Click here to switch to the map view.

The map label for this gene is rpoB

Identifier: 209558663

GI number:

Start: 94364

End: 97930

Strand: Direct

Name: rpoB

Synonym: Spy49_0087

Alternate gene names: NA

Gene position: NA

Preceding gene: 209558662

Following gene: 209558664

Centisome position: NA

GC content: NA

Gene sequence:

>3567_bases
TTGGCAGGACATGAAGTTCGATACGGAAAACACCGTACACGTCGTAGCTTTTCAAGAATCAAAGAAGTTCTTGATTTACC
AAATTTGATTGAAATTCAAACTGACTCATTCCAAGATTTCCTCGATTCAGGTTTGAAAGAAGTATTTGAAGATGTACTTC
CTATTTCAAACTTTACGGATACTATGGAACTTGAATTTGTTGGTTACGAATTTAAAGAACCTAAATATACCCTTGAAGAA
GCTCGTATCCACGATGCAAGTTATTCTGCACCAATCTTTGTTACCTTCCGTTTGGTCAATAAAGAAACTGGTGAGATTAA
AACTCAAGAAGTCTTCTTTGGTGATTTCCCAATCATGACGGAAATGGGTACCTTTATTATCAATGGTGGTGAACGTATCA
TCGTTTCTCAGTTGGTGCGTTCTCCAGGTGTTTATTTCAACGATAAAGTTGATAAAAACGGTAAAGTTGGTTACGGATCA
ACAGTGATTCCTAACCGTGGGGCTTGGTTGGAATTAGAGACTGACTCAAAAGACATTGCCTACACTCGTATTGACCGTAC
CCGTAAGATTCCATTCACAACCTTGGTTCGTGCCCTTGGTTTCTCAGGTGATGATGAAATTGTTGATATCTTTGGTGAAA
GCGACCTTGTTCGTAATACCATTGAAAAAGACATTCACAAAAATCCAAGTGATTCTCGTACAGACGAAGCCCTTAAAGAA
ATTTACGAGCGTCTTCGTCCAGGTGAGCCAAAAACTGCAGATAGCTCTCGTAGTCTTTTGATTGCGCGTTTCTTTGATGC
ACGTCGTTACGATTTGGCTGCGGTTGGTCGTTACAAAGTGAACAAAAAACTTAATATCAAGACTCGTCTTTTGAACCAAA
TCATTGCTGAAAACCTTGTGGATGCTGAAACTGGCGAAATTTTGGTAGAAGCTGGAACTGAGATGACTCGTAGCGTCATC
GAATCCATCGAAGAACACCTTGACGGTGATTTGAACAAGTTTGTTTACACACCAAATGATTACGCTGTTGTTACTGAACC
AGTTGTTCTTCAAAAATTCAAGGTTGTGTCACCAATTGATCCTGACCGCGTGGTAACTATTGTTGGTAATGCCAATCCAG
ATGACAAGGTACGTGCTTTGACACCTGCTGATATTTTGGCAGAAATGTCTTACTTCTTGAACCTTGCTGAAGGTCTTGGA
AAAGTTGACGATATTGACCACTTGGGTAACCGTCGTATCCGTGCCGTTGGTGAATTGCTTGCCAACCAATTCCGCATCGG
TCTTGCTCGTATGGAGCGTAACGTTCGTGAGCGTATGTCTGTTCAAGACAACGATGTGTTAACACCACAACAAATCATCA
ATATCCGTCCTGTCACAGCAGCTGTCAAAGAATTCTTCGGTTCGTCTCAGTTGTCACAGTTCATGGACCAACACAACCCA
TTGTCAGAGTTGTCTCACAAACGTCGTTTATCTGCCTTAGGACCTGGTGGTTTGACACGTGACCGTGCTGGTTATGAGGT
TCGTGACGTGCATTACACGCACTATGGCCGTATGTGTCCGATTGAAACACCTGAAGGACCAAACATTGGATTGATTAACA
ACTTGTCTTCATTTGGACATCTTAATAAATATGGTTTCATCCAAACACCTTACCGTAAGGTTGACCGTGCGACTGGTAGG
GTAACTAACGAAATTGTTTGGTTGACTGCCGACGAAGAAGACGAATACACAGTTGCACAGGCCAATTCGAAACTAAACGA
AGATGGCACTTTTGCTGAAGAAATCGTTATGGGTCGTCATCAAGGTAATAACCAAGAATTTTCTGCAAGTGTTGTTGATT
TCGTTGACGTTTCCCCTAAACAGGTAGTTGCTGTTGCGACGGCATGTATTCCTTTCTTGGAAAACGATGACTCCAACCGT
GCCCTCATGGGTGCCAACATGCAACGTCAGGCTGTGCCATTGATTGATCCAAAAGCACCATATGTTGGTACTGGTATGGA
ATATCAAGCTGCCCATGACTCAGGCGCTGCGGTGATTGCTCAGCACAATGGTAAAGTTGTCTTTTCTGATGCTGAAAAAG
TGGAAATCCGTCGTCAAGATGGCTCACTTGATGTTTACCACATTACCAAATTCCGTCGTTCAAACTCAGGAACAGCCTAT
AACCAACGCACCCTTGTTAAAGTAGGAGACATCGTTGAAAAAGGTGACTTCATCGCTGATGGACCATCTATGGAAAACGG
TGAAATGGCTCTTGGACAAAACCCAGTCGTTGCTTACATGACTTGGGAAGGTTACAACTTCGAGGACGCTGTTATCATGT
CTGAACGCCTTGTGAAAGAGGATGTTTACACATCTGTTCACTTGGAAGAATTCGAATCTGAAACGCGTGATACAAAACTT
GGCCCTGAAGAAATCACTCGGGAAATCCCAAATGTTGGTGAAGAAGCCCTCAAAGACCTTGACGAAATGGGCATTATCCG
TATCGGTGCTGAGGTGAAAGAAGGCGACATCTTAGTAGGTAAAGTCACACCTAAAGGTGAAAAAGACCTTTCTGCTGAAG
AACGTTTACTTCACGCCATCTTTGGGGATAAATCGCGTGAAGTGCGTGATACCTCACTTCGTGTCCCTCACGGTGGTGAT
GGTATCGTTCGTGATGTGAAAATCTTTACACGCGCTAACGGCGATGAATTGCAATCAGGTGTTAATATGCTTGTGCGTGT
TTACATCGCTCAAAAACGTAAAATCAAGGTCGGAGATAAAATGGCCGGTCGTCACGGAAACAAGGGTGTCGTTTCACGTA
TTGTACCAGTTGAAGACATGCCATACCTTCCAGACGGAACACCAGTTGACATCATGTTGAACCCTCTTGGGGTGCCATCA
CGGATGAATATTGGTCAGGTTATGGAACTTCACCTTGGTATGGCTGCTCGTAATCTTGGCATTCACATTGCAACACCTGT
CTTTGACGGGGCTTCATCAGAAGACCTTTGGGACACTGTTCGCGAAGCTGGTATGGATAGCGATGCTAAGACGGTCCTTT
ATGATGGTCGCACCGGTGAACCATTTGACAACCGTGTATCCGTTGGTGTCATGTATATGATCAAACTTCACCACATGGTT
GATGATAAACTTCATGCCCGTTCTGTAGGACCATACTCACTTGTTACCCAACAGCCACTTGGTGGTAAAGCTCAATTTGG
TGGACAACGTTTTGGTGAGATGGAGGTTTGGGCCCTTGAAGCTTATGGTGCATCAAATGTTCTTCAAGAAATCTTGACCT
ACAAGTCAGATGACGTCACAGGACGTTTGAAAGCCTATGAAGCGATTACTAAAGGTAAACCAATTCCAAAACCAGGTGTA
CCAGAATCCTTCCGTGTTCTTGTAAAAGAATTGCAATCGCTTGGTCTTGATATGCGTGTGCTTGACGAGGATGATAATGA
AGTGGAACTTCGTGATCTTGATGAAGGTGAAGACGATGACATTATGCATGTTGACGATCTCGAGAAGGCACGTGAAAAAC
AAGCTCAAGAAACCCAAGAAGTTTCTGAAACAACTGACGAAAAATAA

Upstream 100 bases:

>100_bases
CTATATTTAAATATTCTAAAAATTAACATTTAGGGCAAATGATAACTTAGTTGCGATTTGCTGAAACAGCAAAGCTTAAA
TAGAAGAAGGAGCTAAAAAC

Downstream 100 bases:

>100_bases
GCAATCAATTCTTATTAAATAATTATTTACTGGTCTGGGGCAAAGGCCCCAGGAACTGGTAAAGTCATCAAAGGCAGAAA
GGTAAAACTAGTGGTTGACG

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1188_residues
MAGHEVRYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDSGLKEVFEDVLPISNFTDTMELEFVGYEFKEPKYTLEE
ARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMTEMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGS
TVIPNRGAWLELETDSKDIAYTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGESDLVRNTIEKDIHKNPSDSRTDEALKE
IYERLRPGEPKTADSSRSLLIARFFDARRYDLAAVGRYKVNKKLNIKTRLLNQIIAENLVDAETGEILVEAGTEMTRSVI
ESIEEHLDGDLNKFVYTPNDYAVVTEPVVLQKFKVVSPIDPDRVVTIVGNANPDDKVRALTPADILAEMSYFLNLAEGLG
KVDDIDHLGNRRIRAVGELLANQFRIGLARMERNVRERMSVQDNDVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGHLNKYGFIQTPYRKVDRATGR
VTNEIVWLTADEEDEYTVAQANSKLNEDGTFAEEIVMGRHQGNNQEFSASVVDFVDVSPKQVVAVATACIPFLENDDSNR
ALMGANMQRQAVPLIDPKAPYVGTGMEYQAAHDSGAAVIAQHNGKVVFSDAEKVEIRRQDGSLDVYHITKFRRSNSGTAY
NQRTLVKVGDIVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKEDVYTSVHLEEFESETRDTKL
GPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVGKVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGD
GIVRDVKIFTRANGDELQSGVNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWDTVREAGMDSDAKTVLYDGRTGEPFDNRVSVGVMYMIKLHHMV
DDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGV
PESFRVLVKELQSLGLDMRVLDEDDNEVELRDLDEGEDDDIMHVDDLEKAREKQAQETQEVSETTDEK

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA