| Definition | Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome. |
|---|---|
| Accession | NC_011374 |
| Length | 874,478 |
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The map label for this gene is thrS [H]
Identifier: 209554092
GI number: 209554092
Start: 745561
End: 747303
Strand: Reverse
Name: thrS [H]
Synonym: UUR10_0626
Alternate gene names: 209554092
Gene position: 747303-745561 (Counterclockwise)
Preceding gene: 209554225
Following gene: 209554057
Centisome position: 85.46
GC content: 28.28
Gene sequence:
>1743_bases ATGTATAAGTTTGATCCAAAACTAAATCATAGTGCTGCGCATGTTTTAGCAATGGCACTAACAAAATTTTATCCTAACTT AAGTCTTGCAATTGGTCCAGCTATTGATGAGGGCTTTTATTATGATTTTAATTTAAATGATCCAAATACCTCAATCACCC CTATCGATTTATTGAAAATTGAAAAAGAAATGAAAAAAATTGCTGCTCAAGCATTAACTTTTGACTATGAACAAGTTAGC TATGAACAAGCAAAAGATTTATTTAAAAATAACAAATACAAATTAGACATTATTGAAGAAAATAAGAATAAACCACTTTC AATTTATCATTCAGGTAAATGATTTGATTTGTGTAAAGGTCCTCATGTTGAAAATACAAAAGAAATTAAAGCAATTAAGT TATTAAATATTGCTGGTTCATATTGACGAGGCGATGCAAATAATGATCAACTAATTCGTATTTATGGTGTTGCTTTTAAT GACCAAGCCCAATTAGATGCTTATTTAGTTGATTTACAAGAACGTAAAGAACGTGATCATCGTAAAATTGGTAAAGATTT AAATTTATTTACTTTTAATAATTTAGCTGGTCAAGGTTTACCAATCTGATTACCAAATGGAACAATTATTAAAAGTCAAG TTCAAAAATTTATTAATGAAGTTGAATTTCAATTTAATTTTGACACTGTTATTACGCCAATATTAGGAAGTATTGATTTA TATAAAACAAGTGGTCATTGAGATCATTATAAAGACAATATTTTTTCACCAGTTCAAATTGATAATGAAGTATTAATACT TCGTCCAATGACATGTCCCCATCATACATTAGTTTATTCTAATGAACTACGTTCATATCGTAGTTTACCAATTCGTTTAA GTGAACATTCAATTTTACATCGTTATGAATCATCTGGTGGATTAACTGGTTTTGAACGAGTGCGTGAAATGATTTTAGAA GATTGCCATGTATTCTGTCGTCCTGATCAGATTGAACATGAAGTAATTAATGCTTTTAAAATGATTCAAGAAGCACAAGA AGGATTAGGTATTAAAACATTTGAAATTCATTTATCTTTAAATGATCCAAATGATAAAGAAAAATACTATGATGATCCTC AAATGTGAGAACATTCACAAAATGCATTACGTAAAATGTTAAAAGATCATAAAATTCCTTACAAAGAAATGGTCGGCGAA GCAGCATTTTATGGGCCAAAAATTGATTTCCAAGTTAAAACAGTTTTAAATCGAATCATTACAGTTTCAACTATTCAATT AGACTTTTTATTACCAAATCGTTTTAATTTAAGTTATATTAATGAAAACAATGAACAAAGCACACCAGTAATGATTCATA TTGGAATCATAGGTACTTATGAACGTTTATTAGCGATCTTATTAGAACAAACTAAAGGTGTTTTACCACTTTGATTATCA CCTGTTCAAGTAGTTATTATTCCTGTTAATGAAAATTTACATGCTGATTATGCAAAAGAATTAAATGCAAAATTACGAAA ACACTTAGTACGTAGTAGTTTAGATTTACGTAATGAACGTTTATCAAAGAAAATTCGTGAGGCACAAATTCAAAAAATTC CATATCAAATTGTTGTTGGAGATGAAGAAATTAAAAACGATAAAATGGTAACTTATCGTCGTTATGGTAGTGAAGAAACA ACAACAGTTTCTGTGGATGATTTTATAAAGGTGTTAGAAAACGACATCAGATCAAAAAAATAA
Upstream 100 bases:
>100_bases AGCAAAATATGGATTTTATAGACTTATTATCTTTATGTAAAGTTATATAATATATTAATGAAAGAAAATAATTATTTAAA AATATTTTATCGAGGTATTT
Downstream 100 bases:
>100_bases ATTAAATAATGTTATTTTTAATATAATTAATAGATTATTGTTCGAAGAGGTGAATATATAATGGCGATTAAACGAGGCGT TCGATTGCAATGCAATGAGA
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MYKFDPKLNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKIEKEMKKIAAQALTFDYEQVS YEQAKDLFKNNKYKLDIIEENKNKPLSIYHSGKWFDLCKGPHVENTKEIKAIKLLNIAGSYWRGDANNDQLIRIYGVAFN DQAQLDAYLVDLQERKERDHRKIGKDLNLFTFNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDL YKTSGHWDHYKDNIFSPVQIDNEVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTGFERVREMILE DCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYYDDPQMWEHSQNALRKMLKDHKIPYKEMVGE AAFYGPKIDFQVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQTKGVLPLWLS PVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQKIPYQIVVGDEEIKNDKMVTYRRYGSEET TTVSVDDFIKVLENDIRSKK
Sequences:
>Translated_580_residues MYKFDPKLNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKIEKEMKKIAAQALTFDYEQVS YEQAKDLFKNNKYKLDIIEENKNKPLSIYHSGK*FDLCKGPHVENTKEIKAIKLLNIAGSY*RGDANNDQLIRIYGVAFN DQAQLDAYLVDLQERKERDHRKIGKDLNLFTFNNLAGQGLPI*LPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDL YKTSGH*DHYKDNIFSPVQIDNEVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTGFERVREMILE DCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYYDDPQM*EHSQNALRKMLKDHKIPYKEMVGE AAFYGPKIDFQVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQTKGVLPL*LS PVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQKIPYQIVVGDEEIKNDKMVTYRRYGSEET TTVSVDDFIKVLENDIRSKK >Mature_580_residues MYKFDPKLNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKIEKEMKKIAAQALTFDYEQVS YEQAKDLFKNNKYKLDIIEENKNKPLSIYHSGK*FDLCKGPHVENTKEIKAIKLLNIAGSY*RGDANNDQLIRIYGVAFN DQAQLDAYLVDLQERKERDHRKIGKDLNLFTFNNLAGQGLPI*LPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDL YKTSGH*DHYKDNIFSPVQIDNEVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTGFERVREMILE DCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYYDDPQM*EHSQNALRKMLKDHKIPYKEMVGE AAFYGPKIDFQVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQTKGVLPL*LS PVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQKIPYQIVVGDEEIKNDKMVTYRRYGSEET TTVSVDDFIKVLENDIRSKK
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38570111, Length=546, Percent_Identity=36.4468864468864, Blast_Score=337, Evalue=2e-92, Organism=Homo sapiens, GI38202255, Length=536, Percent_Identity=36.5671641791045, Blast_Score=336, Evalue=4e-92, Organism=Homo sapiens, GI20070344, Length=551, Percent_Identity=35.934664246824, Blast_Score=316, Evalue=3e-86, Organism=Escherichia coli, GI1788013, Length=574, Percent_Identity=36.2369337979094, Blast_Score=392, Evalue=1e-110, Organism=Caenorhabditis elegans, GI71984184, Length=542, Percent_Identity=35.4243542435424, Blast_Score=326, Evalue=2e-89, Organism=Caenorhabditis elegans, GI71984192, Length=542, Percent_Identity=35.4243542435424, Blast_Score=325, Evalue=3e-89, Organism=Saccharomyces cerevisiae, GI6322112, Length=581, Percent_Identity=35.6282271944923, Blast_Score=339, Evalue=9e-94, Organism=Saccharomyces cerevisiae, GI6322654, Length=381, Percent_Identity=34.6456692913386, Blast_Score=226, Evalue=8e-60, Organism=Drosophila melanogaster, GI24583842, Length=565, Percent_Identity=35.7522123893805, Blast_Score=340, Evalue=1e-93, Organism=Drosophila melanogaster, GI28574141, Length=565, Percent_Identity=35.7522123893805, Blast_Score=340, Evalue=1e-93, Organism=Drosophila melanogaster, GI24583839, Length=565, Percent_Identity=35.7522123893805, Blast_Score=340, Evalue=2e-93,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 66083; Mature: 66083
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKFDPKLNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKI CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHH EKEMKKIAAQALTFDYEQVSYEQAKDLFKNNKYKLDIIEENKNKPLSIYHSGKFDLCKGP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCC HVENTKEIKAIKLLNIAGSYRGDANNDQLIRIYGVAFNDQAQLDAYLVDLQERKERDHRK CCCCCHHEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH IGKDLNLFTFNNLAGQGLPILPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLYKT HCCCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHCCEEEEEC SGHDHYKDNIFSPVQIDNEVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYES CCCCCHHHCCCCCEEECCCEEEEECCCCCCCEEEECHHHHHHHCCCEEECCHHHHHHHHC SGGLTGFERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPN CCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCC DKEKYYDDPQMEHSQNALRKMLKDHKIPYKEMVGEAAFYGPKIDFQVKTVLNRIITVSTI CCHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCCCCEEHHHHHHHHEEEEEE QLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQTKGVLPLLSPVQVVI EEEEECCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE IPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQKIPYQIVVGDEEIKN EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCC DKMVTYRRYGSEETTTVSVDDFIKVLENDIRSKK CCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCC >Mature Secondary Structure MYKFDPKLNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKI CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHH EKEMKKIAAQALTFDYEQVSYEQAKDLFKNNKYKLDIIEENKNKPLSIYHSGKFDLCKGP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCC HVENTKEIKAIKLLNIAGSYRGDANNDQLIRIYGVAFNDQAQLDAYLVDLQERKERDHRK CCCCCHHEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH IGKDLNLFTFNNLAGQGLPILPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLYKT HCCCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHCCEEEEEC SGHDHYKDNIFSPVQIDNEVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYES CCCCCHHHCCCCCEEECCCEEEEECCCCCCCEEEECHHHHHHHCCCEEECCHHHHHHHHC SGGLTGFERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPN CCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCC DKEKYYDDPQMEHSQNALRKMLKDHKIPYKEMVGEAAFYGPKIDFQVKTVLNRIITVSTI CCHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCCCCEEHHHHHHHHEEEEEE QLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQTKGVLPLLSPVQVVI EEEEECCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE IPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQKIPYQIVVGDEEIKN EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCC DKMVTYRRYGSEETTTVSVDDFIKVLENDIRSKK CCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA