| Definition | Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome. |
|---|---|
| Accession | NC_011374 |
| Length | 874,478 |
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The map label for this gene is cbiO [H]
Identifier: 209554224
GI number: 209554224
Start: 750457
End: 751758
Strand: Reverse
Name: cbiO [H]
Synonym: UUR10_0630
Alternate gene names: 209554224
Gene position: 751758-750457 (Counterclockwise)
Preceding gene: 209554495
Following gene: 209554345
Centisome position: 85.97
GC content: 28.03
Gene sequence:
>1302_bases ATGCAAAAATTAATGGATACTTTTTTCAAAAAAAAGCTTAAGGTTCCGCGTCCAATATCTGATGACATTAGTGTTCGTGT TAAGAATTTATATGCCATTTATGATGAAAAGCAAGAAAACGAATTAGTTGCTTTAAATAATATTTCATATGATTTTAAAA AAAATAAAATCTATTTCATTATTGGTAATTCAGGGTCTGGTAAATCTACATTGGTTACTCACTTTAACGGATTAATAATT TCACGTTATGGTTTTGTTCAAGTTGGTGATATTGTCTCTGGTGATCATTATGATCTCGAACACCAATTATTAGGGGTTAT TGATTCATATGATAAAAAGATCATTAATTTATTATGAAAAAACCAATTAGATCAATGAACTTTTTTAGTTTTATATTCTA ATGAAGTAAATGTGCAACAAGCACGAATTTTATTTGAAGCGAATTTTAAACAAAAACCAGTTAGTTTAAAATTTATTAAA ACAAAAAATAATCATGAATTAATAACTAATCCTTATGTAAGAGAAAATACTAAAATTGCTGTTGTTCGTGTTGACAAAAA TGTTTTTTTAGAAATTAATGATAAGATGGATTATGATGAACTTCAACGTTTTGAGTTTATTAAAAAAGAAATTAAAACTA ACTATCATTTATCTAAAAAACTAAAACGTTTTAAAGAATTGCGAAGACGAGTAGGGTTTGTTTTTCAATTTCCTGAGTAT CAATTATTTAAAGATACAATTGAAAAAGATATTATGTTTGGTCCAATTAACTTAGGTGTTAAAAAAAGTGAGGCTAAAAA ACGTGCTAAGTTTTATTTAAATAAGTTAGGCTTAGGTGATGATTATTTAGAACGTTCACCATTTGGACTATCTGGTGGTC AAAAACGACGGGTAGCAATTGCTGGAATCTTAGCAATTGAAAATGATATTTTAGTTTTTGATGAGCCAACTGCTGGTTTA GACCCTGCTGGTGAGCATGAAATGATGCAAATTATTTTAGATGCTAAAGCAAATAATAAAACGATTTTTGTGATTACTCA TACTATGGAACATGTACTTGAAGTTGCTGATGAAGTGGTTGTAATGGATGAAGGCGAAATCATTAAAACAGGTACACCTT ATGAAATCTTTTTTGATGAACACATTATTAATTCAACTTCAATTCAAGTTCCTCGTGTTATTGCAGTAATCAATGAATTA ATTAAAAAAGATTCTAAATATGAAGTTTTAAAACAAAAGCAACCACGCACAATTGAAGAGTTGGCTGATGCTATTGTTGA GTTTAAAAAGGGAGGTAAATAA
Upstream 100 bases:
>100_bases AATTAGACATTCCATTTACACTACGATTGGCAAAAACACTAAAAGATAAAGGATTAAAAATCGATTTAACTTTAAACAAC GAGGAGTTAATTGAAAAAAT
Downstream 100 bases:
>100_bases ATGAGTGCTAATGCTTATGTATTCCGGCGTTCGCCAATTCATCGTTTAAATCCAGCGATTAAATTTATCTCTTTTATTTT ATTAATTGCTATGATCTTTT
Product: cobalt transporter ATP-binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MQKLMDTFFKKKLKVPRPISDDISVRVKNLYAIYDEKQENELVALNNISYDFKKNKIYFIIGNSGSGKSTLVTHFNGLII SRYGFVQVGDIVSGDHYDLEHQLLGVIDSYDKKIINLLWKNQLDQWTFLVLYSNEVNVQQARILFEANFKQKPVSLKFIK TKNNHELITNPYVRENTKIAVVRVDKNVFLEINDKMDYDELQRFEFIKKEIKTNYHLSKKLKRFKELRRRVGFVFQFPEY QLFKDTIEKDIMFGPINLGVKKSEAKKRAKFYLNKLGLGDDYLERSPFGLSGGQKRRVAIAGILAIENDILVFDEPTAGL DPAGEHEMMQIILDAKANNKTIFVITHTMEHVLEVADEVVVMDEGEIIKTGTPYEIFFDEHIINSTSIQVPRVIAVINEL IKKDSKYEVLKQKQPRTIEELADAIVEFKKGGK
Sequences:
>Translated_433_residues MQKLMDTFFKKKLKVPRPISDDISVRVKNLYAIYDEKQENELVALNNISYDFKKNKIYFIIGNSGSGKSTLVTHFNGLII SRYGFVQVGDIVSGDHYDLEHQLLGVIDSYDKKIINLL*KNQLDQ*TFLVLYSNEVNVQQARILFEANFKQKPVSLKFIK TKNNHELITNPYVRENTKIAVVRVDKNVFLEINDKMDYDELQRFEFIKKEIKTNYHLSKKLKRFKELRRRVGFVFQFPEY QLFKDTIEKDIMFGPINLGVKKSEAKKRAKFYLNKLGLGDDYLERSPFGLSGGQKRRVAIAGILAIENDILVFDEPTAGL DPAGEHEMMQIILDAKANNKTIFVITHTMEHVLEVADEVVVMDEGEIIKTGTPYEIFFDEHIINSTSIQVPRVIAVINEL IKKDSKYEVLKQKQPRTIEELADAIVEFKKGGK >Mature_433_residues MQKLMDTFFKKKLKVPRPISDDISVRVKNLYAIYDEKQENELVALNNISYDFKKNKIYFIIGNSGSGKSTLVTHFNGLII SRYGFVQVGDIVSGDHYDLEHQLLGVIDSYDKKIINLL*KNQLDQ*TFLVLYSNEVNVQQARILFEANFKQKPVSLKFIK TKNNHELITNPYVRENTKIAVVRVDKNVFLEINDKMDYDELQRFEFIKKEIKTNYHLSKKLKRFKELRRRVGFVFQFPEY QLFKDTIEKDIMFGPINLGVKKSEAKKRAKFYLNKLGLGDDYLERSPFGLSGGQKRRVAIAGILAIENDILVFDEPTAGL DPAGEHEMMQIILDAKANNKTIFVITHTMEHVLEVADEVVVMDEGEIIKTGTPYEIFFDEHIINSTSIQVPRVIAVINEL IKKDSKYEVLKQKQPRTIEELADAIVEFKKGGK
Specific function: Part of the ABC transporter complex CbiONQ involved in cobalt import. Responsible for energy coupling to the transport system [H]
COG id: COG1122
COG function: function code P; ABC-type cobalt transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42490749, Length=173, Percent_Identity=32.3699421965318, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI9961252, Length=161, Percent_Identity=35.4037267080745, Blast_Score=65, Evalue=1e-10, Organism=Escherichia coli, GI1788225, Length=172, Percent_Identity=38.953488372093, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788644, Length=157, Percent_Identity=37.5796178343949, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787089, Length=152, Percent_Identity=40.1315789473684, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1787029, Length=149, Percent_Identity=37.5838926174497, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1789672, Length=163, Percent_Identity=33.7423312883436, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786872, Length=159, Percent_Identity=35.2201257861635, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1786398, Length=156, Percent_Identity=36.5384615384615, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1788450, Length=160, Percent_Identity=32.5, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789032, Length=157, Percent_Identity=33.1210191082803, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790162, Length=156, Percent_Identity=33.974358974359, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1788761, Length=181, Percent_Identity=35.3591160220994, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786253, Length=153, Percent_Identity=34.640522875817, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1787758, Length=153, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1789962, Length=153, Percent_Identity=31.3725490196078, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790467, Length=161, Percent_Identity=32.2981366459627, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789963, Length=171, Percent_Identity=32.1637426900585, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789864, Length=125, Percent_Identity=32.8, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI145693107, Length=122, Percent_Identity=38.5245901639344, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787105, Length=148, Percent_Identity=33.1081081081081, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081791, Length=155, Percent_Identity=31.6129032258064, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1787143, Length=163, Percent_Identity=33.1288343558282, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081709, Length=155, Percent_Identity=31.6129032258064, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789891, Length=150, Percent_Identity=32.6666666666667, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1787759, Length=174, Percent_Identity=27.0114942528736, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1789593, Length=93, Percent_Identity=35.4838709677419, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786319, Length=142, Percent_Identity=31.6901408450704, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787712, Length=164, Percent_Identity=32.3170731707317, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788506, Length=162, Percent_Identity=24.0740740740741, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787370, Length=151, Percent_Identity=33.112582781457, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1787500, Length=168, Percent_Identity=26.7857142857143, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790739, Length=159, Percent_Identity=26.4150943396226, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI48994943, Length=157, Percent_Identity=28.6624203821656, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI48994883, Length=154, Percent_Identity=29.2207792207792, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1787112, Length=154, Percent_Identity=30.5194805194805, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25146777, Length=158, Percent_Identity=36.7088607594937, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71983516, Length=149, Percent_Identity=29.5302013422819, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71983510, Length=149, Percent_Identity=29.5302013422819, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71983523, Length=149, Percent_Identity=29.5302013422819, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193211017, Length=172, Percent_Identity=32.5581395348837, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211015, Length=172, Percent_Identity=32.5581395348837, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71996809, Length=172, Percent_Identity=32.5581395348837, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193202349, Length=158, Percent_Identity=35.4430379746835, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17558664, Length=202, Percent_Identity=30.1980198019802, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567269, Length=161, Percent_Identity=32.2981366459627, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17567265, Length=161, Percent_Identity=31.6770186335404, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115535101, Length=161, Percent_Identity=31.6770186335404, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17569143, Length=152, Percent_Identity=35.5263157894737, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI212646699, Length=159, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193209708, Length=163, Percent_Identity=32.5153374233129, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI193208177, Length=169, Percent_Identity=32.5443786982249, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24648314, Length=132, Percent_Identity=34.0909090909091, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI116007328, Length=153, Percent_Identity=32.0261437908497, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574150, Length=153, Percent_Identity=32.0261437908497, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI85726357, Length=170, Percent_Identity=34.1176470588235, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24641565, Length=207, Percent_Identity=29.4685990338164, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI45551502, Length=160, Percent_Identity=31.25, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI45551501, Length=160, Percent_Identity=31.25, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI21357851, Length=160, Percent_Identity=31.25, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24659289, Length=155, Percent_Identity=30.9677419354839, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24666092, Length=114, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363262, Length=163, Percent_Identity=30.0613496932515, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015856 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 49734; Mature: 49734
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLMDTFFKKKLKVPRPISDDISVRVKNLYAIYDEKQENELVALNNISYDFKKNKIYFI CHHHHHHHHHHHCCCCCCCCCCHHEEEEEEEEEECCCCCCCEEEEECCEEEEECCEEEEE IGNSGSGKSTLVTHFNGLIISRYGFVQVGDIVSGDHYDLEHQLLGVIDSYDKKIINLLKN EECCCCCCCEEEEEECCEEEEECCCEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH QLDQTFLVLYSNEVNVQQARILFEANFKQKPVSLKFIKTKNNHELITNPYVRENTKIAVV HCCCEEEEEEECCCCHHHEEEEEECCCCCCCEEEEEEEECCCCEEECCCCEECCCEEEEE RVDKNVFLEINDKMDYDELQRFEFIKKEIKTNYHLSKKLKRFKELRRRVGFVFQFPEYQL EECCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCHHH FKDTIEKDIMFGPINLGVKKSEAKKRAKFYLNKLGLGDDYLERSPFGLSGGQKRRVAIAG HHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEEE ILAIENDILVFDEPTAGLDPAGEHEMMQIILDAKANNKTIFVITHTMEHVLEVADEVVVM EEEEECCEEEEECCCCCCCCCCCHHHEEEEEECCCCCCEEEEEEHHHHHHHHHHCCEEEE DEGEIIKTGTPYEIFFDEHIINSTSIQVPRVIAVINELIKKDSKYEVLKQKQPRTIEELA CCCCEEECCCCEEEEECCEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH DAIVEFKKGGK HHHHHHHCCCC >Mature Secondary Structure MQKLMDTFFKKKLKVPRPISDDISVRVKNLYAIYDEKQENELVALNNISYDFKKNKIYFI CHHHHHHHHHHHCCCCCCCCCCHHEEEEEEEEEECCCCCCCEEEEECCEEEEECCEEEEE IGNSGSGKSTLVTHFNGLIISRYGFVQVGDIVSGDHYDLEHQLLGVIDSYDKKIINLLKN EECCCCCCCEEEEEECCEEEEECCCEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH QLDQTFLVLYSNEVNVQQARILFEANFKQKPVSLKFIKTKNNHELITNPYVRENTKIAVV HCCCEEEEEEECCCCHHHEEEEEECCCCCCCEEEEEEEECCCCEEECCCCEECCCEEEEE RVDKNVFLEINDKMDYDELQRFEFIKKEIKTNYHLSKKLKRFKELRRRVGFVFQFPEYQL EECCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCHHH FKDTIEKDIMFGPINLGVKKSEAKKRAKFYLNKLGLGDDYLERSPFGLSGGQKRRVAIAG HHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEEE ILAIENDILVFDEPTAGLDPAGEHEMMQIILDAKANNKTIFVITHTMEHVLEVADEVVVM EEEEECCEEEEECCCCCCCCCCCHHHEEEEEECCCCCCEEEEEEHHHHHHHHHHCCEEEE DEGEIIKTGTPYEIFFDEHIINSTSIQVPRVIAVINELIKKDSKYEVLKQKQPRTIEELA CCCCEEECCCCEEEEECCEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH DAIVEFKKGGK HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]