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The map label for this gene is 209551521

Identifier: 209551521

GI number: 209551521

Start: 4098827

End: 4100104

Strand: Direct

Name: 209551521

Synonym: Rleg2_3950

Alternate gene names: NA

Gene position: 4098827-4100104 (Clockwise)

Preceding gene: 209551520

Following gene: 209551522

Centisome position: 90.32

GC content: 59.15

Gene sequence:

>1278_bases
TTGTTTTATCAGCTTTATGAATTGAACCATGCCGCCATGGCGCCGTTTCGCGCCGCGGCTGATATCATGCGATTTGCCTA
TGCCAATCCGCTGAACCCGTTTTCCCATACGCCACTCGGCCGGACGATGGCGGCCAGCCTCGAAATGTTCGAACGCACGA
CGCGCCGTTACGGCAAGCCGGAATTCGGACTGAAGCAGACGACGATCGGCGATCGGGTGGTTTCCGTCCGCGAAGAGATC
GTCTGGTCGCGGCCCTTCTGCAATCTCCTGCATTTCGCCCGCAATGCTCCAGCCGCCCGCGGCAACGATCCGCGCATTCT
GATTGTTGCGCCGATGTCCGGCCACTATGCGACGCTGCTACGCGGTACGGTGGAGGCGCTGTTGCCGAGTGCCGATGTCT
ACATCACCGACTGGATCGATGCCCGCATGGTGCCGATGACGGAAGGCACCTTCGATTTCGACGACTATGTCGATTACGTC
ATCGAGATGCTGCATTTCCTCGGTCACGACACACATGTCATCGCCGTCTGTCAGCCTTCCGTTCCGGTATTGGCTGCGGC
TGCGGTGATGGAGGAAGCCAATGATCCGCTGTCGCCGGCGTCGATGACGCTGATGGGCGGCCCGATCGACACGCGCATCA
ATCCGACGGCGGTCAACAAACTCGCCCAAGAGCGGTCGCTGCAGTGGTTCTCCGACAATGTCATCATGAACGTGCCCTGG
CCGCAGCCGGGCTTCATGCGCCCGGTCTATCCGGGATTCCTGCAGCTTTCGGGATTCATGTCGATGAATCTCGACCGGCA
TCTCGTCGCGCACAAGGAATTCTTCATGCATCTCGTGAAGAACGACGGCGAACCGGAAAAACATCGCGATTTCTACGACG
AATATCTCGCCGTCATGGATCTGACCGCCGAATTCTACCTGCAGACGGTCGAGCAGGTCTTCATCAAGCATTCCCTGCCG
AAGGGCGAACTGATGCATCGCGGCAAACGTGTCGATCCGGCAGCGATCCGCAAGGTGGCGCTTCTGACCGTCGAAGGTGA
GAATGACGATATCTCGGGGGTCGGCCAGACCAAGGCGGCGCAGACGATCTGCGTCAACATTCCCGAAGATATGCGCATGC
ATTATCTGCAGCCGGATGTTGGCCATTATGGTGTTTTCAACGGCTCGCGGTTCCGCCGCGAGATCGCGCCGCGTATCCTC
GATTTCGTCCGTCAGCATTCCCGTTCTGCCGTCAAGCCTCCGGTCCCGCGTGTCATCAAGGGCGGTCGGACAGCCTAA

Upstream 100 bases:

>100_bases
TGCAACAAAAAACTGTTAGTCTGCATTACGTGCCCGCGTAACGAAAAGAGTCGATGCCGCTCAATCGGCGTCATCTTTTC
GATAGAGAAAGGTGGCGCTT

Downstream 100 bases:

>100_bases
ATCAGGCGTAGCTGAATTAGCAAAACGGATTCAAGGCCTTGTCCGATTTCACGGGCAATCGTCTTGAAGGTCGTTATCGC
GGTTACCACATCGATTTCAG

Product: polyhydroxyalkanoate depolymerase, intracellular

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Poly(3-Hydroxyalkanoate)Synthetase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase Domain Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MFYQLYELNHAAMAPFRAAADIMRFAYANPLNPFSHTPLGRTMAASLEMFERTTRRYGKPEFGLKQTTIGDRVVSVREEI
VWSRPFCNLLHFARNAPAARGNDPRILIVAPMSGHYATLLRGTVEALLPSADVYITDWIDARMVPMTEGTFDFDDYVDYV
IEMLHFLGHDTHVIAVCQPSVPVLAAAAVMEEANDPLSPASMTLMGGPIDTRINPTAVNKLAQERSLQWFSDNVIMNVPW
PQPGFMRPVYPGFLQLSGFMSMNLDRHLVAHKEFFMHLVKNDGEPEKHRDFYDEYLAVMDLTAEFYLQTVEQVFIKHSLP
KGELMHRGKRVDPAAIRKVALLTVEGENDDISGVGQTKAAQTICVNIPEDMRMHYLQPDVGHYGVFNGSRFRREIAPRIL
DFVRQHSRSAVKPPVPRVIKGGRTA

Sequences:

>Translated_425_residues
MFYQLYELNHAAMAPFRAAADIMRFAYANPLNPFSHTPLGRTMAASLEMFERTTRRYGKPEFGLKQTTIGDRVVSVREEI
VWSRPFCNLLHFARNAPAARGNDPRILIVAPMSGHYATLLRGTVEALLPSADVYITDWIDARMVPMTEGTFDFDDYVDYV
IEMLHFLGHDTHVIAVCQPSVPVLAAAAVMEEANDPLSPASMTLMGGPIDTRINPTAVNKLAQERSLQWFSDNVIMNVPW
PQPGFMRPVYPGFLQLSGFMSMNLDRHLVAHKEFFMHLVKNDGEPEKHRDFYDEYLAVMDLTAEFYLQTVEQVFIKHSLP
KGELMHRGKRVDPAAIRKVALLTVEGENDDISGVGQTKAAQTICVNIPEDMRMHYLQPDVGHYGVFNGSRFRREIAPRIL
DFVRQHSRSAVKPPVPRVIKGGRTA
>Mature_425_residues
MFYQLYELNHAAMAPFRAAADIMRFAYANPLNPFSHTPLGRTMAASLEMFERTTRRYGKPEFGLKQTTIGDRVVSVREEI
VWSRPFCNLLHFARNAPAARGNDPRILIVAPMSGHYATLLRGTVEALLPSADVYITDWIDARMVPMTEGTFDFDDYVDYV
IEMLHFLGHDTHVIAVCQPSVPVLAAAAVMEEANDPLSPASMTLMGGPIDTRINPTAVNKLAQERSLQWFSDNVIMNVPW
PQPGFMRPVYPGFLQLSGFMSMNLDRHLVAHKEFFMHLVKNDGEPEKHRDFYDEYLAVMDLTAEFYLQTVEQVFIKHSLP
KGELMHRGKRVDPAAIRKVALLTVEGENDDISGVGQTKAAQTICVNIPEDMRMHYLQPDVGHYGVFNGSRFRREIAPRIL
DFVRQHSRSAVKPPVPRVIKGGRTA

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48018; Mature: 48018

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYQLYELNHAAMAPFRAAADIMRFAYANPLNPFSHTPLGRTMAASLEMFERTTRRYGKP
CEEEEEECCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
EFGLKQTTIGDRVVSVREEIVWSRPFCNLLHFARNAPAARGNDPRILIVAPMSGHYATLL
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHH
RGTVEALLPSADVYITDWIDARMVPMTEGTFDFDDYVDYVIEMLHFLGHDTHVIAVCQPS
HHHHHHHCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
VPVLAAAAVMEEANDPLSPASMTLMGGPIDTRINPTAVNKLAQERSLQWFSDNVIMNVPW
CHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCCEEEECCC
PQPGFMRPVYPGFLQLSGFMSMNLDRHLVAHKEFFMHLVKNDGEPEKHRDFYDEYLAVMD
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LTAEFYLQTVEQVFIKHSLPKGELMHRGKRVDPAAIRKVALLTVEGENDDISGVGQTKAA
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHCEEEEEEEECCCCCCCCCCCCCCC
QTICVNIPEDMRMHYLQPDVGHYGVFNGSRFRREIAPRILDFVRQHSRSAVKPPVPRVIK
CEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC
GGRTA
CCCCC
>Mature Secondary Structure
MFYQLYELNHAAMAPFRAAADIMRFAYANPLNPFSHTPLGRTMAASLEMFERTTRRYGKP
CEEEEEECCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
EFGLKQTTIGDRVVSVREEIVWSRPFCNLLHFARNAPAARGNDPRILIVAPMSGHYATLL
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHH
RGTVEALLPSADVYITDWIDARMVPMTEGTFDFDDYVDYVIEMLHFLGHDTHVIAVCQPS
HHHHHHHCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
VPVLAAAAVMEEANDPLSPASMTLMGGPIDTRINPTAVNKLAQERSLQWFSDNVIMNVPW
CHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCCEEEECCC
PQPGFMRPVYPGFLQLSGFMSMNLDRHLVAHKEFFMHLVKNDGEPEKHRDFYDEYLAVMD
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LTAEFYLQTVEQVFIKHSLPKGELMHRGKRVDPAAIRKVALLTVEGENDDISGVGQTKAA
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHCEEEEEEEECCCCCCCCCCCCCCC
QTICVNIPEDMRMHYLQPDVGHYGVFNGSRFRREIAPRILDFVRQHSRSAVKPPVPRVIK
CEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC
GGRTA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA