Click here to switch to the map view.

The map label for this gene is ycfS [C]

Identifier: 209551558

GI number: 209551558

Start: 4140156

End: 4140839

Strand: Reverse

Name: ycfS [C]

Synonym: Rleg2_3987

Alternate gene names: 209551558

Gene position: 4140839-4140156 (Counterclockwise)

Preceding gene: 209551560

Following gene: 209551552

Centisome position: 91.25

GC content: 63.89

Gene sequence:

>684_bases
ATGCGCATCCGCAATGCATTCCCGGTATTTGGCCTGCTGACGACGCTCGCACTGGCCGGTTGCTCCACAAATTCAGACAG
CGCATCCGTCGACGACAAGGGCGCAGGCCCGACCGTACAGACAGCCCAGATTTTCAACGACGCCTATGGCGTGACGAAGG
ATGCCGGGTACTCTCTGCCGGCGATCCCGATCGACCGGGTCAAGCCGCAGTTCCGCCGCCAGGTCGTCAGCTACCAGACC
ACCGAGCGCCCGGGTACGATCATCGTCAACACGCGCGAGCGCTTCCTCTATTACATCCTCGCCAACGGCAAGGCGATGCG
TTACGGCATCGGCGTCGGCAAGCAGGGCTTCGCATGGGCCGGCACCGCCTACGTCGCCTGGAAGCAGGAATGGCCGACCT
GGCACCCGCCGAAGGAAATGGCCGTTCGCCGCCCTGACGTCGCCAAATATGTCGAGGACGGCATGGGCCCGGGCCTCAGC
AATCCGCTCGGCGCGCGCGCCATGTATCTCTTCAACGAGGATGGCAAGGACACGCTGTTCCGCCTGCACGGCACGCCGGA
ATGGGCCTCGATCGGCACCGCCGCTTCCTCGGGCTGCATTCGCCTGATGAACCAGGACGTGATCGATCTTTATAGCCGCG
TCCGTCCCGGCAAGGGCACGTCCAAGGTCGTCGTCATCCAGTAA

Upstream 100 bases:

>100_bases
CTGCAGTAGCCTTGCAATGCGCAAGTTAATCGAAAATAAACCATAATCAACGATGGTCGAAAGACTGTTCTCCCTTGCCC
TAAAACTTCAAGAGTCATCT

Downstream 100 bases:

>100_bases
AGTAGATATCGAATTCGGTATAAAAAAGGCCGCCGGACTGTCGTCTCGGCGGCCTTTTCATATTCAAAACGATACTCTCA
ACCGGCCTGCTTCGCCTTCA

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; ErfK/YbiS/YhnG Oxidoreductase; Protein Ybis; Twin-Arginine Translocation Pathway Signal; ErfK/YbiS/YcfS/YnhG Family Protein/Tat Domain Protein; Carnitine Operon Oxidoreductase; Carnitine Operon Oxidoreductase CaiA; ATP Synthase Subunit; Protein ErfK/SrfK; ErfK/YbiS/YcfS/YnhG Superfamily; ErfK/YbiS/YhnG Protein; Signal Peptide Protein; Exported ErfK/YbiS/YhnG Family Protein; Exported ErfK/YbiS/YhnG Protein; ErfK/YbiS/YhnG Family Protein

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRIRNAFPVFGLLTTLALAGCSTNSDSASVDDKGAGPTVQTAQIFNDAYGVTKDAGYSLPAIPIDRVKPQFRRQVVSYQT
TERPGTIIVNTRERFLYYILANGKAMRYGIGVGKQGFAWAGTAYVAWKQEWPTWHPPKEMAVRRPDVAKYVEDGMGPGLS
NPLGARAMYLFNEDGKDTLFRLHGTPEWASIGTAASSGCIRLMNQDVIDLYSRVRPGKGTSKVVVIQ

Sequences:

>Translated_227_residues
MRIRNAFPVFGLLTTLALAGCSTNSDSASVDDKGAGPTVQTAQIFNDAYGVTKDAGYSLPAIPIDRVKPQFRRQVVSYQT
TERPGTIIVNTRERFLYYILANGKAMRYGIGVGKQGFAWAGTAYVAWKQEWPTWHPPKEMAVRRPDVAKYVEDGMGPGLS
NPLGARAMYLFNEDGKDTLFRLHGTPEWASIGTAASSGCIRLMNQDVIDLYSRVRPGKGTSKVVVIQ
>Mature_227_residues
MRIRNAFPVFGLLTTLALAGCSTNSDSASVDDKGAGPTVQTAQIFNDAYGVTKDAGYSLPAIPIDRVKPQFRRQVVSYQT
TERPGTIIVNTRERFLYYILANGKAMRYGIGVGKQGFAWAGTAYVAWKQEWPTWHPPKEMAVRRPDVAKYVEDGMGPGLS
NPLGARAMYLFNEDGKDTLFRLHGTPEWASIGTAASSGCIRLMNQDVIDLYSRVRPGKGTSKVVVIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787356, Length=145, Percent_Identity=33.1034482758621, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24911; Mature: 24911

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRNAFPVFGLLTTLALAGCSTNSDSASVDDKGAGPTVQTAQIFNDAYGVTKDAGYSLP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
AIPIDRVKPQFRRQVVSYQTTERPGTIIVNTRERFLYYILANGKAMRYGIGVGKQGFAWA
CCCHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCCCEEC
GTAYVAWKQEWPTWHPPKEMAVRRPDVAKYVEDGMGPGLSNPLGARAMYLFNEDGKDTLF
CEEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEE
RLHGTPEWASIGTAASSGCIRLMNQDVIDLYSRVRPGKGTSKVVVIQ
EEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
>Mature Secondary Structure
MRIRNAFPVFGLLTTLALAGCSTNSDSASVDDKGAGPTVQTAQIFNDAYGVTKDAGYSLP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
AIPIDRVKPQFRRQVVSYQTTERPGTIIVNTRERFLYYILANGKAMRYGIGVGKQGFAWA
CCCHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCCCEEC
GTAYVAWKQEWPTWHPPKEMAVRRPDVAKYVEDGMGPGLSNPLGARAMYLFNEDGKDTLF
CEEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEE
RLHGTPEWASIGTAASSGCIRLMNQDVIDLYSRVRPGKGTSKVVVIQ
EEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA