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The map label for this gene is gspE [C]

Identifier: 209551762

GI number: 209551762

Start: 4365197

End: 4366672

Strand: Direct

Name: gspE [C]

Synonym: Rleg2_4191

Alternate gene names: 209551762

Gene position: 4365197-4366672 (Clockwise)

Preceding gene: 209551761

Following gene: 209551763

Centisome position: 96.19

GC content: 62.4

Gene sequence:

>1476_bases
ATGTTTGGAAAACGCGGAAATGAAGGGTCCGGAAAGGTCGGAGGGGCGATTGCTCCCCCGCCGCCGGCTCCGGCTGCCGC
CCCTGCGGCCTCTTCCCCCTCCATTCTGGTCGAACCTTCGCGCGAGCCCGCACGCCAGCAGGTGACGCCGCCGCCGATGC
AGACGCCGCAGCGCAAGCGCCCTGTTCGCACCGATGAATATTACGACACCAAGGCGCAGGTCTTTTCCGCGCTGATCGAT
ACGATCGATCTCTCGCAGCTTTCCAAGCTCGACGGCGAAAGCGCACGCGAAGAAATCCGCGACATCGTCAACGACATCAT
CACCATCAAGAACTTTGCGATGTCGATCTCCGAGCAGGAGGAACTGCTCGAGGATATCTGCAACGACGTCCTCGGCTACG
GTCCGCTGGAGCCGTTGCTGGCGCGTGACGACATCGCCGACATCATGGTCAACGGCGCCGGCCAGACTTTCATCGAAGTC
GGTGGCAAGACGATCGAATCGGAGATCCGCTTCCGCGACAATGCGCAGCTTCTCTCGATCTGCCAGCGCATCGTCAGCCA
GGTCGGCCGCCGCGTCGACGAATCGAGCCCGATCTGCGACGCCCGCCTGCCTGACGGCTCGCGCGTCAACGTTATCGCGC
CGCCGTTGTCGATCGACGGGCCGGCGCTCACCATCCGCAAATTCAAGAAGGACAAACTGACGCTCGATCAGCTCGTCCGT
TTCGGTGCGATCACCGCGGAAGGCGCGACCGTGCTGCAGATCATCGGCCGGGTGCGCTGCAACGTCGTCATCTCAGGCGG
TACCGGCTCGGGCAAGACGACGCTGCTGAACTGCCTTACCAACTATATCGACAGGGATGAACGCGTCATCACCTGCGAGG
ATACCGCCGAACTGCAGCTGCAGCAGCCGCATGTCGTGCGTTTGGAAACGCGCCCGCCGAATATCGAAGGCGAGGGCGAG
ATCACCATGCGCGATCTCGTCAAGAACTGCCTGCGTATGCGTCCCGAGCGCATCATCGTCGGCGAAGTGCGCGGACCTGA
AGTTTTCGACCTTTTGCAGGCGATGAACACCGGTCACGACGGCTCTATGGGCACCATCCACGCCAACACGCCGCGCGAAT
GCCTGAGCCGTATCGAATCGATGATCGCCATGGGTGGCTTCACCCTGCCGGCAAAGACGGTGCGCGAGATCATCTCCAGC
TCGGTTGATGTGATCATCCAGGCGGCGCGCCTCCGCGACGGCTCGCGCCGCATCACCCAGATCACCGAGGTGATCGGCAT
GGAAGGCGACGTCATCATCACCCAGGACCTGATGCGCTATGAGATCGAAGGCGAAGATGCCGGCGGCCGCCTGATCGGCC
GGCACATGTCGACCGGCGTCGGCAAACCGCATTTCTGGGATCGCGCCCGCTACTTCAACGAGGAAAAGCGCCTAGCCGCT
GCCCTCGACGCGATGGAAGCGAAAACGAAGGATTAG

Upstream 100 bases:

>100_bases
GTTTTGCGTCAGGAATTGCGTGAAAACAAAAAGATAGAGCATTTCCGTGACTCGGAGAAAAACGGAAATGCTCTAGAACA
AGCAGATTGGATTGAGCGGC

Downstream 100 bases:

>100_bases
GCGAGATGTTCGGGTTCGATCCGATAGTGCTGGCAATCGTCGTCCTTGCCGCCGTCTCCGCGGCGGCGGTCGCCTATGCC
CTGATGTATTCCCGGATCGA

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MFGKRGNEGSGKVGGAIAPPPPAPAAAPAASSPSILVEPSREPARQQVTPPPMQTPQRKRPVRTDEYYDTKAQVFSALID
TIDLSQLSKLDGESAREEIRDIVNDIITIKNFAMSISEQEELLEDICNDVLGYGPLEPLLARDDIADIMVNGAGQTFIEV
GGKTIESEIRFRDNAQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLSIDGPALTIRKFKKDKLTLDQLVR
FGAITAEGATVLQIIGRVRCNVVISGGTGSGKTTLLNCLTNYIDRDERVITCEDTAELQLQQPHVVRLETRPPNIEGEGE
ITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRIESMIAMGGFTLPAKTVREIISS
SVDVIIQAARLRDGSRRITQITEVIGMEGDVIITQDLMRYEIEGEDAGGRLIGRHMSTGVGKPHFWDRARYFNEEKRLAA
ALDAMEAKTKD

Sequences:

>Translated_491_residues
MFGKRGNEGSGKVGGAIAPPPPAPAAAPAASSPSILVEPSREPARQQVTPPPMQTPQRKRPVRTDEYYDTKAQVFSALID
TIDLSQLSKLDGESAREEIRDIVNDIITIKNFAMSISEQEELLEDICNDVLGYGPLEPLLARDDIADIMVNGAGQTFIEV
GGKTIESEIRFRDNAQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLSIDGPALTIRKFKKDKLTLDQLVR
FGAITAEGATVLQIIGRVRCNVVISGGTGSGKTTLLNCLTNYIDRDERVITCEDTAELQLQQPHVVRLETRPPNIEGEGE
ITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRIESMIAMGGFTLPAKTVREIISS
SVDVIIQAARLRDGSRRITQITEVIGMEGDVIITQDLMRYEIEGEDAGGRLIGRHMSTGVGKPHFWDRARYFNEEKRLAA
ALDAMEAKTKD
>Mature_491_residues
MFGKRGNEGSGKVGGAIAPPPPAPAAAPAASSPSILVEPSREPARQQVTPPPMQTPQRKRPVRTDEYYDTKAQVFSALID
TIDLSQLSKLDGESAREEIRDIVNDIITIKNFAMSISEQEELLEDICNDVLGYGPLEPLLARDDIADIMVNGAGQTFIEV
GGKTIESEIRFRDNAQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLSIDGPALTIRKFKKDKLTLDQLVR
FGAITAEGATVLQIIGRVRCNVVISGGTGSGKTTLLNCLTNYIDRDERVITCEDTAELQLQQPHVVRLETRPPNIEGEGE
ITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRIESMIAMGGFTLPAKTVREIISS
SVDVIIQAARLRDGSRRITQITEVIGMEGDVIITQDLMRYEIEGEDAGGRLIGRHMSTGVGKPHFWDRARYFNEEKRLAA
ALDAMEAKTKD

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 53817; Mature: 53817

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKRGNEGSGKVGGAIAPPPPAPAAAPAASSPSILVEPSREPARQQVTPPPMQTPQRKR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCC
PVRTDEYYDTKAQVFSALIDTIDLSQLSKLDGESAREEIRDIVNDIITIKNFAMSISEQE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLEDICNDVLGYGPLEPLLARDDIADIMVNGAGQTFIEVGGKTIESEIRFRDNAQLLSI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEHHCCHHHHHHHHCCCCHHHHHH
CQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLSIDGPALTIRKFKKDKLTLDQLVR
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHH
FGAITAEGATVLQIIGRVRCNVVISGGTGSGKTTLLNCLTNYIDRDERVITCEDTAELQL
HCCCCCCCHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEE
QQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHD
CCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCC
GSMGTIHANTPRECLSRIESMIAMGGFTLPAKTVREIISSSVDVIIQAARLRDGSRRITQ
CCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
ITEVIGMEGDVIITQDLMRYEIEGEDAGGRLIGRHMSTGVGKPHFWDRARYFNEEKRLAA
HHHHHCCCCCEEEECHHHHEEECCCCCCCCEEHHHHHCCCCCCCHHHHHHHHCHHHHHHH
ALDAMEAKTKD
HHHHHHHCCCC
>Mature Secondary Structure
MFGKRGNEGSGKVGGAIAPPPPAPAAAPAASSPSILVEPSREPARQQVTPPPMQTPQRKR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCC
PVRTDEYYDTKAQVFSALIDTIDLSQLSKLDGESAREEIRDIVNDIITIKNFAMSISEQE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLEDICNDVLGYGPLEPLLARDDIADIMVNGAGQTFIEVGGKTIESEIRFRDNAQLLSI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEHHCCHHHHHHHHCCCCHHHHHH
CQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLSIDGPALTIRKFKKDKLTLDQLVR
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHH
FGAITAEGATVLQIIGRVRCNVVISGGTGSGKTTLLNCLTNYIDRDERVITCEDTAELQL
HCCCCCCCHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEE
QQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHD
CCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCC
GSMGTIHANTPRECLSRIESMIAMGGFTLPAKTVREIISSSVDVIIQAARLRDGSRRITQ
CCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
ITEVIGMEGDVIITQDLMRYEIEGEDAGGRLIGRHMSTGVGKPHFWDRARYFNEEKRLAA
HHHHHCCCCCEEEECHHHHEEECCCCCCCCEEHHHHHCCCCCCCHHHHHHHHCHHHHHHH
ALDAMEAKTKD
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]