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The map label for this gene is yesO [H]

Identifier: 209551586

GI number: 209551586

Start: 4185170

End: 4186456

Strand: Direct

Name: yesO [H]

Synonym: Rleg2_4015

Alternate gene names: 209551586

Gene position: 4185170-4186456 (Clockwise)

Preceding gene: 209551580

Following gene: 209551587

Centisome position: 92.23

GC content: 60.84

Gene sequence:

>1287_bases
ATGAGCCTACGTGTAAGCAGACGTAATTTCATAGCGGGAGGCGCAACGCTTCTTTCGCTCTCGGCGCTCGGTACCAGCGC
TTTTGCACAGGAAAAGCGCTTGCGCCTCCTGTGGTGGGGCTCGCAGCCGCGCGCCGACCGCACCAACAAGGTTTCGCAAC
TCTATCAGACGAAGAATGCCGGTACGTCGATCACCGGCGAATTCCTCGGCTGGGGCGATTACTGGCCGCGCCTTGCGACC
CAGGTCGCCGGCCGCAATGCGCCCGACGTCATCCAGATGGATTATCGCTATATCGTTCAGTATGCACGGCGTGGCGCACT
CGCACCGCTTGAATCCTATATGCCGGCCAAGCTCAACCTTGACGATTTCGACAAGGCGCAGATCGAAGGCGGCAGCGTCG
ACGGCCATCTCTATGGCGTCAGCCTGGGTGCAAACTCGGCCGCGACGGTGCTGAACACCACCGCCTTCAAGGAAGCCGGG
GTCGATCTGCCGACACAGGCGACCACCTGGGAAGAATTCGGCCGTATGGGTGCGGAGATCACCAAGGCAGGCAAACGCAA
GGGCATGTTCGGCCTCGCCGACGGCAGTGGCGGTGAACCGCTGTTCGAAAACTGGCTGCGCCAGCGCGGCAAGGGCCTCT
ATACCGCCGACGGCAAGATCGCCTTCGACGTCGACGATGCATCGGAATGGTATGACATGTGGGCGAAGTTCCGTGAGGCC
GGCGCTTGCGTTCCCGCCGATATCCAGGCTCTCGACAAGAACGATATCGAAACCAACACGGTGTCGCTCGGCAAGGCAGC
CGCCGGTTTTGCACATTCAAACCAGTTCGTCGCCTATCAGGCCATGAACAAGGACAAGCTGGCGCTCACCAATTACATGC
GCATCAAGGCGGATTCGAAGGGCGGCCACTACCGCAAGCCTTCGATGTTCTTCTCGGTCTCGGCCCAGTCGAAAGCGATC
GACTTGGCAGTGGATTACATCAACTTCTTCGTCAAGAACCCCGAAGCAGTGCTGCTCTTGGATGTCGAACGCGGCATTCC
GGAATCGGCTGCCATGCGCGAGGTTGTTGCGGCGAAACTCGATGAGAACGGCAAGGTCGCGCTGGCCTATGTCAGCGGCC
TTGGCGACCTCGCTGGCAAATTGCCGCCGCCGCCGCCGGCCGGCGCCGGTGAAGGCGAGCTGATGCTGCGCAACATCGCC
GAACAGGTCGGCTTCGGCCAGCTGTCTCCTTCCGATGGCGGCAAACAGCTTGTCACCGAAATCACGCAGATTCTCGCACG
AGGCTGA

Upstream 100 bases:

>100_bases
GCTTGCCGCTTTGCTCGTAGCTTGTAACCAATTAGTTATTTATGCAAGAGTAACGACATCGGAAGCGTGTGGAGGCGCTT
CCCCTTTGGAGGAGGAAAAA

Downstream 100 bases:

>100_bases
TCCCGTATGAGCAATGCGATGCGCACGCCCGCAGGGGCTATATCAGTGGAACGATATCAGGGGGCCGTGGCCGAGGGACG
CTTCCGGCGTCTCTGGAACG

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSLRVSRRNFIAGGATLLSLSALGTSAFAQEKRLRLLWWGSQPRADRTNKVSQLYQTKNAGTSITGEFLGWGDYWPRLAT
QVAGRNAPDVIQMDYRYIVQYARRGALAPLESYMPAKLNLDDFDKAQIEGGSVDGHLYGVSLGANSAATVLNTTAFKEAG
VDLPTQATTWEEFGRMGAEITKAGKRKGMFGLADGSGGEPLFENWLRQRGKGLYTADGKIAFDVDDASEWYDMWAKFREA
GACVPADIQALDKNDIETNTVSLGKAAAGFAHSNQFVAYQAMNKDKLALTNYMRIKADSKGGHYRKPSMFFSVSAQSKAI
DLAVDYINFFVKNPEAVLLLDVERGIPESAAMREVVAAKLDENGKVALAYVSGLGDLAGKLPPPPPAGAGEGELMLRNIA
EQVGFGQLSPSDGGKQLVTEITQILARG

Sequences:

>Translated_428_residues
MSLRVSRRNFIAGGATLLSLSALGTSAFAQEKRLRLLWWGSQPRADRTNKVSQLYQTKNAGTSITGEFLGWGDYWPRLAT
QVAGRNAPDVIQMDYRYIVQYARRGALAPLESYMPAKLNLDDFDKAQIEGGSVDGHLYGVSLGANSAATVLNTTAFKEAG
VDLPTQATTWEEFGRMGAEITKAGKRKGMFGLADGSGGEPLFENWLRQRGKGLYTADGKIAFDVDDASEWYDMWAKFREA
GACVPADIQALDKNDIETNTVSLGKAAAGFAHSNQFVAYQAMNKDKLALTNYMRIKADSKGGHYRKPSMFFSVSAQSKAI
DLAVDYINFFVKNPEAVLLLDVERGIPESAAMREVVAAKLDENGKVALAYVSGLGDLAGKLPPPPPAGAGEGELMLRNIA
EQVGFGQLSPSDGGKQLVTEITQILARG
>Mature_427_residues
SLRVSRRNFIAGGATLLSLSALGTSAFAQEKRLRLLWWGSQPRADRTNKVSQLYQTKNAGTSITGEFLGWGDYWPRLATQ
VAGRNAPDVIQMDYRYIVQYARRGALAPLESYMPAKLNLDDFDKAQIEGGSVDGHLYGVSLGANSAATVLNTTAFKEAGV
DLPTQATTWEEFGRMGAEITKAGKRKGMFGLADGSGGEPLFENWLRQRGKGLYTADGKIAFDVDDASEWYDMWAKFREAG
ACVPADIQALDKNDIETNTVSLGKAAAGFAHSNQFVAYQAMNKDKLALTNYMRIKADSKGGHYRKPSMFFSVSAQSKAID
LAVDYINFFVKNPEAVLLLDVERGIPESAAMREVVAAKLDENGKVALAYVSGLGDLAGKLPPPPPAGAGEGELMLRNIAE
QVGFGQLSPSDGGKQLVTEITQILARG

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46284; Mature: 46153

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRVSRRNFIAGGATLLSLSALGTSAFAQEKRLRLLWWGSQPRADRTNKVSQLYQTKNA
CCEECCCCCEEECCHHHHHHHHHCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
GTSITGEFLGWGDYWPRLATQVAGRNAPDVIQMDYRYIVQYARRGALAPLESYMPAKLNL
CCEECCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC
DDFDKAQIEGGSVDGHLYGVSLGANSAATVLNTTAFKEAGVDLPTQATTWEEFGRMGAEI
CCCCHHEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TKAGKRKGMFGLADGSGGEPLFENWLRQRGKGLYTADGKIAFDVDDASEWYDMWAKFREA
HHHHHHCCCEEECCCCCCCHHHHHHHHHHCCEEEEECCEEEEECCCHHHHHHHHHHHHHC
GACVPADIQALDKNDIETNTVSLGKAAAGFAHSNQFVAYQAMNKDKLALTNYMRIKADSK
CCCCCHHHHHCCCCCCCCCEEECCCHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEECCC
GGHYRKPSMFFSVSAQSKAIDLAVDYINFFVKNPEAVLLLDVERGIPESAAMREVVAAKL
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
DENGKVALAYVSGLGDLAGKLPPPPPAGAGEGELMLRNIAEQVGFGQLSPSDGGKQLVTE
CCCCCEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ITQILARG
HHHHHHCC
>Mature Secondary Structure 
SLRVSRRNFIAGGATLLSLSALGTSAFAQEKRLRLLWWGSQPRADRTNKVSQLYQTKNA
CEECCCCCEEECCHHHHHHHHHCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
GTSITGEFLGWGDYWPRLATQVAGRNAPDVIQMDYRYIVQYARRGALAPLESYMPAKLNL
CCEECCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC
DDFDKAQIEGGSVDGHLYGVSLGANSAATVLNTTAFKEAGVDLPTQATTWEEFGRMGAEI
CCCCHHEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TKAGKRKGMFGLADGSGGEPLFENWLRQRGKGLYTADGKIAFDVDDASEWYDMWAKFREA
HHHHHHCCCEEECCCCCCCHHHHHHHHHHCCEEEEECCEEEEECCCHHHHHHHHHHHHHC
GACVPADIQALDKNDIETNTVSLGKAAAGFAHSNQFVAYQAMNKDKLALTNYMRIKADSK
CCCCCHHHHHCCCCCCCCCEEECCCHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEECCC
GGHYRKPSMFFSVSAQSKAIDLAVDYINFFVKNPEAVLLLDVERGIPESAAMREVVAAKL
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
DENGKVALAYVSGLGDLAGKLPPPPPAGAGEGELMLRNIAEQVGFGQLSPSDGGKQLVTE
CCCCCEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ITQILARG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]