| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is catD [H]
Identifier: 209551635
GI number: 209551635
Start: 4238768
End: 4239619
Strand: Reverse
Name: catD [H]
Synonym: Rleg2_4064
Alternate gene names: 209551635
Gene position: 4239619-4238768 (Counterclockwise)
Preceding gene: 209551636
Following gene: 209551634
Centisome position: 93.43
GC content: 60.45
Gene sequence:
>852_bases ATGCGCGCAACCGCGATCGGCATGCTGACGTTGTTTTCGATGTTTCTCACCGTTACCGGCGCTCAATCCGGCGAGCGCTG GGCAGAGCTTCCGGCTTTTCCGGCGATGCCCGTGCCGAAGACCAGCGGCATGGCTGAAGTGAACGACATCAAGATGTATT ACGCCGAATATGGTGAAGGCGAGCCGATGCTCTTCATCCATGGCGGGCTTGGCAATGCCGATGTCTGGGGTCACCAGATC GCCGAATTCTCCAAAGACCACCTGGTCATCGTTGCCGACAGCCGCGGGCATGGACGCTCGACGCGCAGCCAAAAGCCCTT CGGCTACGACCTGATGACATCGGATTATGCAGCCCTTCTCGACCATCTGAAGATCGGCAAGGTGACGCTGGTGGGATGGT CTAACGGCGGCATCATCGGCATCGACATGGCGATGAACCATCCGGAAAAGCTGACGCGCGTCATTGCCCAGGCGGCCAAT GTGACCACGGACGGCGTCAAGCCCGACGTCTTGAGCAACAAGACCTTCAACGACTATATCAACGTCGCCGGCGAACAATA CCGGAAGCTGTCGCCGACGCCGAACGAGTACGACGCCTTCGTCACCCAGATCTCCGAGATGTGGGCGACCCAGCCGGCCT GGACGGCAGCGGATCTCGGAAAGATCACGGTGCCGGTCACGCTCGCCATCGGCGATCACGACGAAGCCGTGAAGCTCGAC CATACCGAGGTGATGGCGAAAGACATTCCGGGCGCAAAGCTGGTGATCCTGAAAGAGGCCAGCCATTTCGCCATGCTGCA GGATCCCGCGGGCTACAATGCGATGATCCGGGAGGCGATGGCGGGCCGCTGA
Upstream 100 bases:
>100_bases ACCTATGCAGCTGACGATTGTCAGGCAGTAGCGATGCGATATCTTCCTTTCGGGCCATAACGGCCCGAGGGGCCATAACT GCCCGACAAGGGGGATGATG
Downstream 100 bases:
>100_bases AAACCGCTGCGGGCGCTCCCCTCTTTCCATCGCTGCTTAATTGGTTTATAGGCAGCGCCAGCGTCAGGTTCGCCTGCTCG CATTCACGGCCAAAGCTGGA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MRATAIGMLTLFSMFLTVTGAQSGERWAELPAFPAMPVPKTSGMAEVNDIKMYYAEYGEGEPMLFIHGGLGNADVWGHQI AEFSKDHLVIVADSRGHGRSTRSQKPFGYDLMTSDYAALLDHLKIGKVTLVGWSNGGIIGIDMAMNHPEKLTRVIAQAAN VTTDGVKPDVLSNKTFNDYINVAGEQYRKLSPTPNEYDAFVTQISEMWATQPAWTAADLGKITVPVTLAIGDHDEAVKLD HTEVMAKDIPGAKLVILKEASHFAMLQDPAGYNAMIREAMAGR
Sequences:
>Translated_283_residues MRATAIGMLTLFSMFLTVTGAQSGERWAELPAFPAMPVPKTSGMAEVNDIKMYYAEYGEGEPMLFIHGGLGNADVWGHQI AEFSKDHLVIVADSRGHGRSTRSQKPFGYDLMTSDYAALLDHLKIGKVTLVGWSNGGIIGIDMAMNHPEKLTRVIAQAAN VTTDGVKPDVLSNKTFNDYINVAGEQYRKLSPTPNEYDAFVTQISEMWATQPAWTAADLGKITVPVTLAIGDHDEAVKLD HTEVMAKDIPGAKLVILKEASHFAMLQDPAGYNAMIREAMAGR >Mature_283_residues MRATAIGMLTLFSMFLTVTGAQSGERWAELPAFPAMPVPKTSGMAEVNDIKMYYAEYGEGEPMLFIHGGLGNADVWGHQI AEFSKDHLVIVADSRGHGRSTRSQKPFGYDLMTSDYAALLDHLKIGKVTLVGWSNGGIIGIDMAMNHPEKLTRVIAQAAN VTTDGVKPDVLSNKTFNDYINVAGEQYRKLSPTPNEYDAFVTQISEMWATQPAWTAADLGKITVPVTLAIGDHDEAVKLD HTEVMAKDIPGAKLVILKEASHFAMLQDPAGYNAMIREAMAGR
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI221316588, Length=255, Percent_Identity=25.4901960784314, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24649021, Length=261, Percent_Identity=22.9885057471264, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 30816; Mature: 30816
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRATAIGMLTLFSMFLTVTGAQSGERWAELPAFPAMPVPKTSGMAEVNDIKMYYAEYGEG CCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHEEEEEEECCCC EPMLFIHGGLGNADVWGHQIAEFSKDHLVIVADSRGHGRSTRSQKPFGYDLMTSDYAALL CEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH DHLKIGKVTLVGWSNGGIIGIDMAMNHPEKLTRVIAQAANVTTDGVKPDVLSNKTFNDYI HHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH NVAGEQYRKLSPTPNEYDAFVTQISEMWATQPAWTAADLGKITVPVTLAIGDHDEAVKLD HHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEEEEEECCCCCEEEEC HTEVMAKDIPGAKLVILKEASHFAMLQDPAGYNAMIREAMAGR HHHHHHHCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure MRATAIGMLTLFSMFLTVTGAQSGERWAELPAFPAMPVPKTSGMAEVNDIKMYYAEYGEG CCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHEEEEEEECCCC EPMLFIHGGLGNADVWGHQIAEFSKDHLVIVADSRGHGRSTRSQKPFGYDLMTSDYAALL CEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH DHLKIGKVTLVGWSNGGIIGIDMAMNHPEKLTRVIAQAANVTTDGVKPDVLSNKTFNDYI HHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH NVAGEQYRKLSPTPNEYDAFVTQISEMWATQPAWTAADLGKITVPVTLAIGDHDEAVKLD HHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEEEEEECCCCCEEEEC HTEVMAKDIPGAKLVILKEASHFAMLQDPAGYNAMIREAMAGR HHHHHHHCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]