| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is modE [C]
Identifier: 209551452
GI number: 209551452
Start: 4022616
End: 4022975
Strand: Reverse
Name: modE [C]
Synonym: Rleg2_3881
Alternate gene names: 209551452
Gene position: 4022975-4022616 (Counterclockwise)
Preceding gene: 209551459
Following gene: 209551444
Centisome position: 88.65
GC content: 63.61
Gene sequence:
>360_bases ATGACCGATCCAGCCGCCAAAACACTCGTGCCCGTCCTGCGAATCAGCTTCCCGGATGAGGATCGGCTCGGTCACGGCAA GATGGAGCTCTTGGAGCATATCCGCGCGACCGGGTCGATCTCGGCGGCGGGGCGGGCAATGGACATGTCCTATCGCCGCG CATGGCTGCTGGTCAGCGAGATGAACCGGATGTTTTGCGAACAGGTGGTCGAGCCGCAGCGCGGCGGCCAGAAGGGCGGC GGCGCGGCGCTGACGCCGTTCGGTGAGGAATTGCTGGACCGTTTCCGCCGAATGGAGAAGACGATGCGCGAAAGCCTCGC CGAGGATCTTGCCTGGCTCGAAGCAAAACGCAGTCTGTAA
Upstream 100 bases:
>100_bases CCGAATTGAAGAATATTGCCGCGCGGGCTGCTTGTGGGGGCGGTGTACAGTTTCCGTACCGCGGCGTAAAGTGCGGCAAA TTTCACGATTTCACGATTCG
Downstream 100 bases:
>100_bases GGAACCTCAGGCCTCCAGAGCAACCGTCTTGATGACGGCGAAGACGGTCTTGCCTGGGCGAAGATCGAGGCGCTCGCAGG ACAGCGCGGTGATGCGGGAA
Product: ModE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ModE Family; LysR Family Transcriptional Regulator; Molybdenum Transport Regulatory Protein ModE; Transcriptional Regulator ModE; Molybdenum Transporter; Transcriptional Regulatory Protein LysR Family; MopB-Like Protein; Transcriptional Regulator LysR Family Protein; Regulatory Protein; Helix-Turn-Helix Domain Protein; LysR Family Regulatory Protein; Molybdenum Transport Regulator Protein; Transcriptional Regulator ModE Family Protein; Molybdenum Transport Regulator
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTDPAAKTLVPVLRISFPDEDRLGHGKMELLEHIRATGSISAAGRAMDMSYRRAWLLVSEMNRMFCEQVVEPQRGGQKGG GAALTPFGEELLDRFRRMEKTMRESLAEDLAWLEAKRSL
Sequences:
>Translated_119_residues MTDPAAKTLVPVLRISFPDEDRLGHGKMELLEHIRATGSISAAGRAMDMSYRRAWLLVSEMNRMFCEQVVEPQRGGQKGG GAALTPFGEELLDRFRRMEKTMRESLAEDLAWLEAKRSL >Mature_118_residues TDPAAKTLVPVLRISFPDEDRLGHGKMELLEHIRATGSISAAGRAMDMSYRRAWLLVSEMNRMFCEQVVEPQRGGQKGGG AALTPFGEELLDRFRRMEKTMRESLAEDLAWLEAKRSL
Specific function: The Mode-mO Complex Acts As A Repressor Of The Modabc Operon, Involved In The Transport Of Molybdate. Upon Binding Molybdate, The Conformation Of The Protein Changes, Promoting Dimerization Of Mode-mO. The Protein Dimer Is Then Competent To Bind A DNA Reg
COG id: COG2005
COG function: function code R; N-terminal domain of molybdenum-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13423; Mature: 13292
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPAAKTLVPVLRISFPDEDRLGHGKMELLEHIRATGSISAAGRAMDMSYRRAWLLVSE CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MNRMFCEQVVEPQRGGQKGGGAALTPFGEELLDRFRRMEKTMRESLAEDLAWLEAKRSL HHHHHHHHHHCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDPAAKTLVPVLRISFPDEDRLGHGKMELLEHIRATGSISAAGRAMDMSYRRAWLLVSE CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MNRMFCEQVVEPQRGGQKGGGAALTPFGEELLDRFRRMEKTMRESLAEDLAWLEAKRSL HHHHHHHHHHCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA