| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is xpt [H]
Identifier: 212223266
GI number: 212223266
Start: 93581
End: 94297
Strand: Reverse
Name: xpt [H]
Synonym: TON_0120
Alternate gene names: 212223266
Gene position: 94297-93581 (Counterclockwise)
Preceding gene: 212223267
Following gene: 212223265
Centisome position: 5.1
GC content: 48.81
Gene sequence:
>717_bases ATGAGTCAGCTAAAGTCGGTTCAGGAAAAGCTCAGGCTTGTCAGGGTGCTCAGACTGCTTAAGAAAAATTACACTTACGA GGAGCTCTCTAAGATAACGGGCCTCCCCATTACAGTCCTCAACAGATACGTCAGGGGAAAGGTCCTTCCGAGCACTGAAA GAACAAGAGAGCTCCTGGAGCTACTGCTCCCTTATATAAACATCGAGGAGGAAGTTAGAAGAAGGATAAAATTCGATGAG TACGGCTTTTTCGACAACATGCCAGTTCTTAGCGACACGGCATTGATGAGCCTTATAGCGGAGGACGTTGCAAGCAGATA CATGGACAAAAACGTTGACAAGGTTCTCACTGCTGCAACCGATGGAATAGCACTTGGTGTTCACATCGCGAGGGAGCTCA ACGTCGATGTTGTATATGCCAAGAAGAAGAAAGAAGTCGGCGTCGAGAAGTTCTACGAGGTCAGTTACGTCCCAAGCGCT TCGGGAAGCGTTACGACACTCTATCTGCCACAGTGGGCACTCAAAAAGGGTGAAAATGTCCTCATAGTTGATGACGTCAT TAGGAGCGGTGAGACTCAGAAGGCACTCCTAGGAATGTGCAGACAGGCAGGGGCGAAACCAGTCGGCATGTTTTTCCTCA TAAGTGTCGGGGACATCATAGATCGCCTGAAGGAGGAGTACAACATTCCAGTGGAGAGCCTCATAAGGCTGGAGTGA
Upstream 100 bases:
>100_bases CGTCATAGAAGATTACCGCAGGAAAGTTGTGAACACAGGCGAGTAACCGAAACATATTTATACATTTTCTTGTTAATTTT TGGCCACCGGAGGTGAGAGA
Downstream 100 bases:
>100_bases TCCAAATGAAGGTTTTAATCTACAACGTCGATGGCCTAACGATTCCCGTGGAGGTCGAGCCCGGCCTCCCCTTCACATTC CACTGCAGCATCGAGGAGTG
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: XPRTase [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSQLKSVQEKLRLVRVLRLLKKNYTYEELSKITGLPITVLNRYVRGKVLPSTERTRELLELLLPYINIEEEVRRRIKFDE YGFFDNMPVLSDTALMSLIAEDVASRYMDKNVDKVLTAATDGIALGVHIARELNVDVVYAKKKKEVGVEKFYEVSYVPSA SGSVTTLYLPQWALKKGENVLIVDDVIRSGETQKALLGMCRQAGAKPVGMFFLISVGDIIDRLKEEYNIPVESLIRLE
Sequences:
>Translated_238_residues MSQLKSVQEKLRLVRVLRLLKKNYTYEELSKITGLPITVLNRYVRGKVLPSTERTRELLELLLPYINIEEEVRRRIKFDE YGFFDNMPVLSDTALMSLIAEDVASRYMDKNVDKVLTAATDGIALGVHIARELNVDVVYAKKKKEVGVEKFYEVSYVPSA SGSVTTLYLPQWALKKGENVLIVDDVIRSGETQKALLGMCRQAGAKPVGMFFLISVGDIIDRLKEEYNIPVESLIRLE >Mature_237_residues SQLKSVQEKLRLVRVLRLLKKNYTYEELSKITGLPITVLNRYVRGKVLPSTERTRELLELLLPYINIEEEVRRRIKFDEY GFFDNMPVLSDTALMSLIAEDVASRYMDKNVDKVLTAATDGIALGVHIARELNVDVVYAKKKKEVGVEKFYEVSYVPSAS GSVTTLYLPQWALKKGENVLIVDDVIRSGETQKALLGMCRQAGAKPVGMFFLISVGDIIDRLKEEYNIPVESLIRLE
Specific function: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. Xpt subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR010079 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 27047; Mature: 26916
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLKSVQEKLRLVRVLRLLKKNYTYEELSKITGLPITVLNRYVRGKVLPSTERTRELLE CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHH LLLPYINIEEEVRRRIKFDEYGFFDNMPVLSDTALMSLIAEDVASRYMDKNVDKVLTAAT HHHHHCCCHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC DGIALGVHIARELNVDVVYAKKKKEVGVEKFYEVSYVPSASGSVTTLYLPQWALKKGENV CCHHHHHHHHHHCCEEEEEECCHHHCCHHHHHHEEECCCCCCCEEEEECCHHHHHCCCCE LIVDDVIRSGETQKALLGMCRQAGAKPVGMFFLISVGDIIDRLKEEYNIPVESLIRLE EEEHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure SQLKSVQEKLRLVRVLRLLKKNYTYEELSKITGLPITVLNRYVRGKVLPSTERTRELLE CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHH LLLPYINIEEEVRRRIKFDEYGFFDNMPVLSDTALMSLIAEDVASRYMDKNVDKVLTAAT HHHHHCCCHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC DGIALGVHIARELNVDVVYAKKKKEVGVEKFYEVSYVPSASGSVTTLYLPQWALKKGENV CCHHHHHHHHHHCCEEEEEECCHHHCCHHHHHHEEECCCCCCCEEEEECCHHHHHCCCCE LIVDDVIRSGETQKALLGMCRQAGAKPVGMFFLISVGDIIDRLKEEYNIPVESLIRLE EEEHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA