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The map label for this gene is rpoC

Identifier: 209558664

GI number:

Start: 98048

End: 101662

Strand: Direct

Name: rpoC

Synonym: Spy49_0088

Alternate gene names: NA

Gene position: NA

Preceding gene: 209558663

Following gene: 209558665

Centisome position: NA

GC content: NA

Gene sequence:

>3615_bases
ATGCAAATCACATTAGCCTCACCAAGTAAGGTCCGTTCATGGTCTTATGGTGAAGTTAAAAAACCTGAAACAATCAACTA
CCGTACATTAAAACCAGAACGTGAAGGACTCTTTGACGAAGTCATCTTTGGTCCAACAAAAGACTGGGAATGTGCGTGTG
GTAAGTACAAACGTATCCGTTATAAAGGGATCGTTTGTGACCGCTGTGGGGTTGAGGTAACTCGTGCTAAAGTACGTCGT
GAACGTATGGGTCACATTGAGTTAAAAGCTCCTGTATCACATATCTGGTATTTCAAAGGGATTCCATCTCGTATGGGATT
GACTCTTGATATGAGTCCTCGTGCCCTTGAAGAAGTGATCTATTTTGCGGCTTATGTGGTCATTGATCCAAAAGATACAC
CGCTTGAACCAAAATCATTATTAACAGAACGTGAATACCGTGAAAAACTACAAGAGTATGGTCATGGGTCATTTGTCGCT
AAGATGGGTGCTGAAGCCATTCAAGATCTCTTGAAACGTGTGGACTTGGCAGCTGAAATCGCTGAATTAAAAGAAGAGTT
GAAATCTGCTTCTGGTCAAAAACGGATTAAAGCAGTTCGTCGTTTAGACGTCCTTGATGCCTTTAACAAATCTGGAAATA
AACCAGAATGGATGGTTCTTAACATCCTGCCGGTTATTCCACCAGATCTTCGTCCGATGGTTCAATTGGATGGTGGCCGT
TTTGCGGCATCAGACTTGAATGACTTGTACCGTCGTGTGATTAACCGTAACAACCGTTTGGCACGTTTGTTAGAACTTAA
TGCCCCTGGCATCATTGTTCAAAATGAAAAACGAATGCTTCAAGAAGCCGTTGATGCTTTGATTGATAATGGTCGTCGTG
GTCGTCCAATCACTGGACCAGGAAGTCGTCCATTGAAATCATTGAGCCACATGCTTAAAGGTAAACAAGGGCGTTTCCGT
CAAAACTTGCTTGGTAAACGTGTAGACTTCTCTGGACGTTCCGTTATCGCTGTTGGTCCAACCCTTAAAATGTATCAATG
TGGTGTCCCACGTGAAATGGCTATCGAGCTTTTTAAACCATTTGTAATGCGCGAAATTGTTGCCAAAGAATATGCTGGTA
ACGTTAAAGCCGCTAAACGTATGGTTGAACGTGGCGACGAACGCATCTGGGATATCTTAGAAGAAGTTATCAAAGAACAC
CCAGTCCTACTTAACCGCGCACCGACCCTTCACAGACTTGGTATTCAGGCTTTTGAACCGGTTCTTATTGACGGTAAGGC
ACTTCGTCTTCACCCACTTGTGTGTGAGGCCTACAATGCCGACTTCGATGGAGACCAAATGGCCATCCACGTGCCACTTT
CAGAAGAAGCACAAGCTGAAGCTCGTCTTTTGATGCTTGCTGCAGAGCACATCTTGAACCCTAAAGATGGTAAACCAGTT
GTTACTCCATCTCAGGATATGGTTCTTGGTAACTACTATCTTACGATGGAAGATGCTGGTCGCGAAGGCGAAGGTATGAT
TTTCAAGGATAAAGACGAAGCTGTGATGGCATATCGTAATGGTTATGCTCATCTTCATAGTCGTGTGGGTATCGCTGTTG
ACAGCATGCCAAACAAACCTTGGAAAGACAATCAAAGACATAAAATCATGGTGACAACTGTTGGTAAGATTCTCTTTAAC
GATATCATGCCAGAGGACCTTCCTTACCTCCAAGAGCCAAACAATGCCAACTTGACAGAAGGAACACCTGATAAATACTT
CCTTGAACCTGGTCAAGACATCCAAGAAGTGATTGATCGCTTAGACATCAATGTGCCATTTAAGAAGAAAAACCTCGGTA
ACATCATTGCGGAAACCTTCAAACGTTTCCGTACAACAGAAACATCAGCCTTCCTTGACCGCTTGAAAGACCTTGGTTAC
TACCATTCAACCCTTGCTGGTTTGACAGTGGGTATCGCTGACATTCCTGTTATTGATAATAAAGCTGAAATCATTGATGC
TGCTCACCATCGTGTTGAAGAAATTAACAAAGCCTTCCGTCGTGGTTTGATGACAGATGATGACCGTTATGTTGCCGTTA
CAACAACATGGCGTGAAGCTAAAGAAGCCCTTGAAAAACGTCTGATTGAAACACAAGATCCTAAGAACCCAATCGTTATG
ATGATGGACTCAGGAGCTCGTGGTAACATCTCAAACTTCTCACAGCTTGCCGGTATGCGTGGTTTGATGGCTGCTCCTAA
CGGACGCATCATGGAACTTCCTATCTTATCAAACTTCCGTGAAGGTTTGAGCGTTTTGGAAATGTTCTTCTCAACCCACG
GTGCACGTAAAGGGATGACCGATACGGCCCTTAAAACAGCCGACTCAGGTTACCTTACTCGTCGTTTGGTTGACGTTGCC
CAAGATGTTATCATTCGTGAGGACGATTGTGGCACTGATCGTGGTCTTCTTATCCGTGCTATTACAGATGGTAAAGAAGT
TACCGAAACGCTTGAAGAGCGTCTTCAAGGTCGTTACACACGTAAATCAGTCAAACACCCTGAAACTGGTGAAGTCTTGA
TTGGTGCTGACCAATTAATCACTGAAGACATGGCTCGTAAGATTGTTGATGCAGGTGTTGAAGAAGTGACCATTCGTTCT
GTCTTTACCTGTGCGACTCGTCATGGAGTTTGCCGTCACTGTTATGGTATCAACTTGGCAACTGGTGATGCTGTTGAAGT
GGGTGAAGCAGTTGGTACTATTGCTGCCCAATCTATCGGTGAGCCTGGTACTCAGCTTACCATGCGTACCTTCCACACGG
GTGGTGTAGCCTCAAATACCGATATCACACAGGGTCTTCCTCGTATTCAAGAGATCTTTGAAGCACGTAATCCTAAAGGG
GAAGCGGTCATTACTGAAGTGAAAGGGAATGTCGTCGAGATTGAAGAAGATGCGTCAACTCGTACCAAGAAAGTCTACGT
TCAAGGTAAAACTGGCATGGGCGAATATGTCGTACCATTTACAGCACGTATGAAAGTTGAAGTTGGCGACGAAGTTAATC
GCGGAGCTGCCCTTACAGAAGGGTCAATCCAACCAAAACGTCTCCTTGAAGTGCGTGATACCTTGTCAGTTGAAACGTAC
CTTCTTGCAGAAGTACAAAAAGTTTACCGTAGCCAAGGGGTAGAAATCGGAGACAAACACGTTGAGGTAATGGTTCGCCA
AATGCTTCGTAAAGTTCGTGTCATGGATCCAGGTGATACAGACCTCCTTCCAGGTACACTTATGGATATTTCTGATTTCA
CAGATGCTAACAAAGATATTGTTATCTCTGGTGGTATCCCTGCGACATCTCGTCCAGTTCTTATGGGTATTACTAAGGCT
TCCCTTGAAACCAATTCCTTCTTATCAGCTGCATCCTTCCAAGAAACAACTCGTGTTCTTACAGATGCTGCTATCCGTGG
TAAGAAAGACCACTTACTTGGTCTTAAAGAAAATGTTATCATTGGTAAAATCATCCCAGCTGGTACTGGTATGGCTCGTT
ACCGTAACATTGAACCACAAGCGATGAATGAGATTGAAGTGATTGATCATACAGAAGTCTCAGCAGAAGCCGTTTTTACA
GCAGAAGCAGAATAA

Upstream 100 bases:

>100_bases
AATAATTATTTACTGGTCTGGGGCAAAGGCCCCAGGAACTGGTAAAGTCATCAAAGGCAGAAAGGTAAAACTAGTGGTTG
ACGTAAATCGTTTTAAAAGT

Downstream 100 bases:

>100_bases
TCTCATGAAAGAGTCCTTAGGGGCTCTTTTTTGTCTGAGTTTGTTGGCAGTAAAAAGCATTGACAATCAGTCTGAGTCCC
AATGAGCAGATGTTTTTCAA

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1204_residues
MQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWECACGKYKRIRYKGIVCDRCGVEVTRAKVRR
ERMGHIELKAPVSHIWYFKGIPSRMGLTLDMSPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGHGSFVA
KMGAEAIQDLLKRVDLAAEIAELKEELKSASGQKRIKAVRRLDVLDAFNKSGNKPEWMVLNILPVIPPDLRPMVQLDGGR
FAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGPGSRPLKSLSHMLKGKQGRFR
QNLLGKRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKPFVMREIVAKEYAGNVKAAKRMVERGDERIWDILEEVIKEH
PVLLNRAPTLHRLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHILNPKDGKPV
VTPSQDMVLGNYYLTMEDAGREGEGMIFKDKDEAVMAYRNGYAHLHSRVGIAVDSMPNKPWKDNQRHKIMVTTVGKILFN
DIMPEDLPYLQEPNNANLTEGTPDKYFLEPGQDIQEVIDRLDINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGY
YHSTLAGLTVGIADIPVIDNKAEIIDAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIETQDPKNPIVM
MMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMTDTALKTADSGYLTRRLVDVA
QDVIIREDDCGTDRGLLIRAITDGKEVTETLEERLQGRYTRKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRS
VFTCATRHGVCRHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQEIFEARNPKG
EAVITEVKGNVVEIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVEVGDEVNRGAALTEGSIQPKRLLEVRDTLSVETY
LLAEVQKVYRSQGVEIGDKHVEVMVRQMLRKVRVMDPGDTDLLPGTLMDISDFTDANKDIVISGGIPATSRPVLMGITKA
SLETNSFLSAASFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAMNEIEVIDHTEVSAEAVFT
AEAE

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA