| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551523
Identifier: 209551523
GI number: 209551523
Start: 4100771
End: 4101529
Strand: Direct
Name: 209551523
Synonym: Rleg2_3952
Alternate gene names: NA
Gene position: 4100771-4101529 (Clockwise)
Preceding gene: 209551522
Following gene: 209551524
Centisome position: 90.37
GC content: 63.11
Gene sequence:
>759_bases ATGTTCTCGCTTCTGAAGACAAGGCCGAAAGCGCGGAAACCGGCGCCGCCCGAAACCCGGACGCTTGAGGTGGCCGGCCG GCTGATGCCGTTGACCATCAAGCAGCATGACCGGGCGACGCGCATCACCTTGCGCATCGAGCCGGGCGGCCGGGCCTTGA AGATGACGGTGCCGAAAGGTCTTGCGGCGCGCGAGGTCAATGCCTTTCTCGATCGGCACCAGGGTTGGCTGCTGACCAAA CTTGCCAAGTTTTCGACCGATGCCGGCTTGCGCGACGGCGGCGAAATTCTCTTTCGCGGCGTGTCCCATCGCATTCAGCA TAGCGGCAGCTTGCGTGGGCTGACGGAGGCGGTTTTGGTGGACGGCAGACCGGTGCTGCGGGTCAGCGGAATGGAGGAAC ATGTCGGACGGCGCATCGCGGCCTTTCTCAAGAAGGAAGCGCGCGCCGAGCTCGTGAAGCTGGCGACCATGCACGCCGCA GCGATCCGGGCGCCGATCCGCTCGATCTCGATGAAGGATACGCGTAGCCGCTGGGGCTCGTGCTCGTCGGAAGGGAATCT GAGCTTTTCCTGGCGCATCGTCATGGCGCCGCCCTCGGTGATCGATTATCTCGCCGCCCATGAGGTTGCCCATCTCAAGG AGATGAACCACGGCCCTCACTTCTGGGCGCTTTGCAAGAAGCTTTGCCCCGGCATGGAGGAAGCGAAATCCTGGCTGAAG CGGCACGGAAGCCAGCTGCACGCCATTGATTTCGACTGA
Upstream 100 bases:
>100_bases CCAGACGCCTTGAAGGCCTGAACGCTGAATTGATGACCGGCATCTTCCGATGCCGGTTTTTCTATGTCCGTTCCCCCGGC GAATCGGATAGAAAACACCC
Downstream 100 bases:
>100_bases TCGACGTTGGCGCTAAATGCAGCCTAGCACGCAAATTGGCTCGACTCTTGCTGCATTTCGTGTCACTTCGCTGCCATGAA ACCCGATATCAAGATCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc-Dependent Protease; Zinc Metallopeptidase; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Zinc Metallopeptidase-Like Protein; Hydrolase; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MFSLLKTRPKARKPAPPETRTLEVAGRLMPLTIKQHDRATRITLRIEPGGRALKMTVPKGLAAREVNAFLDRHQGWLLTK LAKFSTDAGLRDGGEILFRGVSHRIQHSGSLRGLTEAVLVDGRPVLRVSGMEEHVGRRIAAFLKKEARAELVKLATMHAA AIRAPIRSISMKDTRSRWGSCSSEGNLSFSWRIVMAPPSVIDYLAAHEVAHLKEMNHGPHFWALCKKLCPGMEEAKSWLK RHGSQLHAIDFD
Sequences:
>Translated_252_residues MFSLLKTRPKARKPAPPETRTLEVAGRLMPLTIKQHDRATRITLRIEPGGRALKMTVPKGLAAREVNAFLDRHQGWLLTK LAKFSTDAGLRDGGEILFRGVSHRIQHSGSLRGLTEAVLVDGRPVLRVSGMEEHVGRRIAAFLKKEARAELVKLATMHAA AIRAPIRSISMKDTRSRWGSCSSEGNLSFSWRIVMAPPSVIDYLAAHEVAHLKEMNHGPHFWALCKKLCPGMEEAKSWLK RHGSQLHAIDFD >Mature_252_residues MFSLLKTRPKARKPAPPETRTLEVAGRLMPLTIKQHDRATRITLRIEPGGRALKMTVPKGLAAREVNAFLDRHQGWLLTK LAKFSTDAGLRDGGEILFRGVSHRIQHSGSLRGLTEAVLVDGRPVLRVSGMEEHVGRRIAAFLKKEARAELVKLATMHAA AIRAPIRSISMKDTRSRWGSCSSEGNLSFSWRIVMAPPSVIDYLAAHEVAHLKEMNHGPHFWALCKKLCPGMEEAKSWLK RHGSQLHAIDFD
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28111; Mature: 28111
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLLKTRPKARKPAPPETRTLEVAGRLMPLTIKQHDRATRITLRIEPGGRALKMTVPKG CCCCHHCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCEEEEEEEECCCCCEEEEECCCC LAAREVNAFLDRHQGWLLTKLAKFSTDAGLRDGGEILFRGVSHRIQHSGSLRGLTEAVLV CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHEEE DGRPVLRVSGMEEHVGRRIAAFLKKEARAELVKLATMHAAAIRAPIRSISMKDTRSRWGS CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC CSSEGNLSFSWRIVMAPPSVIDYLAAHEVAHLKEMNHGPHFWALCKKLCPGMEEAKSWLK CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH RHGSQLHAIDFD HCCCEEEEECCC >Mature Secondary Structure MFSLLKTRPKARKPAPPETRTLEVAGRLMPLTIKQHDRATRITLRIEPGGRALKMTVPKG CCCCHHCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCEEEEEEEECCCCCEEEEECCCC LAAREVNAFLDRHQGWLLTKLAKFSTDAGLRDGGEILFRGVSHRIQHSGSLRGLTEAVLV CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHEEE DGRPVLRVSGMEEHVGRRIAAFLKKEARAELVKLATMHAAAIRAPIRSISMKDTRSRWGS CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC CSSEGNLSFSWRIVMAPPSVIDYLAAHEVAHLKEMNHGPHFWALCKKLCPGMEEAKSWLK CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH RHGSQLHAIDFD HCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA