| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is phnK [H]
Identifier: 209551691
GI number: 209551691
Start: 4300927
End: 4301703
Strand: Reverse
Name: phnK [H]
Synonym: Rleg2_4120
Alternate gene names: 209551691
Gene position: 4301703-4300927 (Counterclockwise)
Preceding gene: 209551692
Following gene: 209551690
Centisome position: 94.79
GC content: 66.67
Gene sequence:
>777_bases ATGAGCGATATTCCGCTTCTCAAAGTCCACGACGTTTCGAAATTCTACGGCAACCGGATCGGCTGCCGCGACGTTTCCTT CGAGCTCTGGCCGGGCGAAGTGCTCGCCATCGTCGGCGAGTCCGGCTCCGGCAAGACGACGCTGCTCAACTGCCTCTCCA CCCGGCTGCTGCCGAGCACCGGCAGCGTCGAATATCACATGCGCGACGGCAGCTACCGCGATCTCTACCGGATGAACGAG GCCGAGCGGCGCTTCCTGATGCGCACCGACTGGGGCTTCGTGCACCAGAACCCGGCCGACGGCCTGCGCATGGCGGTGTC GGCCGGCGCCAATGTCGGCGAACGGCTGATGGCGATCGGCGACCGGCACTACGGCAAGATCCGCGCCTCGGCGATCGACT GGCTGGAACGAGTCGAGATCGACGCCGACCGCATCGACGACCAGCCGCGCGCCTTTTCCGGCGGCATGCGCCAGCGCCTG CAGATCGCCCGCAATCTCGTCACCGGCCCGCGCCTCGTCTTCATGGACGAACCCACAGGCGGCCTCGACGTCTCGGTGCA GGCTCGCCTGCTCGATCTGGTGCGCGGCCTCGTCAACGATCTCGGCCTCTCGGCGATCGTCGTCACCCACGATCTCGCCG TCGCCCGCCTGCTCTCGCACCGGATGATCGTGATGAAGGACGGCTACGTCATCGAACACGGGCTGACCGACCGGGTGCTC GACGACCCGCGCGAACCCTACACGCAGCTGCTCGTCTCCTCGATCCTGCAGGTCTGA
Upstream 100 bases:
>100_bases ACAGGGGCGGACGCATGTTCGTCTGCTCCGACACCGATCATTGCGAAGACCGCCGCGCCCACGGGCATGCCGGTGAAATG CTGGCCCGGGAGGCTGCAGA
Downstream 100 bases:
>100_bases GCAGTTCAAAGTTCCACAGCGTCCTTTGCGCATCTTTCGAACGCGCGACGCCGTCGGTCCGAAACCAGGAAAGAAGACAT CATGCCAACGCCCCTCGTCG
Product: phosphonate C-P lyase system protein PhnK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSDIPLLKVHDVSKFYGNRIGCRDVSFELWPGEVLAIVGESGSGKTTLLNCLSTRLLPSTGSVEYHMRDGSYRDLYRMNE AERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERLMAIGDRHYGKIRASAIDWLERVEIDADRIDDQPRAFSGGMRQRL QIARNLVTGPRLVFMDEPTGGLDVSVQARLLDLVRGLVNDLGLSAIVVTHDLAVARLLSHRMIVMKDGYVIEHGLTDRVL DDPREPYTQLLVSSILQV
Sequences:
>Translated_258_residues MSDIPLLKVHDVSKFYGNRIGCRDVSFELWPGEVLAIVGESGSGKTTLLNCLSTRLLPSTGSVEYHMRDGSYRDLYRMNE AERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERLMAIGDRHYGKIRASAIDWLERVEIDADRIDDQPRAFSGGMRQRL QIARNLVTGPRLVFMDEPTGGLDVSVQARLLDLVRGLVNDLGLSAIVVTHDLAVARLLSHRMIVMKDGYVIEHGLTDRVL DDPREPYTQLLVSSILQV >Mature_257_residues SDIPLLKVHDVSKFYGNRIGCRDVSFELWPGEVLAIVGESGSGKTTLLNCLSTRLLPSTGSVEYHMRDGSYRDLYRMNEA ERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERLMAIGDRHYGKIRASAIDWLERVEIDADRIDDQPRAFSGGMRQRLQ IARNLVTGPRLVFMDEPTGGLDVSVQARLLDLVRGLVNDLGLSAIVVTHDLAVARLLSHRMIVMKDGYVIEHGLTDRVLD DPREPYTQLLVSSILQV
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4107
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI171184400, Length=240, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI42741659, Length=229, Percent_Identity=28.3842794759825, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI9961250, Length=228, Percent_Identity=28.0701754385965, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI46592971, Length=220, Percent_Identity=30, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI46592978, Length=220, Percent_Identity=30, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI46592956, Length=220, Percent_Identity=30, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI46592915, Length=220, Percent_Identity=30, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI46592964, Length=220, Percent_Identity=30, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI45446740, Length=230, Percent_Identity=25.6521739130435, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI46592898, Length=220, Percent_Identity=30, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI47078218, Length=230, Percent_Identity=25.6521739130435, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI27477115, Length=226, Percent_Identity=24.7787610619469, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI48994997, Length=253, Percent_Identity=67.9841897233202, Blast_Score=345, Evalue=2e-96, Organism=Escherichia coli, GI1789962, Length=260, Percent_Identity=35, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1789963, Length=234, Percent_Identity=35.042735042735, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1788506, Length=245, Percent_Identity=37.1428571428571, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI145693107, Length=263, Percent_Identity=34.6007604562738, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1787500, Length=232, Percent_Identity=33.6206896551724, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787758, Length=224, Percent_Identity=36.6071428571429, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1787759, Length=243, Percent_Identity=36.2139917695473, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI48994883, Length=265, Percent_Identity=32.8301886792453, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1788225, Length=248, Percent_Identity=32.258064516129, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI87081834, Length=205, Percent_Identity=37.5609756097561, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1789672, Length=255, Percent_Identity=29.0196078431373, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788761, Length=253, Percent_Identity=29.6442687747036, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI87081791, Length=257, Percent_Identity=28.7937743190661, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787547, Length=264, Percent_Identity=29.5454545454545, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1789032, Length=233, Percent_Identity=30.0429184549356, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786398, Length=257, Percent_Identity=26.8482490272374, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=27.6315789473684, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=25.2032520325203, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789891, Length=209, Percent_Identity=28.7081339712919, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1786872, Length=252, Percent_Identity=30.5555555555556, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=27.7310924369748, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789873, Length=236, Percent_Identity=31.7796610169492, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787370, Length=258, Percent_Identity=25.968992248062, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788644, Length=258, Percent_Identity=30.2325581395349, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI87081709, Length=255, Percent_Identity=26.6666666666667, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1789890, Length=230, Percent_Identity=30.4347826086957, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787105, Length=234, Percent_Identity=31.6239316239316, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787712, Length=245, Percent_Identity=31.0204081632653, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787548, Length=238, Percent_Identity=27.3109243697479, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790467, Length=231, Percent_Identity=27.7056277056277, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1787164, Length=241, Percent_Identity=30.2904564315353, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790525, Length=242, Percent_Identity=25.6198347107438, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1786563, Length=227, Percent_Identity=27.3127753303965, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786253, Length=236, Percent_Identity=29.2372881355932, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786703, Length=184, Percent_Identity=35.8695652173913, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1786319, Length=232, Percent_Identity=26.2931034482759, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790162, Length=255, Percent_Identity=25.8823529411765, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790190, Length=223, Percent_Identity=26.9058295964126, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786803, Length=247, Percent_Identity=28.3400809716599, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788450, Length=251, Percent_Identity=24.7011952191235, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1789991, Length=227, Percent_Identity=26.431718061674, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787792, Length=224, Percent_Identity=28.125, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1786345, Length=224, Percent_Identity=28.125, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI87082267, Length=251, Percent_Identity=26.2948207171315, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788210, Length=229, Percent_Identity=27.0742358078603, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48995001, Length=227, Percent_Identity=26.8722466960352, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789593, Length=243, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789586, Length=257, Percent_Identity=26.4591439688716, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI87082268, Length=237, Percent_Identity=26.1603375527426, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787112, Length=239, Percent_Identity=30.5439330543933, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1790544, Length=258, Percent_Identity=24.8062015503876, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790534, Length=226, Percent_Identity=28.7610619469027, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788472, Length=221, Percent_Identity=26.2443438914027, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533608, Length=245, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI193202349, Length=218, Percent_Identity=30.7339449541284, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17558664, Length=239, Percent_Identity=27.6150627615063, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193211015, Length=238, Percent_Identity=29.8319327731092, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71996809, Length=238, Percent_Identity=29.8319327731092, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI212646699, Length=226, Percent_Identity=27.8761061946903, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17552010, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193211017, Length=238, Percent_Identity=29.8319327731092, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17569145, Length=219, Percent_Identity=27.3972602739726, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71984940, Length=220, Percent_Identity=28.1818181818182, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115534520, Length=212, Percent_Identity=26.4150943396226, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363262, Length=222, Percent_Identity=28.3783783783784, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24653245, Length=222, Percent_Identity=28.3783783783784, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641565, Length=231, Percent_Identity=26.8398268398268, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24643674, Length=222, Percent_Identity=24.7747747747748, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI85724864, Length=231, Percent_Identity=30.7359307359307, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24580555, Length=231, Percent_Identity=30.7359307359307, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI85816269, Length=231, Percent_Identity=30.7359307359307, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24580553, Length=231, Percent_Identity=30.7359307359307, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI161076682, Length=197, Percent_Identity=30.4568527918782, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI161076684, Length=197, Percent_Identity=30.4568527918782, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24581617, Length=197, Percent_Identity=30.4568527918782, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24581615, Length=197, Percent_Identity=30.4568527918782, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI23397593, Length=241, Percent_Identity=29.045643153527, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012700 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 28846; Mature: 28714
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIPLLKVHDVSKFYGNRIGCRDVSFELWPGEVLAIVGESGSGKTTLLNCLSTRLLPST CCCCCEEEEECHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCC GSVEYHMRDGSYRDLYRMNEAERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERLMAIG CCEEEEECCCCHHHHHHHCHHHHHEEHCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHC DRHYGKIRASAIDWLERVEIDADRIDDQPRAFSGGMRQRLQIARNLVTGPRLVFMDEPTG CCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC GLDVSVQARLLDLVRGLVNDLGLSAIVVTHDLAVARLLSHRMIVMKDGYVIEHGLTDRVL CCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCEEEEECCEEEECCCCHHHH DDPREPYTQLLVSSILQV CCCCCHHHHHHHHHHHCC >Mature Secondary Structure SDIPLLKVHDVSKFYGNRIGCRDVSFELWPGEVLAIVGESGSGKTTLLNCLSTRLLPST CCCCEEEEECHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCC GSVEYHMRDGSYRDLYRMNEAERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERLMAIG CCEEEEECCCCHHHHHHHCHHHHHEEHCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHC DRHYGKIRASAIDWLERVEIDADRIDDQPRAFSGGMRQRLQIARNLVTGPRLVFMDEPTG CCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC GLDVSVQARLLDLVRGLVNDLGLSAIVVTHDLAVARLLSHRMIVMKDGYVIEHGLTDRVL CCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCEEEEECCEEEECCCCHHHH DDPREPYTQLLVSSILQV CCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]