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The map label for this gene is 209551760

Identifier: 209551760

GI number: 209551760

Start: 4363038

End: 4363772

Strand: Direct

Name: 209551760

Synonym: Rleg2_4189

Alternate gene names: NA

Gene position: 4363038-4363772 (Clockwise)

Preceding gene: 209551759

Following gene: 209551761

Centisome position: 96.15

GC content: 62.72

Gene sequence:

>735_bases
ATGGAAGAGAACAGAGATCAGGCGATGGCCCATATCAATTCGACGACACCCCGCCTCGGAATCGAGAAGGGGCTCTTTGC
CGCGGTCGCCATGGTGCTGGCCGTGCTTTCCGGATGCGCCGGCCCGCACGACCAGCTGACGACCGGCGGCATTCCCGACG
ACTATCGCGCCCGCCACCCGATCATCGTGACCGAAGCGGAACAGACGGTCGATATACCCGTGGCCTCCACCGATCGCCGG
CTGACAAACGCCCAGCGCGACCTCATTCGCGGTTTTGCCGCAAACTACATCGCCCGCGCCTCGGGTCCGGTTTACGTGCT
GTCGCCGCAAGGCTCGCCGAATTCAGCGGCAGCCTATCAGCTGCGCAATCAGGTCCGTGCCGAGCTGGCCTCAAGGGGGA
TCGCAAGCTCGAAAATCGTCAACACTTCCTACGCCGCGGTCGGGCCCGGCGATGCGGCGCCGATCCGGCTGAGCTTTACA
GGCACCACCGCGATTACCACCCAATGCGGCCAGTGGCCGAAAGACATCTCGAACGATTTCACCAACCAGAATTACTATAA
TTTCGGCTGTGCTTCGCAGAACAACCTCGCCGCCCAGATAGCCAATCCGGAGGATCTGGTGGCGCCCCGCGGCATGACGC
CGATCGACGCGCAGCGGCGCAACAATGCGATCCAGGAATACCGGACGACGACATCGACGATCGAGGATGTCGCCGGCAGC
GACAGCAGCTTCTGA

Upstream 100 bases:

>100_bases
TCAACAAGGTCTATGGCCGCCGCGAGGCGCCCGTCGCCGATGCGCAGTTCCACGGATCGATCGGGTTCATCTACAAATGA
GCGGGGCAGGATCGGCAGCA

Downstream 100 bases:

>100_bases
GACGGAACGGGATGATGAGCGCGATCGAATACGAAATCAAAAATCCGAGCGAGCTTCGCCAGGCCGAGGAGGCCGTGCGC
ATGGCGGATCTGGAAAGCAT

Product: pilus biogenesis lipoprotein CpaD

Products: NA

Alternate protein names: Pilus Assembly Protein CpaD; Pilus Assembly Protein; Type IV Pili Component-Like; Components Of Type IV Pilus; Component Of Type IV Pilus

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MEENRDQAMAHINSTTPRLGIEKGLFAAVAMVLAVLSGCAGPHDQLTTGGIPDDYRARHPIIVTEAEQTVDIPVASTDRR
LTNAQRDLIRGFAANYIARASGPVYVLSPQGSPNSAAAYQLRNQVRAELASRGIASSKIVNTSYAAVGPGDAAPIRLSFT
GTTAITTQCGQWPKDISNDFTNQNYYNFGCASQNNLAAQIANPEDLVAPRGMTPIDAQRRNNAIQEYRTTTSTIEDVAGS
DSSF

Sequences:

>Translated_244_residues
MEENRDQAMAHINSTTPRLGIEKGLFAAVAMVLAVLSGCAGPHDQLTTGGIPDDYRARHPIIVTEAEQTVDIPVASTDRR
LTNAQRDLIRGFAANYIARASGPVYVLSPQGSPNSAAAYQLRNQVRAELASRGIASSKIVNTSYAAVGPGDAAPIRLSFT
GTTAITTQCGQWPKDISNDFTNQNYYNFGCASQNNLAAQIANPEDLVAPRGMTPIDAQRRNNAIQEYRTTTSTIEDVAGS
DSSF
>Mature_244_residues
MEENRDQAMAHINSTTPRLGIEKGLFAAVAMVLAVLSGCAGPHDQLTTGGIPDDYRARHPIIVTEAEQTVDIPVASTDRR
LTNAQRDLIRGFAANYIARASGPVYVLSPQGSPNSAAAYQLRNQVRAELASRGIASSKIVNTSYAAVGPGDAAPIRLSFT
GTTAITTQCGQWPKDISNDFTNQNYYNFGCASQNNLAAQIANPEDLVAPRGMTPIDAQRRNNAIQEYRTTTSTIEDVAGS
DSSF

Specific function: Unknown

COG id: COG5461

COG function: function code N; Type IV pili component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26090; Mature: 26090

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENRDQAMAHINSTTPRLGIEKGLFAAVAMVLAVLSGCAGPHDQLTTGGIPDDYRARHP
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
IIVTEAEQTVDIPVASTDRRLTNAQRDLIRGFAANYIARASGPVYVLSPQGSPNSAAAYQ
EEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
LRNQVRAELASRGIASSKIVNTSYAAVGPGDAAPIRLSFTGTTAITTQCGQWPKDISNDF
HHHHHHHHHHHCCCCHHHEECCCEEECCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHH
TNQNYYNFGCASQNNLAAQIANPEDLVAPRGMTPIDAQRRNNAIQEYRTTTSTIEDVAGS
CCCCCEEECCCCCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DSSF
CCCC
>Mature Secondary Structure
MEENRDQAMAHINSTTPRLGIEKGLFAAVAMVLAVLSGCAGPHDQLTTGGIPDDYRARHP
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
IIVTEAEQTVDIPVASTDRRLTNAQRDLIRGFAANYIARASGPVYVLSPQGSPNSAAAYQ
EEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
LRNQVRAELASRGIASSKIVNTSYAAVGPGDAAPIRLSFTGTTAITTQCGQWPKDISNDF
HHHHHHHHHHHCCCCHHHEECCCEEECCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHH
TNQNYYNFGCASQNNLAAQIANPEDLVAPRGMTPIDAQRRNNAIQEYRTTTSTIEDVAGS
CCCCCEEECCCCCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DSSF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA