| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is punA [H]
Identifier: 209551746
GI number: 209551746
Start: 4350906
End: 4351706
Strand: Direct
Name: punA [H]
Synonym: Rleg2_4175
Alternate gene names: 209551746
Gene position: 4350906-4351706 (Clockwise)
Preceding gene: 209551745
Following gene: 209551747
Centisome position: 95.88
GC content: 63.55
Gene sequence:
>801_bases ATGAAGGCGACGGTCGATCTGCTTGCCGCATTGCTCGGCGCCATCAAGCCGCGCCACGGCATCGTGCTCGGCTCCGGCCT CGGCTCTCTCGTTGGTCAGCTGGAGGGCGCCGTGCGTATTCCCTATCGCGACCTGCCGGGCTTTCCCGTCAGCGCCGTCT CCGGCCATGCCGGCGAGGTCGTTGCCGGCCGGCTCGGCGGCGTGCCCGTCGTCATGCTCTCCGGCCGCGTGCATTATTAC GAGAAGGGCGATGCCAACGCCATGCGCCTGCCGATCGAGGTGCTGAAGTCGCTCGGCGTCGAGGCGCTGATCCTGACCAA TTCGGCCGGATCGCTCCGCGACGACATGCCGCCCGGTTCGGTGATGCAAATCACTGATCACATCAACTATTCCGGCATGA ACCCGCTGATCGGCGAGGAAAGCGACCACCGTTTCGTCGGCATGACCAATGCTTACGATGCCGGCCTCGCGACGGCGATG CAGAAGGCAGCGGCAAAGCTCAAAATCGAGCTGGCGCAAGGTGTGTACATGTGGTTCTCCGGCCCGAGCTTCGAAACGCC GGCCGAAATCCGCATGGCGCGCATCCTCGGTGCCGATGCCGTCGGCATGTCGACGGTGCCGGAGGTGATCATCGCAAGAA TGCTGGGTCTGAGGGTTGCCGCCGCCTCCGTTATCACCAACTATGGGGCGGGTATGACCGGCAATGAGCTCAGCCATGAA GAAACCAAGGACATGGCGCCCATCGGCGGTGCCCGTCTCGCCGCCATATTGAAAGAGATGATTGCGGCCAGAACCGGATA A
Upstream 100 bases:
>100_bases CCTCCAAGGACACGAAGATCTATCTCTGCGATGAGGCGGGCGTGCAGAAAACCATGACGATGGAAGAGCTCCTTCCCTTC AGCTTCGAGACCGAACTCGG
Downstream 100 bases:
>100_bases TTTTAGGCCGGGTCGGCGTAAAGTCTGAATCCTGTTCTACATTAGATAGTGAGAGCATGCTGTCATGAGAAAACCGCTCA CACTTTTCGGCATCATGCTC
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKATVDLLAALLGAIKPRHGIVLGSGLGSLVGQLEGAVRIPYRDLPGFPVSAVSGHAGEVVAGRLGGVPVVMLSGRVHYY EKGDANAMRLPIEVLKSLGVEALILTNSAGSLRDDMPPGSVMQITDHINYSGMNPLIGEESDHRFVGMTNAYDAGLATAM QKAAAKLKIELAQGVYMWFSGPSFETPAEIRMARILGADAVGMSTVPEVIIARMLGLRVAAASVITNYGAGMTGNELSHE ETKDMAPIGGARLAAILKEMIAARTG
Sequences:
>Translated_266_residues MKATVDLLAALLGAIKPRHGIVLGSGLGSLVGQLEGAVRIPYRDLPGFPVSAVSGHAGEVVAGRLGGVPVVMLSGRVHYY EKGDANAMRLPIEVLKSLGVEALILTNSAGSLRDDMPPGSVMQITDHINYSGMNPLIGEESDHRFVGMTNAYDAGLATAM QKAAAKLKIELAQGVYMWFSGPSFETPAEIRMARILGADAVGMSTVPEVIIARMLGLRVAAASVITNYGAGMTGNELSHE ETKDMAPIGGARLAAILKEMIAARTG >Mature_266_residues MKATVDLLAALLGAIKPRHGIVLGSGLGSLVGQLEGAVRIPYRDLPGFPVSAVSGHAGEVVAGRLGGVPVVMLSGRVHYY EKGDANAMRLPIEVLKSLGVEALILTNSAGSLRDDMPPGSVMQITDHINYSGMNPLIGEESDHRFVGMTNAYDAGLATAM QKAAAKLKIELAQGVYMWFSGPSFETPAEIRMARILGADAVGMSTVPEVIIARMLGLRVAAASVITNYGAGMTGNELSHE ETKDMAPIGGARLAAILKEMIAARTG
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=223, Percent_Identity=46.6367713004484, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI47132622, Length=234, Percent_Identity=28.6324786324786, Blast_Score=82, Evalue=5e-16, Organism=Escherichia coli, GI1788746, Length=242, Percent_Identity=47.1074380165289, Blast_Score=215, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17541190, Length=256, Percent_Identity=37.890625, Blast_Score=170, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6323238, Length=224, Percent_Identity=44.6428571428571, Blast_Score=172, Evalue=4e-44, Organism=Drosophila melanogaster, GI45552885, Length=238, Percent_Identity=38.655462184874, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI45552887, Length=238, Percent_Identity=38.655462184874, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI24656090, Length=238, Percent_Identity=38.655462184874, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI24656093, Length=238, Percent_Identity=38.655462184874, Blast_Score=160, Evalue=5e-40, Organism=Drosophila melanogaster, GI24762376, Length=239, Percent_Identity=34.7280334728033, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI20130079, Length=229, Percent_Identity=28.82096069869, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI221459247, Length=206, Percent_Identity=25.7281553398058, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 27764; Mature: 27764
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATVDLLAALLGAIKPRHGIVLGSGLGSLVGQLEGAVRIPYRDLPGFPVSAVSGHAGEV CCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCEECCCCCCCCCCCHHCCCCCCCE VAGRLGGVPVVMLSGRVHYYEKGDANAMRLPIEVLKSLGVEALILTNSAGSLRDDMPPGS EEHHCCCCEEEEEECEEEEEECCCCCEEECHHHHHHHCCCEEEEEECCCCCCCCCCCCCC VMQITDHINYSGMNPLIGEESDHRFVGMTNAYDAGLATAMQKAAAKLKIELAQGVYMWFS EEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEC GPSFETPAEIRMARILGADAVGMSTVPEVIIARMLGLRVAAASVITNYGAGMTGNELSHE CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH ETKDMAPIGGARLAAILKEMIAARTG HHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKATVDLLAALLGAIKPRHGIVLGSGLGSLVGQLEGAVRIPYRDLPGFPVSAVSGHAGEV CCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCEECCCCCCCCCCCHHCCCCCCCE VAGRLGGVPVVMLSGRVHYYEKGDANAMRLPIEVLKSLGVEALILTNSAGSLRDDMPPGS EEHHCCCCEEEEEECEEEEEECCCCCEEECHHHHHHHCCCEEEEEECCCCCCCCCCCCCC VMQITDHINYSGMNPLIGEESDHRFVGMTNAYDAGLATAMQKAAAKLKIELAQGVYMWFS EEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEC GPSFETPAEIRMARILGADAVGMSTVPEVIIARMLGLRVAAASVITNYGAGMTGNELSHE CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH ETKDMAPIGGARLAAILKEMIAARTG HHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10537218; 8969508; 9384377; 1629150 [H]