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The map label for this gene is ybeB [H]

Identifier: 209551453

GI number: 209551453

Start: 4023185

End: 4023628

Strand: Direct

Name: ybeB [H]

Synonym: Rleg2_3882

Alternate gene names: 209551453

Gene position: 4023185-4023628 (Clockwise)

Preceding gene: 209551451

Following gene: 209551454

Centisome position: 88.66

GC content: 57.88

Gene sequence:

>444_bases
ATGGTTTGTCATTCCAGGAAAGGGAAAGCACTGACAACAGTACACGCCAAGGGAAAAACGTTCGCCGTTATCCCGAAGAG
TGCGGAACGTGGCGCCGATGCCGCCGCCCGTGCCCTAGAAACCGTCCTCGCCAGCCTCGAGGACTCCAAAGCTGAAGATA
TCGTCACCATCGACATTGCCGGAAAATCGGCGCTGGGAGACTACATGATCGTCGTCTCCGGCCGCTCGAACAGGCACGTC
ATGGCGATCTCGGATCACCTGCTCACCGACCTGAAGGACGACGGCCTCGGCACAGCCCGCGTCGAAGGTCAGGAGGGCGG
CGATTGGGTGCTGATCGACACCGGTGACATTATCGTGCATGTGTTCCGTCCTGAAATCCGCGAGTTCTACAACATCGAAA
AGATGTGGGCGGCTCCGGATATGGATGAAGAAACACGGCACTGA

Upstream 100 bases:

>100_bases
CGGATTTTCGACCGTTCTGTATCTTAGCACGTCTTGAAACATTAATGGTTTGATGCCTATCTTAACCATGATCCGGTCTC
GATCGGATCTCGTGTTGTGC

Downstream 100 bases:

>100_bases
CAGGCGGGCCGGCATTCTGTCCGGCGCCTGAGCGTGGCATTGGCTGGCCGGAGACATGAAAACCGGCCGGCGGCGCCTTG
TGCGCCCGATGTGCCGCATC

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MVCHSRKGKALTTVHAKGKTFAVIPKSAERGADAAARALETVLASLEDSKAEDIVTIDIAGKSALGDYMIVVSGRSNRHV
MAISDHLLTDLKDDGLGTARVEGQEGGDWVLIDTGDIIVHVFRPEIREFYNIEKMWAAPDMDEETRH

Sequences:

>Translated_147_residues
MVCHSRKGKALTTVHAKGKTFAVIPKSAERGADAAARALETVLASLEDSKAEDIVTIDIAGKSALGDYMIVVSGRSNRHV
MAISDHLLTDLKDDGLGTARVEGQEGGDWVLIDTGDIIVHVFRPEIREFYNIEKMWAAPDMDEETRH
>Mature_147_residues
MVCHSRKGKALTTVHAKGKTFAVIPKSAERGADAAARALETVLASLEDSKAEDIVTIDIAGKSALGDYMIVVSGRSNRHV
MAISDHLLTDLKDDGLGTARVEGQEGGDWVLIDTGDIIVHVFRPEIREFYNIEKMWAAPDMDEETRH

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=109, Percent_Identity=29.3577981651376, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI87081768, Length=96, Percent_Identity=42.7083333333333, Blast_Score=98, Evalue=3e-22,
Organism=Drosophila melanogaster, GI19923046, Length=112, Percent_Identity=30.3571428571429, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 16044; Mature: 16044

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCHSRKGKALTTVHAKGKTFAVIPKSAERGADAAARALETVLASLEDSKAEDIVTIDIA
CCCCCCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
GKSALGDYMIVVSGRSNRHVMAISDHLLTDLKDDGLGTARVEGQEGGDWVLIDTGDIIVH
CCCCCCCEEEEEECCCCCEEEEECCHHHHCCCCCCCCEEEEECCCCCCEEEEECCCEEEE
VFRPEIREFYNIEKMWAAPDMDEETRH
EECHHHHHHHCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVCHSRKGKALTTVHAKGKTFAVIPKSAERGADAAARALETVLASLEDSKAEDIVTIDIA
CCCCCCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
GKSALGDYMIVVSGRSNRHVMAISDHLLTDLKDDGLGTARVEGQEGGDWVLIDTGDIIVH
CCCCCCCEEEEEECCCCCEEEEECCHHHHCCCCCCCCEEEEECCCCCCEEEEECCCEEEE
VFRPEIREFYNIEKMWAAPDMDEETRH
EECHHHHHHHCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]