Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223155

Identifier: 212223155

GI number: 212223155

Start: 13936

End: 14226

Strand: Reverse

Name: 212223155

Synonym: TON_0011

Alternate gene names: NA

Gene position: 14226-13936 (Counterclockwise)

Preceding gene: 212223156

Following gene: 212223154

Centisome position: 0.77

GC content: 54.64

Gene sequence:

>291_bases
ATGAAATACCGCGACTTCTTGACTCTACACGTTCTCCACCACGCAGAAAGGGAGCCAATAACCGGTTCTTTCATGATGGA
AGAGCTCAAAAGACATGGCTATCACATCAGCCCGGGCACGATATACCCCCTTCTGCACGGCATGGAGGAAAGCGGGCTCC
TAAAGAGCCACTGGGAAGTGCGGGACGGAAGGCGCGTCAGGGTCTACGAGATAACTCCGAAGGGAAAGAAAGCCCTCGAA
GAGGGCAGGGAACGAGTTAGGGAGCTGTGCAGAGAACTCCTGGAGGAGTGA

Upstream 100 bases:

>100_bases
CTTTGAGGGAACCTTCCACTGCTACGTCCTTGAGAAGCACGTCCTCGAGTGACAAAAATTTTTTAAATCTCAATATCGGA
TTTCGATATCGGTGTTCGAT

Downstream 100 bases:

>100_bases
AATATGGGGGAGAAGGAAAAGAAAATCTTCGGCGTTAGCCGGAACGTCTTCCTGCTCGGGATCGTCAGCTTCCTCAACGA
CATGAGCAGTGAGATGATAG

Product: protein

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR Family; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator PadR-Type; ParR Family Transcriptional Regulator; Transcriptional Regulator Padr Family; Transcription Regulator PadR-Like Family

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEVRDGRRVRVYEITPKGKKALE
EGRERVRELCRELLEE

Sequences:

>Translated_96_residues
MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEVRDGRRVRVYEITPKGKKALE
EGRERVRELCRELLEE
>Mature_96_residues
MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEVRDGRRVRVYEITPKGKKALE
EGRERVRELCRELLEE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11439; Mature: 11439

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEV
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHCCCCC
RDGRRVRVYEITPKGKKALEEGRERVRELCRELLEE
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEV
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHCCCCC
RDGRRVRVYEITPKGKKALEEGRERVRELCRELLEE
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA