| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is add [H]
Identifier: 209551751
GI number: 209551751
Start: 4355350
End: 4356318
Strand: Reverse
Name: add [H]
Synonym: Rleg2_4180
Alternate gene names: 209551751
Gene position: 4356318-4355350 (Counterclockwise)
Preceding gene: 209551752
Following gene: 209551750
Centisome position: 96.0
GC content: 63.26
Gene sequence:
>969_bases GTGACGTTGCATTTGAAGAAGGTCGAATTGCACTGCCATCTGGAGGGTGCAGCTCCTCCTGAACTGACCGCGGCGCAGGC GCGCAAATACGGCGTCGACATCAGCGGCGAGCTTCGCGGCGGAGCCTATGTCTGGCATGACTTCGCAAGTTTCCTCGAAT GTTACGATAAGGTTTCCGAGGTCTACAGGACCGAGGAGGACTATGCGCGTCTGACTGAGACCTATCTCGACGAACTCGCC GGCATCAATACGATCTACAGCGAACTCATCGTTTCGCCCGACCACGGCAAACGCATCGGCCTCGGCGCCGACGCCTATAT CTCAGGCATCTGCGAAGGCATCCGGCGGGCCAGGGAAAAGAGCGGCATCGAAGCCCGGCTGATCGTCACCGGCGAGCGGC ATTTCGGTCCGGAGAGCGTCATCGGCGCGGCCGAATACGCGGCAAAGGCCGGCAATCCTTTGATAACCGGCTTCAACCTT GCCGGCGAGGAGCGCATGGGGCGCGTTGCCGACTATGCCAGGGCCTTCGATATCGCCCGCGATGCCGGCCTGGGGCTCAC CATCCATGCCGGCGAGGTCTGCGGCGCCTTCAGCGTCGCCGACGCGCTCGATGCGGTACACCCCTCGCGCATCGGCCATG GCGTGCGCGCCGTCGAGGATGTCGATCTGGTGAAGCGGCTTGCCGATCTCGGCACCGTGCTCGAGGTCTGCCCGGGCTCC AATATCGCGCTCGGGGTCTTTCCCGATTTCGCTTCGCATCCGCTGCGCCGGCTGAAGGAAGCCGGCGTGCGGGTGACCAT CAGCTCGGACGATCCGCCTTTCTTTCATACTTCGCTTGCGCGGGAATACGAACTTGCCGCCGAGGCTTTCGGCTTCAGCG ACGCCGAGATCGATGCCATGACGCGAACGGCGATCGAAGCGGCCTTCGTCGACGAAGAGACACGCAAGGCGCTGCTCGCC CGGCTTTGA
Upstream 100 bases:
>100_bases GGTCGCGTTCAATCGGCGTGCGCCGCAGCTATGCCGATATCGGCGAGAGCATTGCGCGCCATCTCGGCATTCCGGCCGGA CCGCATGGAAGGAGTTTTCT
Downstream 100 bases:
>100_bases GGCCAAATGTGGAGCGAGGCTGGGGAAGATCGGCGCAAATTTACCGCCACTCTTGCGGTCGGGCCGATTTCCGTGAAAGA AACATTCGATAGAAAGAATG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTLHLKKVELHCHLEGAAPPELTAAQARKYGVDISGELRGGAYVWHDFASFLECYDKVSEVYRTEEDYARLTETYLDELA GINTIYSELIVSPDHGKRIGLGADAYISGICEGIRRAREKSGIEARLIVTGERHFGPESVIGAAEYAAKAGNPLITGFNL AGEERMGRVADYARAFDIARDAGLGLTIHAGEVCGAFSVADALDAVHPSRIGHGVRAVEDVDLVKRLADLGTVLEVCPGS NIALGVFPDFASHPLRRLKEAGVRVTISSDDPPFFHTSLAREYELAAEAFGFSDAEIDAMTRTAIEAAFVDEETRKALLA RL
Sequences:
>Translated_322_residues MTLHLKKVELHCHLEGAAPPELTAAQARKYGVDISGELRGGAYVWHDFASFLECYDKVSEVYRTEEDYARLTETYLDELA GINTIYSELIVSPDHGKRIGLGADAYISGICEGIRRAREKSGIEARLIVTGERHFGPESVIGAAEYAAKAGNPLITGFNL AGEERMGRVADYARAFDIARDAGLGLTIHAGEVCGAFSVADALDAVHPSRIGHGVRAVEDVDLVKRLADLGTVLEVCPGS NIALGVFPDFASHPLRRLKEAGVRVTISSDDPPFFHTSLAREYELAAEAFGFSDAEIDAMTRTAIEAAFVDEETRKALLA RL >Mature_321_residues TLHLKKVELHCHLEGAAPPELTAAQARKYGVDISGELRGGAYVWHDFASFLECYDKVSEVYRTEEDYARLTETYLDELAG INTIYSELIVSPDHGKRIGLGADAYISGICEGIRRAREKSGIEARLIVTGERHFGPESVIGAAEYAAKAGNPLITGFNLA GEERMGRVADYARAFDIARDAGLGLTIHAGEVCGAFSVADALDAVHPSRIGHGVRAVEDVDLVKRLADLGTVLEVCPGSN IALGVFPDFASHPLRRLKEAGVRVTISSDDPPFFHTSLAREYELAAEAFGFSDAEIDAMTRTAIEAAFVDEETRKALLAR L
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=340, Percent_Identity=25, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI226693318, Length=328, Percent_Identity=23.1707317073171, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI61175224, Length=221, Percent_Identity=25.3393665158371, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1787910, Length=326, Percent_Identity=30.0613496932515, Blast_Score=127, Evalue=7e-31, Organism=Caenorhabditis elegans, GI32565969, Length=344, Percent_Identity=25.2906976744186, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538512, Length=345, Percent_Identity=25.5072463768116, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115537133, Length=327, Percent_Identity=25.0764525993884, Blast_Score=71, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6324188, Length=333, Percent_Identity=27.9279279279279, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI24645260, Length=328, Percent_Identity=29.5731707317073, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24666073, Length=214, Percent_Identity=31.7757009345794, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI45553183, Length=194, Percent_Identity=29.3814432989691, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI17737615, Length=194, Percent_Identity=29.3814432989691, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 34850; Mature: 34718
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHLKKVELHCHLEGAAPPELTAAQARKYGVDISGELRGGAYVWHDFASFLECYDKVSE CCEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VYRTEEDYARLTETYLDELAGINTIYSELIVSPDHGKRIGLGADAYISGICEGIRRAREK HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHH SGIEARLIVTGERHFGPESVIGAAEYAAKAGNPLITGFNLAGEERMGRVADYARAFDIAR CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH DAGLGLTIHAGEVCGAFSVADALDAVHPSRIGHGVRAVEDVDLVKRLADLGTVLEVCPGS HCCCEEEEECCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC NIALGVFPDFASHPLRRLKEAGVRVTISSDDPPFFHTSLAREYELAAEAFGFSDAEIDAM CEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH TRTAIEAAFVDEETRKALLARL HHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure TLHLKKVELHCHLEGAAPPELTAAQARKYGVDISGELRGGAYVWHDFASFLECYDKVSE CEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VYRTEEDYARLTETYLDELAGINTIYSELIVSPDHGKRIGLGADAYISGICEGIRRAREK HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHH SGIEARLIVTGERHFGPESVIGAAEYAAKAGNPLITGFNLAGEERMGRVADYARAFDIAR CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH DAGLGLTIHAGEVCGAFSVADALDAVHPSRIGHGVRAVEDVDLVKRLADLGTVLEVCPGS HCCCEEEEECCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC NIALGVFPDFASHPLRRLKEAGVRVTISSDDPPFFHTSLAREYELAAEAFGFSDAEIDAM CEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH TRTAIEAAFVDEETRKALLARL HHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA