| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is phnN [C]
Identifier: 209551682
GI number: 209551682
Start: 4292609
End: 4293205
Strand: Reverse
Name: phnN [C]
Synonym: Rleg2_4111
Alternate gene names: 209551682
Gene position: 4293205-4292609 (Counterclockwise)
Preceding gene: 209551683
Following gene: 209551681
Centisome position: 94.61
GC content: 67.84
Gene sequence:
>597_bases ATGAGCCCGCGCGAACCCCACGCCGCAGCCGGAGCCGAGCGCGGCATCATGGTCGTCGTCGTCGGACCGAGCGGCGCCGG CAAGGACACGCTGATGAACCTCGCGGCCCGGCGTTTTGCCGGCCGTGAAAACGTTCACTTCACCCGCCGCGTCATCACCC GTCACCGCGATGCCGGCGGCGAGGATCATCTTTCCGTCTCCCTCGAAGGGTTTGCCGCGATGGAGCAATCAGGCTCCTTT GCCGTCTGGTGGGAAGCGCACGGCCTGAAATACGGCATTCCGGCCGAGGTCTCGGTGGCGCTGTCGCGAGGCCATATCGT CGTCGCCAACGGCTCGCGCTCGGCGCTGCACCGTTTCCAGGCCGCCTTCCCGCGGCTGAAGGTCATCAACGTCACCGCCA GCCCCGAAGTGCTCGCCGGCCGGCTGGAGGCGCGCGGACGTGAGACGCATGAGGATATCATGGCGCGGCTCGCCCGCGGG CCGCTGACGGTGCGCGGCGAATACGACGTGACGGAACTCGACAATAGCGGCTCGCTCGAAGAGGCCGAGCAGAAGATGAT CGCCATCCTCGACGGGCTGCTCGCCGAGGTGCACTGA
Upstream 100 bases:
>100_bases GCCGGATCGCGACGGGACTGCGCGCCGATCTCGTCCGCGTCCACCGCGCGCATGGCGTGCCGGTGACACGCTCCGTCTGG CGCCAGGGACGCCGCGTCGC
Downstream 100 bases:
>100_bases CCGGGTCGGGAGGACGGCATGCGCGCGATCAAAGTGGTCGACTACGATCCTTTCTGGCCGCGGCTCTTTGCAGAAATCCG CACCGAGATCTCCACCCTGC
Product: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
Products: NA
Alternate protein names: TdRPase 1 [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSPREPHAAAGAERGIMVVVVGPSGAGKDTLMNLAARRFAGRENVHFTRRVITRHRDAGGEDHLSVSLEGFAAMEQSGSF AVWWEAHGLKYGIPAEVSVALSRGHIVVANGSRSALHRFQAAFPRLKVINVTASPEVLAGRLEARGRETHEDIMARLARG PLTVRGEYDVTELDNSGSLEEAEQKMIAILDGLLAEVH
Sequences:
>Translated_198_residues MSPREPHAAAGAERGIMVVVVGPSGAGKDTLMNLAARRFAGRENVHFTRRVITRHRDAGGEDHLSVSLEGFAAMEQSGSF AVWWEAHGLKYGIPAEVSVALSRGHIVVANGSRSALHRFQAAFPRLKVINVTASPEVLAGRLEARGRETHEDIMARLARG PLTVRGEYDVTELDNSGSLEEAEQKMIAILDGLLAEVH >Mature_197_residues SPREPHAAAGAERGIMVVVVGPSGAGKDTLMNLAARRFAGRENVHFTRRVITRHRDAGGEDHLSVSLEGFAAMEQSGSFA VWWEAHGLKYGIPAEVSVALSRGHIVVANGSRSALHRFQAAFPRLKVINVTASPEVLAGRLEARGRETHEDIMARLARGP LTVRGEYDVTELDNSGSLEEAEQKMIAILDGLLAEVH
Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790532, Length=180, Percent_Identity=36.1111111111111, Blast_Score=100, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR012699 - InterPro: IPR013102 - InterPro: IPR000053 - InterPro: IPR017872 - InterPro: IPR013466 [H]
Pfam domain/function: PF00591 Glycos_transf_3; PF07831 PYNP_C [H]
EC number: =2.4.2.4 [H]
Molecular weight: Translated: 21380; Mature: 21248
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPREPHAAAGAERGIMVVVVGPSGAGKDTLMNLAARRFAGRENVHFTRRVITRHRDAGG CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC EDHLSVSLEGFAAMEQSGSFAVWWEAHGLKYGIPAEVSVALSRGHIVVANGSRSALHRFQ CCEEEEEECCHHHHHCCCCEEEEEECCCEEECCCCEEEEEEECCEEEEECCCHHHHHHHH AAFPRLKVINVTASPEVLAGRLEARGRETHEDIMARLARGPLTVRGEYDVTELDNSGSLE HHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCEECCCCCCHH EAEQKMIAILDGLLAEVH HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPREPHAAAGAERGIMVVVVGPSGAGKDTLMNLAARRFAGRENVHFTRRVITRHRDAGG CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC EDHLSVSLEGFAAMEQSGSFAVWWEAHGLKYGIPAEVSVALSRGHIVVANGSRSALHRFQ CCEEEEEECCHHHHHCCCCEEEEEECCCEEECCCCEEEEEEECCEEEEECCCHHHHHHHH AAFPRLKVINVTASPEVLAGRLEARGRETHEDIMARLARGPLTVRGEYDVTELDNSGSLE HHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCEECCCCCCHH EAEQKMIAILDGLLAEVH HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA