: protein, conserved, UPF0153 family

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MEKRWVATIHLDTLKVEYDPTFKFKCVENCGKCCYELEIPIRDEDIAQIEELGYNAWEFVDYEKMFYRGDKFLSYALKKR
PFDGGCVFLDPGTLKCKIYNHRPLACRLYPFVFVKHGNKMEVYVKKDSFCPGINHPDGEPVTKEFLLREYGDVIEDYRRK
VVNTGE

Sequences:

>Translated_166_residues
MEKRWVATIHLDTLKVEYDPTFKFKCVENCGKCCYELEIPIRDEDIAQIEELGYNAWEFVDYEKMFYRGDKFLSYALKKR
PFDGGCVFLDPGTLKCKIYNHRPLACRLYPFVFVKHGNKMEVYVKKDSFCPGINHPDGEPVTKEFLLREYGDVIEDYRRK
VVNTGE
>Mature_166_residues
MEKRWVATIHLDTLKVEYDPTFKFKCVENCGKCCYELEIPIRDEDIAQIEELGYNAWEFVDYEKMFYRGDKFLSYALKKR
PFDGGCVFLDPGTLKCKIYNHRPLACRLYPFVFVKHGNKMEVYVKKDSFCPGINHPDGEPVTKEFLLREYGDVIEDYRRK
VVNTGE

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19606; Mature: 19606

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRWVATIHLDTLKVEYDPTFKFKCVENCGKCCYELEIPIRDEDIAQIEELGYNAWEFV
CCCEEEEEEEEEEEEEEECCCEEEEEHHHHCCEEEEEECCCCCCHHHHHHHCCCCCHHHC
DYEKMFYRGDKFLSYALKKRPFDGGCVFLDPGTLKCKIYNHRPLACRLYPFVFVKHGNKM
CHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEEEEEEECCEE
EVYVKKDSFCPGINHPDGEPVTKEFLLREYGDVIEDYRRKVVNTGE
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEKRWVATIHLDTLKVEYDPTFKFKCVENCGKCCYELEIPIRDEDIAQIEELGYNAWEFV
CCCEEEEEEEEEEEEEEECCCEEEEEHHHHCCEEEEEECCCCCCHHHHHHHCCCCCHHHC
DYEKMFYRGDKFLSYALKKRPFDGGCVFLDPGTLKCKIYNHRPLACRLYPFVFVKHGNKM
CHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEEEEEEECCEE
EVYVKKDSFCPGINHPDGEPVTKEFLLREYGDVIEDYRRKVVNTGE
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA