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The map label for this gene is pepF_2 [H]

Identifier: 209554097

GI number: 209554097

Start: 730755

End: 732581

Strand: Reverse

Name: pepF_2 [H]

Synonym: UUR10_0610

Alternate gene names: 209554097

Gene position: 732581-730755 (Counterclockwise)

Preceding gene: 209554179

Following gene: 209554603

Centisome position: 83.77

GC content: 24.3

Gene sequence:

>1827_bases
ATGAATAATATTGATAATAAAAAATATGATTGGGATTTAGATTCGTTACTTAATAATCAAAGTCTAAATACTTTATTTAA
TGAATTTGTTAATTCAAATAATGAGGTAATATTAGCATTTAATAGTTGGATAAATAGTTTGAATGATTTTATTCATTTTC
ATGAAGTATCAGAAAAGAATTTAATAATTAACAATCGCATTAATAATTATGTTTCTAATAAACTTCAAGAAAATTTAATT
GATGATGAAATGATTAGTTGATCACAAAAACTTGAGCACGAACACTATCGTGTAGCAAAAGCGTTTGTTAATTTTGATAA
TATTGTTATTAAAAATAAAGATTTAATTAATATATATTTAAAAGATCCACGATTAACTAAGTATCAATTAGAATATGATG
AACTATGACGTTTTGAAAATCATACTTTAAATGAAGAACAACAAAAGATTTTAACAAGTGTTGGTCGTTTTAGTGGTGGA
TTTGGAGACATTTTTGATACATTATTAGATTCTGATATGAAATATCAAGATGGATTAAACCATAAAAATCAAAAAGTTTG
TTTTAAAAACCAAGTTGATATTTATGTTGCTTTAAAAGCAAAAGATCGTGTTTTACGAAAATCAGCTTATGAATCCCATT
TTAAAGCAATATATGATTTAAGAAATACTTTTACTAAAACATTATATTATGAATATGCTAAACAAAATGAATTAGCAAAA
ATTCATCATTTTAAAGATTATATAGAAGCTGATGCTTTTAGTGATGAAGTTAGCAAGGATTTTATTGAGCATGTTTATAC
GCAGACCAAAAAATTTGCTAAAGGAATTAAAAAGTATGCTCACTATCGTGCACTTTTTTTAAAACAACAATATAAATTAA
AAAAACTTGAACCATGAGATAAAAATTTAGATTTAATTAATAAAAAGAACAAGTTTTCTATTGAAGAAGCAAAACAACTA
AGCCTAGAAGCGTTGGCATTGTTGGGTGATGAGTATTTAAATGTTGTTAAAAAAGCGTTTGATGAACGATGAATTTCATG
ATTGCCAACTAAAAATAAAATTTCTGGTGCTTATTCAATCGGGGATACTAAAGGGTTAGATAAATTTTTTATTTTAATGA
ATTATGATGAAACTTATAATTCTGTTTTAACCTTAGTTCATGAACTAGGACATTCAGTTCATACTTATTTTGCAAATCAA
GCACAAGAAGTATACAATGAGTACAAAACTTTTTATGCTGAAATTGCTTCAATTTCTAATGAAGTTTTAATGAATTATTA
TTTACTACAAAAATATAAAGAGAATAATTTAATTCGTCTTTATATTTTAGATGAAATGATAAATGGCTTCATTGCGACAA
CAACACGTCAAGCTATTTTTTCAAATTTTGAATGAATAGCTAACCAATGAGTTAATGAAGGACAAGAATTTAGTTGAAAT
AAAATAGCTTTAACTTATTTAACAATAAACCAAGAATATACTGGTTATAAATTTAATAAAAATAAAATTAGCAAACATGA
TGAAGCAAATGCTTTAATTGCTATTAATGTTCCCCATTTTTATGCTGGAAATTTTTATGTATACAAATATGTTGTGGGTC
AAATTTGTGGATTAATTAATGCTGAAAGAATTTTTAATAATACTCCTAATGCTAAAGAAAAGTTTTTTGCATTTTTTAAA
TCAGGTGGTAGTTTATCTGCACTTGACACCATTAAAATTTTAGATATTAAGATTGATGAAAGTGGTGTATGAGATGAAGC
TAATAATATTTTTAATGGTTGAATAAATGATTATGCAACATTAATTAATAAACTATTGAATAAATAA

Upstream 100 bases:

>100_bases
CTAATTTTAATAGTTTGCAATAATTAAAAATTAAAAAATGACTAAGTGTATTAGACTTGGTCATTTTTTGTATAAATTCA
TAAAGGAAATTTTATTTTAC

Downstream 100 bases:

>100_bases
AAAATATAATTTTTATTATATTTTATGTTATAATTTATAAGGGTATTTTTATACGCAAAAGGGGGAGATTGGATTTGGTA
GAACATAAACAAAAAAAGAC

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MNNIDNKKYDWDLDSLLNNQSLNTLFNEFVNSNNEVILAFNSWINSLNDFIHFHEVSEKNLIINNRINNYVSNKLQENLI
DDEMISWSQKLEHEHYRVAKAFVNFDNIVIKNKDLINIYLKDPRLTKYQLEYDELWRFENHTLNEEQQKILTSVGRFSGG
FGDIFDTLLDSDMKYQDGLNHKNQKVCFKNQVDIYVALKAKDRVLRKSAYESHFKAIYDLRNTFTKTLYYEYAKQNELAK
IHHFKDYIEADAFSDEVSKDFIEHVYTQTKKFAKGIKKYAHYRALFLKQQYKLKKLEPWDKNLDLINKKNKFSIEEAKQL
SLEALALLGDEYLNVVKKAFDERWISWLPTKNKISGAYSIGDTKGLDKFFILMNYDETYNSVLTLVHELGHSVHTYFANQ
AQEVYNEYKTFYAEIASISNEVLMNYYLLQKYKENNLIRLYILDEMINGFIATTTRQAIFSNFEWIANQWVNEGQEFSWN
KIALTYLTINQEYTGYKFNKNKISKHDEANALIAINVPHFYAGNFYVYKYVVGQICGLINAERIFNNTPNAKEKFFAFFK
SGGSLSALDTIKILDIKIDESGVWDEANNIFNGWINDYATLINKLLNK

Sequences:

>Translated_608_residues
MNNIDNKKYDWDLDSLLNNQSLNTLFNEFVNSNNEVILAFNSWINSLNDFIHFHEVSEKNLIINNRINNYVSNKLQENLI
DDEMIS*SQKLEHEHYRVAKAFVNFDNIVIKNKDLINIYLKDPRLTKYQLEYDEL*RFENHTLNEEQQKILTSVGRFSGG
FGDIFDTLLDSDMKYQDGLNHKNQKVCFKNQVDIYVALKAKDRVLRKSAYESHFKAIYDLRNTFTKTLYYEYAKQNELAK
IHHFKDYIEADAFSDEVSKDFIEHVYTQTKKFAKGIKKYAHYRALFLKQQYKLKKLEP*DKNLDLINKKNKFSIEEAKQL
SLEALALLGDEYLNVVKKAFDER*IS*LPTKNKISGAYSIGDTKGLDKFFILMNYDETYNSVLTLVHELGHSVHTYFANQ
AQEVYNEYKTFYAEIASISNEVLMNYYLLQKYKENNLIRLYILDEMINGFIATTTRQAIFSNFE*IANQ*VNEGQEFS*N
KIALTYLTINQEYTGYKFNKNKISKHDEANALIAINVPHFYAGNFYVYKYVVGQICGLINAERIFNNTPNAKEKFFAFFK
SGGSLSALDTIKILDIKIDESGV*DEANNIFNG*INDYATLINKLLNK
>Mature_608_residues
MNNIDNKKYDWDLDSLLNNQSLNTLFNEFVNSNNEVILAFNSWINSLNDFIHFHEVSEKNLIINNRINNYVSNKLQENLI
DDEMIS*SQKLEHEHYRVAKAFVNFDNIVIKNKDLINIYLKDPRLTKYQLEYDEL*RFENHTLNEEQQKILTSVGRFSGG
FGDIFDTLLDSDMKYQDGLNHKNQKVCFKNQVDIYVALKAKDRVLRKSAYESHFKAIYDLRNTFTKTLYYEYAKQNELAK
IHHFKDYIEADAFSDEVSKDFIEHVYTQTKKFAKGIKKYAHYRALFLKQQYKLKKLEP*DKNLDLINKKNKFSIEEAKQL
SLEALALLGDEYLNVVKKAFDER*IS*LPTKNKISGAYSIGDTKGLDKFFILMNYDETYNSVLTLVHELGHSVHTYFANQ
AQEVYNEYKTFYAEIASISNEVLMNYYLLQKYKENNLIRLYILDEMINGFIATTTRQAIFSNFE*IANQ*VNEGQEFS*N
KIALTYLTINQEYTGYKFNKNKISKHDEANALIAINVPHFYAGNFYVYKYVVGQICGLINAERIFNNTPNAKEKFFAFFK
SGGSLSALDTIKILDIKIDESGV*DEANNIFNG*INDYATLINKLLNK

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69582; Mature: 69582

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIDNKKYDWDLDSLLNNQSLNTLFNEFVNSNNEVILAFNSWINSLNDFIHFHEVSEKN
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
LIINNRINNYVSNKLQENLIDDEMISSQKLEHEHYRVAKAFVNFDNIVIKNKDLINIYLK
EEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEE
DPRLTKYQLEYDELRFENHTLNEEQQKILTSVGRFSGGFGDIFDTLLDSDMKYQDGLNHK
CCCCEEEEECHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCCC
NQKVCFKNQVDIYVALKAKDRVLRKSAYESHFKAIYDLRNTFTKTLYYEYAKQNELAKIH
CCCEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HFKDYIEADAFSDEVSKDFIEHVYTQTKKFAKGIKKYAHYRALFLKQQYKLKKLEPDKNL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DLINKKNKFSIEEAKQLSLEALALLGDEYLNVVKKAFDERISLPTKNKISGAYSIGDTKG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC
LDKFFILMNYDETYNSVLTLVHELGHSVHTYFANQAQEVYNEYKTFYAEIASISNEVLMN
CCEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYLLQKYKENNLIRLYILDEMINGFIATTTRQAIFSNFEIANQVNEGQEFSNKIALTYLT
HHHHHHHCCCCEEEEEEEHHHHCCHHHHHHHHHHHHCHHHHHHHHCCHHHCCCEEEEEEE
INQEYTGYKFNKNKISKHDEANALIAINVPHFYAGNFYVYKYVVGQICGLINAERIFNNT
ECCCCCCEEECCCCCCCCCCCCEEEEEECCCEECCCEEEHHHHHHHHHHHHHHHHHHCCC
PNAKEKFFAFFKSGGSLSALDTIKILDIKIDESGVDEANNIFNGINDYATLINKLLNK
CCHHHHHHHHHHCCCCEEHCCEEEEEEEEECCCCCCHHHHHHHCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNIDNKKYDWDLDSLLNNQSLNTLFNEFVNSNNEVILAFNSWINSLNDFIHFHEVSEKN
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
LIINNRINNYVSNKLQENLIDDEMISSQKLEHEHYRVAKAFVNFDNIVIKNKDLINIYLK
EEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEE
DPRLTKYQLEYDELRFENHTLNEEQQKILTSVGRFSGGFGDIFDTLLDSDMKYQDGLNHK
CCCCEEEEECHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCCC
NQKVCFKNQVDIYVALKAKDRVLRKSAYESHFKAIYDLRNTFTKTLYYEYAKQNELAKIH
CCCEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HFKDYIEADAFSDEVSKDFIEHVYTQTKKFAKGIKKYAHYRALFLKQQYKLKKLEPDKNL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DLINKKNKFSIEEAKQLSLEALALLGDEYLNVVKKAFDERISLPTKNKISGAYSIGDTKG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC
LDKFFILMNYDETYNSVLTLVHELGHSVHTYFANQAQEVYNEYKTFYAEIASISNEVLMN
CCEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYLLQKYKENNLIRLYILDEMINGFIATTTRQAIFSNFEIANQVNEGQEFSNKIALTYLT
HHHHHHHCCCCEEEEEEEHHHHCCHHHHHHHHHHHHCHHHHHHHHCCHHHCCCEEEEEEE
INQEYTGYKFNKNKISKHDEANALIAINVPHFYAGNFYVYKYVVGQICGLINAERIFNNT
ECCCCCCEEECCCCCCCCCCCCEEEEEECCCEECCCEEEHHHHHHHHHHHHHHHHHHCCC
PNAKEKFFAFFKSGGSLSALDTIKILDIKIDESGVDEANNIFNGINDYATLINKLLNK
CCHHHHHHHHHHCCCCEEHCCEEEEEEEEECCCCCCHHHHHHHCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]