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The map label for this gene is yajR [C]

Identifier: 212223154

GI number: 212223154

Start: 12754

End: 13932

Strand: Reverse

Name: yajR [C]

Synonym: TON_0010

Alternate gene names: 212223154

Gene position: 13932-12754 (Counterclockwise)

Preceding gene: 212223155

Following gene: 212223148

Centisome position: 0.75

GC content: 53.77

Gene sequence:

>1179_bases
ATGGGGGAGAAGGAAAAGAAAATCTTCGGCGTTAGCCGGAACGTCTTCCTGCTCGGGATCGTCAGCTTCCTCAACGACAT
GAGCAGTGAGATGATAGCACCGGTAGTACCAACTTATCTGACTGAAATCCTGGGAATTAGCAAGGTCGTGAGCGGCTCGA
TAATGGGCCTCATCGAAAGCCTGAGCTCGCTGTTTAAAGTACTTTTCGGCTACTTCAGCGACCACTTTAGAAAAAGGAAG
CTCTTCGTGGCCTTCGGCTACCTGTTCTCCACCATCGCCAAGGGGGCCCTTGCATTCGTCCACTCGTGGTGGGACTTTGT
AACCCTAAGGGTTCTCGACAGGGTAGGCAAAGGAATAAGAACCGCACCAAGAGACGCGCTCATTGCCGAATCCAGTGAGA
AGGGGAAGACAGGCAAGTCCTTTGGCTTTCACAGAATGATGGATACGCTTGGAGCTGTTGCCGGACCGCTGGCGGCGATA
GCGATTCTGGAGCTGCTCAAAAGCCTGCCCCTAGAAACCGCCTACCGCTATCTCTTCCTGCTCTCGGCTATTCCAGGCTT
AATCGGAGTCGTTATCGTCATACTGCTGGTCAAAGACAAAGGCGGCGAGGTAAAGAAGAAGGTAAAGGGCATCTCGGCAC
TCAAATCCAGAAACCTGCGCCTCTTCCTCGTCGTGGTTGCCATCGGCGCCCTCGGCAGGTACAGCTATGCCTTCACACTC
TGGAAGGCAGAGGAGCTCGGCTTCTCAGTCGTTCAGGGACTGGGCTTTTACGCGCTCTTCAACCTAATCTACGCTCTCTC
AGCCTATCCCCTCGGAACCTACTCGGACACCTTCGGAAAGAAGAGGATGATAGCCCTCGGTTTCGGAATAGCGGCCCTGG
CATCGCTGGCCTTCGCATACGCGAGGGACTTCTACACACTCATAGCAGCCTTCGTGCTCTATGGCCTCTACATAGCCATC
GAGGACACCATACCGAGAGCCTACATGGCTGACTTAGCGGAGGAATTCGAGAAGGGGACAATCATAGGCGCATACCACAC
TGTCTTTGGTGTCTTTGTCTTTCCAGCCTCGGTGATAGCAGGCTGGCTGTGGCAGAACTATTCACTGACCTACTCGTTCA
TCTTCGCGGCGCTGATGAACGCGATAGCTATGGTTCTGATGGCGTTTGTGAGGGAGTAG

Upstream 100 bases:

>100_bases
CGTCAGGGTCTACGAGATAACTCCGAAGGGAAAGAAAGCCCTCGAAGAGGGCAGGGAACGAGTTAGGGAGCTGTGCAGAG
AACTCCTGGAGGAGTGAAAT

Downstream 100 bases:

>100_bases
CCTCGTTTCATTTTTACCTTGCAGAAAAGCCGGGAGAAGAGAAGAACAGCAAAATCAAGCCCCAAGCTTCTCGAGCTCTT
CCTTTCCTATGAGAAGCGGC

Product: Permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MGEKEKKIFGVSRNVFLLGIVSFLNDMSSEMIAPVVPTYLTEILGISKVVSGSIMGLIESLSSLFKVLFGYFSDHFRKRK
LFVAFGYLFSTIAKGALAFVHSWWDFVTLRVLDRVGKGIRTAPRDALIAESSEKGKTGKSFGFHRMMDTLGAVAGPLAAI
AILELLKSLPLETAYRYLFLLSAIPGLIGVVIVILLVKDKGGEVKKKVKGISALKSRNLRLFLVVVAIGALGRYSYAFTL
WKAEELGFSVVQGLGFYALFNLIYALSAYPLGTYSDTFGKKRMIALGFGIAALASLAFAYARDFYTLIAAFVLYGLYIAI
EDTIPRAYMADLAEEFEKGTIIGAYHTVFGVFVFPASVIAGWLWQNYSLTYSFIFAALMNAIAMVLMAFVRE

Sequences:

>Translated_392_residues
MGEKEKKIFGVSRNVFLLGIVSFLNDMSSEMIAPVVPTYLTEILGISKVVSGSIMGLIESLSSLFKVLFGYFSDHFRKRK
LFVAFGYLFSTIAKGALAFVHSWWDFVTLRVLDRVGKGIRTAPRDALIAESSEKGKTGKSFGFHRMMDTLGAVAGPLAAI
AILELLKSLPLETAYRYLFLLSAIPGLIGVVIVILLVKDKGGEVKKKVKGISALKSRNLRLFLVVVAIGALGRYSYAFTL
WKAEELGFSVVQGLGFYALFNLIYALSAYPLGTYSDTFGKKRMIALGFGIAALASLAFAYARDFYTLIAAFVLYGLYIAI
EDTIPRAYMADLAEEFEKGTIIGAYHTVFGVFVFPASVIAGWLWQNYSLTYSFIFAALMNAIAMVLMAFVRE
>Mature_391_residues
GEKEKKIFGVSRNVFLLGIVSFLNDMSSEMIAPVVPTYLTEILGISKVVSGSIMGLIESLSSLFKVLFGYFSDHFRKRKL
FVAFGYLFSTIAKGALAFVHSWWDFVTLRVLDRVGKGIRTAPRDALIAESSEKGKTGKSFGFHRMMDTLGAVAGPLAAIA
ILELLKSLPLETAYRYLFLLSAIPGLIGVVIVILLVKDKGGEVKKKVKGISALKSRNLRLFLVVVAIGALGRYSYAFTLW
KAEELGFSVVQGLGFYALFNLIYALSAYPLGTYSDTFGKKRMIALGFGIAALASLAFAYARDFYTLIAAFVLYGLYIAIE
DTIPRAYMADLAEEFEKGTIIGAYHTVFGVFVFPASVIAGWLWQNYSLTYSFIFAALMNAIAMVLMAFVRE

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43121; Mature: 42989

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GEKEKKIFGVSRNVFLLGIVSFLNDMSSEMIAPVVPTYLTEILGISKVVSGSIMGLIES
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]