| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551761
Identifier: 209551761
GI number: 209551761
Start: 4363787
End: 4365064
Strand: Direct
Name: 209551761
Synonym: Rleg2_4190
Alternate gene names: NA
Gene position: 4363787-4365064 (Clockwise)
Preceding gene: 209551760
Following gene: 209551762
Centisome position: 96.16
GC content: 61.89
Gene sequence:
>1278_bases ATGAGCGCGATCGAATACGAAATCAAAAATCCGAGCGAGCTTCGCCAGGCCGAGGAGGCCGTGCGCATGGCGGATCTGGA AAGCATGCGGCCGCTGCCACGCATCTCCGTGCATGCCTTCTGCGAGAGCGAAGCGCTGCAGCAGGTCATGGAACGCTGCG CCAATGATCGACGTGTGGCCAAGGTCAGCCTGCGCATCACCAGCGGCGGCATCGCCGCTGCCGCCAATATGTTTTCCGGC GCCCCGACGCCGAACCTCATCATCCTAGAGACCAAGGCGAACGCGGGCAGCCTCCTCGCCGAGCTTGCGCCGCTCGCCGC CGTCTGCGACCCCAGCACCAAGGTCGTCATCGTCGGCTATTACAACGATATCGCGCTTTATCGCGAACTCATCCGTAACG GCATCTCCGAATATATGGTCCAACCGGTCGCCATGCCTGATATTCTGACGGCGATGGCTTCGATCTTCGTCGATCCGGAA GCCGAGCCGCTCGGCCGCAGCATCGCCTTTATCGGCTCGAAGGGCGGCACCGGCGCTTCGACCATCGCGCATAATTGCGC CTTCGGCATTTCCAATCTCTTCTCCACCGAGACGATCCTGGCCGATCTCGACCTGCCCTATGGCACGGCGAACATCGACT TCGATCAGGATCCGGCGCTCGGTATCGCCGAAGCGGTCTTCGCACCCGACCGCCTCGACGAGGTCTTCCTCGACCGTCTG CTGACGAAATGCTCCGAGCATCTTTCCCTGCTTGCCGCACCTTCACTGCTCGACCGCGCCTATGATTTCGACGGTCATGC TTTCCAGCCGGTGCTCGATGTCCTGCAGCGCAGCGCGCCCGTCACCGTGCTCGACGTTCCGCATGCATGGTCGGAATGGA CGCGCTCGGTGCTGTCGAGCGTCGACGAAGTGGTCATCACCGCGGTTCCCGACCTCGCCAACCTGCGCAACGCCAAGAAC ATGCTGGATGCGCTGCGCAAGATGCGGCCGAACGACAAGCCGCCTCATCTCGTCCTCAATCAGGTCGGCATGCCGAAGCG CCCGGAGATTTCGCCGTCGGATTTCTGTGAGCCGCTGGAGATCGATCCGATCGCGATCATCCCCTTCGACATCAATCTTT TCGGCAATGCCGCCAATAGCGGCCGGATGATCTCGGAAGTCGACCCGAAATCGCCGACGGCGGAGACCTTTTCGCAGATC TCGCACATCGTCACCGGCCGTGTTGCCATCAGGAAGGCGAAGAAGGGCGGCCTGCTGGGCCTCCTGAAGCGTAAGTAG
Upstream 100 bases:
>100_bases CGCAGCGGCGCAACAATGCGATCCAGGAATACCGGACGACGACATCGACGATCGAGGATGTCGCCGGCAGCGACAGCAGC TTCTGAGACGGAACGGGATG
Downstream 100 bases:
>100_bases ACGATGAGCAATTCCAGCAAAAGTGTGCAGCGGTTTTGCGTCAGGAATTGCGTGAAAACAAAAAGATAGAGCATTTCCGT GACTCGGAGAAAAACGGAAA
Product: response regulator receiver protein
Products: NA
Alternate protein names: Pilus Assembly Protein CpaE; Pilus Assembly Protein; Response Regulator Receiver Domain-Containing Protein; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like; Pilus Assembly ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Response Regulator; Flp Pilus Assembly Protein; Response Regulator Receiver; Flp Pilus Assembly Protein ATPase; Two-Component Response Regulator; CtpF Protein; Flp Pilus Assembly ATPase; Septum Site-Determining Protein; Fimbriae Assembly-Related Protein; CpaE2 Pilus Assembly Protein; ParaA Family ATPase; Flp Pilus Assembly Response Receiver ATPase CpaE; TadE-Like; Cobyrinic Acid Ac-Diamide Synthase; Component Of Type IV Pilus; Components Of Type IV Pilus
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSAIEYEIKNPSELRQAEEAVRMADLESMRPLPRISVHAFCESEALQQVMERCANDRRVAKVSLRITSGGIAAAANMFSG APTPNLIILETKANAGSLLAELAPLAAVCDPSTKVVIVGYYNDIALYRELIRNGISEYMVQPVAMPDILTAMASIFVDPE AEPLGRSIAFIGSKGGTGASTIAHNCAFGISNLFSTETILADLDLPYGTANIDFDQDPALGIAEAVFAPDRLDEVFLDRL LTKCSEHLSLLAAPSLLDRAYDFDGHAFQPVLDVLQRSAPVTVLDVPHAWSEWTRSVLSSVDEVVITAVPDLANLRNAKN MLDALRKMRPNDKPPHLVLNQVGMPKRPEISPSDFCEPLEIDPIAIIPFDINLFGNAANSGRMISEVDPKSPTAETFSQI SHIVTGRVAIRKAKKGGLLGLLKRK
Sequences:
>Translated_425_residues MSAIEYEIKNPSELRQAEEAVRMADLESMRPLPRISVHAFCESEALQQVMERCANDRRVAKVSLRITSGGIAAAANMFSG APTPNLIILETKANAGSLLAELAPLAAVCDPSTKVVIVGYYNDIALYRELIRNGISEYMVQPVAMPDILTAMASIFVDPE AEPLGRSIAFIGSKGGTGASTIAHNCAFGISNLFSTETILADLDLPYGTANIDFDQDPALGIAEAVFAPDRLDEVFLDRL LTKCSEHLSLLAAPSLLDRAYDFDGHAFQPVLDVLQRSAPVTVLDVPHAWSEWTRSVLSSVDEVVITAVPDLANLRNAKN MLDALRKMRPNDKPPHLVLNQVGMPKRPEISPSDFCEPLEIDPIAIIPFDINLFGNAANSGRMISEVDPKSPTAETFSQI SHIVTGRVAIRKAKKGGLLGLLKRK >Mature_424_residues SAIEYEIKNPSELRQAEEAVRMADLESMRPLPRISVHAFCESEALQQVMERCANDRRVAKVSLRITSGGIAAAANMFSGA PTPNLIILETKANAGSLLAELAPLAAVCDPSTKVVIVGYYNDIALYRELIRNGISEYMVQPVAMPDILTAMASIFVDPEA EPLGRSIAFIGSKGGTGASTIAHNCAFGISNLFSTETILADLDLPYGTANIDFDQDPALGIAEAVFAPDRLDEVFLDRLL TKCSEHLSLLAAPSLLDRAYDFDGHAFQPVLDVLQRSAPVTVLDVPHAWSEWTRSVLSSVDEVVITAVPDLANLRNAKNM LDALRKMRPNDKPPHLVLNQVGMPKRPEISPSDFCEPLEIDPIAIIPFDINLFGNAANSGRMISEVDPKSPTAETFSQIS HIVTGRVAIRKAKKGGLLGLLKRK
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46067; Mature: 45936
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIEYEIKNPSELRQAEEAVRMADLESMRPLPRISVHAFCESEALQQVMERCANDRRVA CCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE KVSLRITSGGIAAAANMFSGAPTPNLIILETKANAGSLLAELAPLAAVCDPSTKVVIVGY EEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEE YNDIALYRELIRNGISEYMVQPVAMPDILTAMASIFVDPEAEPLGRSIAFIGSKGGTGAS CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHH TIAHNCAFGISNLFSTETILADLDLPYGTANIDFDQDPALGIAEAVFAPDRLDEVFLDRL HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH LTKCSEHLSLLAAPSLLDRAYDFDGHAFQPVLDVLQRSAPVTVLDVPHAWSEWTRSVLSS HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH VDEVVITAVPDLANLRNAKNMLDALRKMRPNDKPPHLVLNQVGMPKRPEISPSDFCEPLE HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCC IDPIAIIPFDINLFGNAANSGRMISEVDPKSPTAETFSQISHIVTGRVAIRKAKKGGLLG CCCEEEEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE LLKRK CCCCC >Mature Secondary Structure SAIEYEIKNPSELRQAEEAVRMADLESMRPLPRISVHAFCESEALQQVMERCANDRRVA CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE KVSLRITSGGIAAAANMFSGAPTPNLIILETKANAGSLLAELAPLAAVCDPSTKVVIVGY EEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEE YNDIALYRELIRNGISEYMVQPVAMPDILTAMASIFVDPEAEPLGRSIAFIGSKGGTGAS CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHH TIAHNCAFGISNLFSTETILADLDLPYGTANIDFDQDPALGIAEAVFAPDRLDEVFLDRL HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH LTKCSEHLSLLAAPSLLDRAYDFDGHAFQPVLDVLQRSAPVTVLDVPHAWSEWTRSVLSS HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH VDEVVITAVPDLANLRNAKNMLDALRKMRPNDKPPHLVLNQVGMPKRPEISPSDFCEPLE HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCC IDPIAIIPFDINLFGNAANSGRMISEVDPKSPTAETFSQISHIVTGRVAIRKAKKGGLLG CCCEEEEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE LLKRK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA